Lawsonia intracellularis PHE/MN1-00: LI0024
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Entry
LI0024 CDS
T00354
Symbol
gcpE
Name
(GenBank) Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis
KO
K03526
(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:
1.17.7.1
1.17.7.3
]
Organism
lip
Lawsonia intracellularis PHE/MN1-00
Pathway
lip00900
Terpenoid backbone biosynthesis
lip01100
Metabolic pathways
lip01110
Biosynthesis of secondary metabolites
Module
lip_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
lip00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LI0024 (gcpE)
Enzymes [BR:
lip01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.1 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)
LI0024 (gcpE)
1.17.7.3 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)
LI0024 (gcpE)
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Motif
Pfam:
GcpE
zf-RING_7
Motif
Other DBs
NCBI-ProteinID:
CAJ54080
UniProt:
Q1MSE5
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All DBs
Position
complement(25145..26224)
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AA seq
359 aa
AA seq
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MNIRKKTRKIYIGNIAIGGDAPIIVQSMTNTDTRDIEATLKQINQLHAVGCEIVRLAVPD
ANAAKALKAIHDASPLPLIADIHFDYRLALTALESGIEGLRINPGNIGERKKVVTVVDAA
KAHKASIRIGVNSGSVEKHLIDKFGGPVPEAMVESALNHIKILEDEKFYEIKVSIKSSSV
LDTIAAYRMLSKSCDYPLHLGVTEAGSLIRGTVKSSVGLGILLSEGIGDTLRISLTEDPV
EEVPVAWEILRALGLRRRGPEIIACPSCGRAEIDLIRLTKDVEACLVNEKTPLKIAVMGC
VVNGPGEAKEADIGIAGGRDKGIIFAKGKVIRSVHGQDKLLNVFMEEVNKVIAEYNTTQ
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaatataagaaaaaaaacacgtaagatctatattggaaatattgctattgggggtgat
gctccaattatagttcaaagtatgacaaatactgatacaagggacatagaagctactctt
aagcaaataaaccaactacatgctgtaggatgtgaaattgtacgccttgctgtcccagat
gcaaatgcagcaaaagcattaaaagctattcatgacgcatctccattgccacttattgca
gatattcattttgattatcgcctagccttaacagcacttgaatctggtattgaaggactt
cgtatcaatcctggaaatattggtgaacgaaaaaaagttgtaactgttgttgatgctgca
aaagcccataaagcaagtatacgaattggagtaaatagtggatctgtagaaaaacatctt
attgataagtttggaggaccagtccctgaagctatggttgaaagtgctcttaatcacata
aaaatattagaagatgaaaaattttatgaaataaaagtttccatcaaatcttcttctgtc
ttagacactattgctgcttatagaatgctttctaaatcttgtgattatccacttcacctt
ggtgttactgaggcaggaagtcttattcgtggtactgttaaatcttctgttggactagga
atacttctttcagaaggaattggtgatactcttcgtatttcattaacagaagatcctgta
gaagaagtccctgttgcttgggagatacttcgagctcttgggttacgaagaagaggtcca
gaaattattgcatgcccatcttgtggtagagcagaaattgatcttataagacttaccaaa
gatgttgaagcatgccttgttaatgaaaaaactccactcaaaatagctgttatgggatgt
gttgttaatggacctggagaggcaaaagaagcagatattggcattgctggaggacgtgat
aaaggaattatttttgctaaaggaaaagttatccgtagcgtacatggacaagataaatta
cttaatgtgttcatggaagaagtaaataaagtaatagctgaatacaatacaacacaataa
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