Limnohabitans sp. INBF002: LINBF2_10760
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Entry
LINBF2_10760 CDS
T09962
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
limi
Limnohabitans sp. INBF002
Brite
KEGG Orthology (KO) [BR:
limi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
limi03009
]
LINBF2_10760 (rimO)
Enzymes [BR:
limi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
LINBF2_10760 (rimO)
Ribosome biogenesis [BR:
limi03009
]
Prokaryotic type
ribosomal protein modification factors
LINBF2_10760 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
BDU52841
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Position
1066865..1068244
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AA seq
459 aa
AA seq
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MTEVTTPKVGFVSLGCPKALTDSELILTQLSAEGYQTSKTFAGADLVIVNTCGFIDDAVK
ESLDTIGEALAENGKVIVTGCLGARQGEGGSNLVMQMHPSVLAVTGPHATQEVMDAVHAH
LPKPHDPFIDLVPNSFGEAGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGD
VLKEARALFEGGVKELLVISQDTSAYGVDVKYVTGFFDGQPIKTRTLELAQALAKLAQTY
GAWVRLHYVYPYPSVDDIIPLMATGHVLPYLDVPFQHSHPDVLKRMKRPASGEKNLERIA
RWRELCPQIVIRSTFIAGFPGETEEEFEHLLNFVREAEIDRAGCFAYSPVDGAAANDIPG
MLSQEVREARQARFMEVAEEVSIAKLKRRIGSTIQVLVDSAPAGGRKGGVGRSYADAPEI
DGVVKLLPPEKLSKVLKVGEFTRAKVVATDGHDLVALPI
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagtaaccacacctaaagttggcttcgtgagcttgggctgtcccaaggctttg
accgactccgaattgatcctgacgcaactcagcgccgagggttatcaaacctctaaaact
tttgctggcgccgacttggtcatcgtcaacacctgcggcttcattgatgacgctgtgaaa
gaaagcttagacacgattggcgaagccttggctgaaaacggcaaggtcatcgtgacaggc
tgcttaggcgcgcgacaaggcgaaggtggctctaacttggtgatgcaaatgcaccccagc
gtgttggcggtcacaggcccacacgccacgcaagaggtgatggacgcggtgcacgcacat
ttgcccaaaccgcatgacccattcatcgacttggtgcccaacagctttggtgaagcaggc
gtcaagctcacacccaagcactatgcgtatttgaaaatcagcgaaggctgtaaccaccgt
tgcacgttttgcatcatcccgtccatgcgtggcgatttggtgagccgcccgattggcgat
gtgctcaaagaagcgcgcgctttgtttgaaggcggcgtgaaagagttgttggtcatcagc
caagacacatcggcctatggtgtggatgtgaagtacgtcaccggtttctttgatggccaa
cccatcaagacgcgtaccttagagctggcgcaagccttggccaagttggctcaaacctat
ggcgcttgggtgcgactgcactatgtgtacccatacccgagtgtggatgacatcattcct
ttgatggccacaggccatgtattgccgtatttggatgtgcctttccagcacagccacccc
gatgtgttgaagcgcatgaagcgcccagccagtggcgagaaaaaccttgagcgcattgca
cgctggcgcgagctttgcccacaaatcgtgattcgcagcactttcattgctggctttcct
ggcgagaccgaagaagagtttgagcatttgctcaacttcgtgcgtgaagctgagatcgac
cgtgcgggttgctttgcctacagccctgtggacggcgctgcggccaatgacattccaggc
atgctgtcgcaagaggtgcgtgaagctcgccaagcgcgtttcatggaagtggcagaagaa
gtgtcgattgccaagctcaagcgccgcattggctcgaccattcaggtgttggtcgattca
gcacctgctggtggccgcaaaggtggtgtgggccgtagctacgccgatgcacctgagatt
gatggcgtggtgaagttgttgccacctgagaagctcagcaaagtattgaaagtgggcgaa
ttcacccgcgccaaagtggtggcgacagatggtcatgaccttgtcgcattaccgatttaa
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