Limnohabitans sp. 103DPR2: L103DPR2_02108
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Entry
L103DPR2_02108 CDS
T04120
Symbol
lcfB_1
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K18661
malonyl-CoA/methylmalonyl-CoA synthetase [EC:
6.2.1.76
6.2.1.-]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim00280
Valine, leucine and isoleucine degradation
lim01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
L103DPR2_02108 (lcfB_1)
Enzymes [BR:
lim01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.76 malonate---CoA ligase
L103DPR2_02108 (lcfB_1)
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF2428
Motif
Other DBs
NCBI-ProteinID:
ALK92500
UniProt:
A0A0P0MHY8
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All DBs
Position
complement(2184280..2185824)
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AA seq
514 aa
AA seq
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MAQENLFAALRAAFPSNLDAIAVETDHGLNYSWRDLDRASAMMANLLEGLKLPKGSRIAV
QVEKSVEAMMLYLATLRAGYVFLPLNTAYQSAEIEYFIGNAEPAVVVCTSANFGWVSKIA
FKAGTQHVFTLNDDRTGSLLERAVHQKDQHKIAVKDADDLAAILYTSGTTGRSKGAMLTH
GNMLSNAQTLKTYWGWKKGDVLIHALPIFHVHGLFVAIHGALINGSKMIWMAKFDPKFVI
AKMPEATVFMGVPTLYVRLLAEPGLTKQAARNMRLFIAGSAPLLIETFTEWQQRTGHTIL
ERYGMSETVMLTSNPYAADKRHGGQSERRGGTVGFPLPGVKLRVQGDDGKALPVGEIGNI
QVKGPNVFQAYWRMPEKTKEEFTSDGYFKTGDVGKIDERGYVTIVGRSKDLIISGGYNVY
PAEIEGYINEMPGVAESALVGVPHPDFGEVGVAIVIAKAGAQLNADHIIATLKSQLANFK
IPKKCFVVPELPRNTMGKVQKNLLRDQHKNLFSA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagagaatttgtttgcggccctgcgtgcggcatttccatccaacctagatgcc
atcgcagttgaaacagaccatggcttgaattacagctggcgcgacctggaccgtgccagt
gccatgatggccaatctgttggagggcttgaagttgcccaaaggcagtcgcattgcggta
caggttgagaagtcagtggaagctatgatgctgtacctggccacactgcgggcagggtat
gtctttttaccattgaacacagcctatcaaagcgctgagattgaatacttcattggcaat
gccgaacctgctgtggtggtttgcaccagcgccaattttggatgggtcagcaagattgct
ttcaaggctggcacgcaacacgtcttcaccctgaacgacgatcgcacgggcagcctgctt
gagcgcgccgttcaccaaaaagaccagcacaagattgccgtcaaagatgctgatgatttg
gccgccattttgtacaccagtggcaccacgggccgcagcaaaggcgccatgctgacgcac
ggcaacatgttgagcaacgcccaaacactcaagacctattggggttggaaaaagggcgat
gtgctcatccatgcattgcctatttttcatgtgcatggcttgtttgtggccattcatggc
gcgctcatcaacggcagcaaaatgatttggatggccaagtttgaccccaaatttgtcatt
gccaaaatgcccgaagccactgtcttcatgggtgtgcctactttgtatgtgcgcctcttg
gctgagcctggtttgacaaagcaagctgcacgcaacatgcgcttgttcattgcaggctct
gcacctttgttgattgaaactttcactgagtggcaacaacgcacagggcacaccattttg
gagcgttacggcatgagcgaaaccgtcatgctcacctccaatccttatgcagcagacaaa
cgccatggcggccaaagcgagcgacgcggcggtaccgtaggtttcccattgcctggcgtg
aagttacgggtgcaaggcgacgatggcaaggctttgcctgtgggtgagattggcaacatt
caggtcaaaggcccgaacgtgtttcaagcctactggcgcatgcccgagaaaaccaaagaa
gaattcacttcagatggttatttcaaaacaggtgatgtgggcaaaatcgacgagcgtggc
tatgtgaccattgtggggcgcagcaaagacttgatcatcagtggaggctacaacgtttac
ccggccgagattgaaggctacatcaatgaaatgccaggcgtggctgaaagcgccttggtg
ggtgtgccccatccagactttggcgaagtgggtgtggccattgtgattgccaaggcaggt
gcgcaattgaatgcagatcacatcattgccactttgaaatcgcaattggccaatttcaag
atccccaaaaagtgtttcgtggtgccggagctgccacgaaacaccatgggcaaagtgcag
aaaaatttattgcgcgatcagcacaaaaatttattctcagcgtaa
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