Listeria ivanovii subsp. londoniensis WSLC 30151: JL53_08665
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Entry
JL53_08665 CDS
T03402
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lio
Listeria ivanovii subsp. londoniensis WSLC 30151
Pathway
lio03030
DNA replication
lio03410
Base excision repair
lio03420
Nucleotide excision repair
lio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JL53_08665
03410 Base excision repair
JL53_08665
03420 Nucleotide excision repair
JL53_08665
03440 Homologous recombination
JL53_08665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lio03032
]
JL53_08665
03400 DNA repair and recombination proteins [BR:
lio03400
]
JL53_08665
Enzymes [BR:
lio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JL53_08665
DNA replication proteins [BR:
lio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JL53_08665
DNA repair and recombination proteins [BR:
lio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JL53_08665
NER (nucleotide excision repair)
GGR (global genome repair) factors
JL53_08665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
LTD
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AIS62796
LinkDB
All DBs
Position
complement(1769575..1772202)
Genome browser
AA seq
875 aa
AA seq
DB search
MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAG
KTTFRHATFKGYKGGRQKTPSELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKA
EADGLEVAIITGDRDLTQLASDKTTVYITKKGIADMETNTPETLKEKYNLTPAQIIDMKG
LMGDSSDNIPGIPGVGEKTALKLLHEFGGSVESVLEHADEISGKKLKEKVLENKELAILS
KELATINVESPIECTIESTKYDGYQTEKVIPLLKEMQFTTLLKNIEGDTPEEAKELKELT
FEVVTELTEKHFGGKTALYVELENDNYHTANFIGLTIHSDKGTYFFTKETAENSPAFKEW
IESDASKVVYDAKKTMVAMHRLGYAVSGITFDIMLASYLLNPSDSIDDFTSVAVRHDYTE
VETDEAVYGKGAKRSTPEESIVAVHLARKAVAIAILEKRLLDDLEKNEQLALMEDLELPL
TFVLAQMEMQGVSVDTKRLEDMKVELAGRLKTLEESIHSLAGEEFNINSPKQLGVILFEK
LGLPAVKKTKTGYSTAADVLESLSGKHAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHK
VHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFVPSQPGWKIFSADYSQVELRV
LAHISEDENLIYAFKHDYDIHTKTAMDVFHVEKEEVDSLMRRQAKAVNFGIVYGISDYGL
SQNLGITRKDAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNF
NVRGFAERTAMNTPIQGSAADIIKKAMILMSDRLKSEKLEAKLLLQVHDELIFEAPEAEI
AKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaattagtattgattgatggaaatagtattgcgaatcgcgctttttatgcgtta
ccgcttttaaataatgacaaaggtgtttacacaaatgcggtgtacggatttgccatgatg
ctaatgaacgtgttagaaaaagaaaaaccaagccatgtgttagttgcgtttgatgctgga
aaaacaacttttcgtcatgcaaccttcaaaggctacaaaggcggacgtcaaaaaacaccg
agtgaactttcggaacaatttccgtttattcgtgaacttttaactgcctatgatattccg
caatacgaattagcgaactatgaagccgatgatattatcggaactttaacgaaaaaagca
gaagcggacggtttagaagtagcaataattaccggagatcgtgatttaacgcaacttgct
tccgataaaacaactgtctacattacgaaaaaaggtattgccgatatggaaactaataca
ccagaaacgttaaaagaaaaatataatttaaccccagcacaaatcattgatatgaaaggg
ctgatgggtgattcatcagataatattcctggtattcccggtgtcggcgaaaaaactgct
ttaaaacttttacatgaatttggtggaagcgtggaaagtgtgttggaacatgcggacgag
atatctgggaaaaaattaaaagaaaaagtcctagaaaacaaagaactagctatcttaagt
aaagaattagcaaccatcaacgtggagtcaccaatcgaatgtacgattgaaagtactaaa
tatgacggataccaaacagaaaaagtaattccgctactgaaagagatgcaatttaccact
ttattaaaaaatatcgagggcgatactccggaagaagcaaaagagctaaaagagctgacg
tttgaagttgtaacggaactaacagaaaaacattttggtggcaaaacagcgctttatgtg
gaactagaaaacgacaactaccatacagcgaactttattgggcttaccattcattcagat
aaaggaacttattttttcaccaaagaaactgccgaaaatagtcccgcttttaaagaatgg
atagaaagtgatgcgtcgaaagtagtctatgatgcgaaaaaaacaatggtagctatgcat
cgcttaggatacgcggtttctggcattacttttgatattatgcttgcttcctacttattg
aatccatctgactcgattgatgattttacaagtgtagccgttcgtcatgactatacagag
gtggaaacagacgaagcagtatatggaaaaggagcgaaacgtagtactcctgaagaaagt
attgtcgcagtccaccttgcgagaaaagctgtcgcaatagcaatcttagaaaaaagactt
ttagatgatctcgaaaaaaatgaacagttagctttaatggaagacctagaactaccttta
actttcgtgcttgctcaaatggaaatgcaaggtgtaagtgtagatacgaagcgcttagaa
gatatgaaagtagaactagcgggacgtctaaaaacactggaagaatccattcattcgctt
gccggggaagaattcaatattaattcacctaaacaattaggtgtcattttatttgaaaag
ctaggacttcctgctgtaaagaaaacaaaaactggttattcaacagccgctgatgttcta
gagagtttatctgggaagcatgctattattgatgaaatattgttataccgtcaacttggg
aaaatccaatccacctatattgaagggcttctaaaagtaacggataaagagacacacaaa
gtgcatacacgttttaatcaaacattgacacaaacgggtcgtcttagctccgttgatcct
aatctacaaaatattcctatccgcttagaagaaggacgaaaaattagacaagtttttgtt
ccaagccagccaggatggaagatattttcggccgattattcgcaagtagagttacgcgtg
ttggcacatatttcagaagacgagaatttgatttatgcttttaaacacgattacgatatt
catacaaagactgcaatggacgtatttcatgtggaaaaagaagaagtcgactctttaatg
agacgccaagcaaaagcagttaattttggtattgtatatggtatcagtgattatggactt
tcccaaaaccttggtattactagaaaagatgcaaaagactttattgatcggtattttgtc
agttatccagctgtaaaagaatacatgcaagatatagttcgttttgcgaaagaaaaagga
tatgtggaaactattttacatcgccgtcgttatattcctgaaatcgtcagccgcaatttt
aatgttcgtgggtttgctgagagaacggcaatgaacacgccaatacaaggaagtgcagcg
gatattattaaaaaagcgatgatattaatgagtgatcgtctaaaatccgaaaaattagaa
gccaaattattacttcaagtgcacgatgaacttatttttgaagcgccagaagcagagatt
gccaagctggaagaaatcgtaccagatgtgatggaaaatgctgtagagctatctgtacca
cttaaagtcgatagtgctttcggagacacttggtacgatgcgaaataa
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