Limnohabitans sp. 103DPR2: L103DPR2_01515
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Entry
L103DPR2_01515 CDS
T04120
Symbol
ligB_2
Name
(GenBank) Protocatechuate 4,5-dioxygenase beta chain
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim00362
Benzoate degradation
lim00624
Polycyclic aromatic hydrocarbon degradation
lim00627
Aminobenzoate degradation
lim01100
Metabolic pathways
lim01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
L103DPR2_01515 (ligB_2)
00627 Aminobenzoate degradation
L103DPR2_01515 (ligB_2)
00624 Polycyclic aromatic hydrocarbon degradation
L103DPR2_01515 (ligB_2)
Enzymes [BR:
lim01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
L103DPR2_01515 (ligB_2)
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Motif
Pfam:
LigB
Memo
Motif
Other DBs
NCBI-ProteinID:
ALK91916
UniProt:
A0A0P0MF84
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All DBs
Position
1546154..1546999
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AA seq
281 aa
AA seq
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MAKLMGGLATSHIPAIGSAIHKGIQQEPYWKPFFDGYPPVQNWLKNAKPDVVVVFYNDHG
LNFFLDKMPTFAVGAAAQYNNADEGWGIPTLPPFQGNTALSWHLINHLVAHDFDVTTCQE
MLVDHACTLPLKLFWPDGPCPVQVVPICINTVQFPLPSAKRVYALGKAVGEAIAQWPSDH
KVAVVASGGLSHQLDGERAGFINKAFDLEFMDSLVSNPEWATQFNTLQLVEKTGTQGVEL
LMWLAMRAALSSASGRVREVHRNYHIPISNTATGLMAFSVD
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaactcatgggtggcttggccacatctcacattcccgccattggcagcgctatc
cacaaaggtattcagcaagaaccatattggaagccttttttcgatggctatccaccggtg
caaaattggctaaaaaatgcaaagcctgacgtggtggtggtgttctacaacgaccatggt
ttgaattttttcctggacaaaatgccgacgttcgcagtcggcgcagccgcgcagtacaac
aatgcagacgaaggctggggcattccaaccttgccaccattccaaggcaatacggccctg
tcatggcatttgatcaatcacttggtggcccatgactttgatgtcaccacctgccaagaa
atgctggtggaccatgcgtgcaccttgcccttgaagttgttctggcctgatggtccttgc
cctgttcaagtggtgcccatttgcatcaacacggttcagtttcctttgccatcggccaag
cgggtgtatgcgttgggcaaagctgtcggtgaagccattgcgcaatggccctctgatcac
aaggtggcggtggtggcctctggcggtttaagccatcagctggacggcgagcgagctggc
ttcatcaacaaggcctttgatttggagttcatggacagcttggtcagcaatcccgaatgg
gccacgcagttcaataccttgcagctggttgagaaaacgggtactcagggcgtggaactc
ttgatgtggctggccatgcgtgccgcgttaagcagcgcttcgggccgggttcgtgaagtg
catcgcaactaccacatccccatctccaatacggccacaggtctgatggcgttttctgtg
gattga
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