Listeria innocua (serotype 6a): lin1634
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Entry
lin1634 CDS
T00067
Name
(GenBank) similar to thiamin biosynthesis protein ThiI
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
lin
Listeria innocua (serotype 6a)
Pathway
lin00730
Thiamine metabolism
lin01100
Metabolic pathways
lin01240
Biosynthesis of cofactors
lin04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lin00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
lin1634
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
lin1634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lin03016
]
lin1634
Enzymes [BR:
lin01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
lin1634
Transfer RNA biogenesis [BR:
lin03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
lin1634
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
NAD_synthase
tRNA_Me_trans
ATP_bind_3
TEP1_CUB2
Motif
Other DBs
NCBI-ProteinID:
CAC96865
Pasteur:
LIN01634
UniProt:
Q92BB6
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All DBs
Position
complement(1643585..1644796)
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AA seq
403 aa
AA seq
DB search
MEFDRMLIRYGELSTKGKNRKQFVTRLAQNVKRAMKDLPEVRIHGERDRMYIILNGADYQ
LAEERLKPIFGIQSFSPAVRVNLDLDEVKAAALSLVQDAHEENGTFKVAARRSHREFPLD
SNEINQEIGAHVLQNIEDLTVNVKNPDVKLTIDVRKEGVFLSCRTILGAAGLPVGSSGRA
MLMLSGGIDSPVAGYLAQKRGVEIEAVHFHSPPYTSEQAKQKAIDLAGKLAKYSGQVQMH
IVPFTEIQEVIKQQIPESVIMTVTRRMMLRITDELRRKRNGLAIVNGESLGQVASQTLES
MLAINAVTATPIIRPVVAMDKNEIIQIAQKIDTYNLSVQPFEDCCTIFTPPSPKTKPKLD
KIEHYESFTDFDALILKALENVETIAVNVAENAEIKDEFADLF
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
ttggaatttgatcgtatgttaattagatacggagaactatctactaaaggaaaaaacaga
aagcagtttgtgactagactggcacaaaatgtgaaacgcgcaatgaaagatttaccggaa
gtccgtattcacggggaacgcgaccggatgtatattattttaaatggggcggattatcaa
cttgcagaggaacgtttaaaaccgatttttgggattcaatcatttagtccagcagttcgt
gttaatttagatttagatgaggtcaaagcggctgctctctctttagttcaagatgcgcac
gaggaaaatggcacgtttaaagtagcggcaagacgtagccaccgtgagtttccgcttgat
tctaatgaaatcaatcaggaaatcggcgcacatgtgttacaaaatatcgaggacctgact
gtcaatgtaaaaaatccagatgtaaaactaacgattgatgttcgtaaagaaggcgtcttt
ttatcatgtcggacgattcttggggcagctggtcttccggttggttcttctggtcgcgcg
atgctgatgctttctggtggtatcgacagtccagttgctgggtatttagcacaaaaacgt
ggtgtggagattgaagcggttcattttcacagcccgccatatacgagcgaacaagctaaa
caaaaagcaatcgatttagcagggaaattggctaagtatagcggacaagttcaaatgcat
atcgttccatttacagaaattcaagaagtaatcaaacagcaaattcctgagagcgtgatt
atgactgttacacgccgaatgatgcttcgaattacggatgaacttcgccgtaagagaaat
ggattagcgattgttaatggtgaaagtttgggccaagttgccagccaaacactcgaaagt
atgctagcaattaacgctgtaacagctacaccgattattcgcccagttgttgcaatggat
aaaaatgaaattattcaaatcgcacaaaaaatcgatacgtataatttatctgtccaacca
tttgaagattgctgtacgattttcacgccgccttctccaaaaacaaagccaaaacttgat
aaaatcgagcattacgaaagtttcacagattttgatgccttaattttaaaggcattagag
aatgtagaaacgattgctgttaatgttgccgagaatgcagaaataaaagatgagtttgct
gacttattttaa
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