Lactobacillus intestinalis: KBW87_09215
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Entry
KBW87_09215 CDS
T08339
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
liq
Lactobacillus intestinalis
Pathway
liq00190
Oxidative phosphorylation
liq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
liq00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
KBW87_09215
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KBW87_09215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
liq03019
]
KBW87_09215
Enzymes [BR:
liq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
KBW87_09215
Messenger RNA biogenesis [BR:
liq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KBW87_09215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Cor1
RE_NgoFVII
Motif
Other DBs
NCBI-ProteinID:
UTW41278
LinkDB
All DBs
Position
unnamed2:231331..233526
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AA seq
731 aa
AA seq
DB search
MSDKLLKLEKQETKKYRKPEYYINRELSWMDFNDRVLEEARNKDNPLLDRVNFLGITQSN
VDEFFMVRVASLHKLVAAGITSTDASGMTPQKQLDEINKKEHKEVEKRYSTYSRSLLPLL
ESNNIYIKNVEDLNEHQYEFIRRYFYDELYPVLTPMADDTNRPFPFIANDSLNIAVRLKD
TENGNHDYATVRVPNIFKRLVKLPDAENSFVLLENIIKEFIWQLFDGYEVKEAATFRATR
DMDLDVAERDTSDFLRSVQTQLKDREHGKVVRLEIDKNMGDKLRRRLFKKLKVSENEVYE
INGPIDLTFLKKMLGAVQGHDDLRYKPFKGYVDPDLELSSDIFANIRKRDYLVQHPYDSF
DTVLNFIKKAAHDDKVLAIKMTLYRVSGNSPIIKYLGQAAQAGKQVTVLVEVKARFDEQN
NVHWARTLEQMGCHVIYGLKGLKTHTKITCVIRRDEDGIRRYLHLGTGNYNDVTAHFYTD
MGLFTCRRDLGVDATNLFNMLSGYSKPPYFRQLRISPEHIREFINEKVDNEIAIAKAGRH
AEIHMKMNSLSDPEIIAKLYQASHAGVKIHLIVRGICCLRTDIPGISDNIEVHSIVGRLL
EHSRIYYFYNDGNDEIYLSSADMMKRNLNRRVETLFPVLQPDLKQRAIDIYNKMWEDNVK
GRILHNDTYTMIDRRGKEAVNCQEFFIEQAQEKNEELKQRRKANARKIETFEVIRRQDND
LKLDEKKDNNG
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataagcttttaaagcttgaaaagcaagaaacaaaaaagtatagaaagcctgaa
tattacattaaccgtgaacttagttggatggacttcaatgatcgtgtattagaagaagcc
cgtaataaggataatccgcttttagatagagttaactttttgggaattactcaaagtaat
gtcgatgagttcttcatggttagagttgcttcattacataaattagttgctgcaggaatc
acttcaaccgatgcttctggaatgacaccacaaaagcaattggatgagatcaataagaaa
gaacacaaggaagttgagaagagatattcaacttactcacgctcacttttgccattatta
gaaagtaataatatttacatcaaaaatgtagaagatttaaatgaacatcaatacgaattc
attagacgttacttttatgatgaactctatcctgtacttaccccaatggctgacgatact
aaccgtccatttccattcattgcaaatgattccttaaatattgccgttcgcttgaaagat
actgaaaatggcaatcatgattatgccacagtgcgagtacctaacatttttaaacgttta
gttaaattgcctgatgccgaaaatagcttcgttttgctagaaaacattatcaaagaattt
atttggcaactttttgatggctacgaagttaaagaagctgctacttttagagctactaga
gatatggacttagatgtagcagaacgagatacttcagactttttgagaagtgttcagact
caattgaaagatcgtgaacatggtaaggtggtccgtcttgaaattgataaaaacatgggg
gataaacttcggcggcgtctctttaaaaaattgaaagtcagtgagaatgaggtctatgaa
attaatggaccgatcgatttgactttcttaaagaaaatgttaggagccgttcaaggacat
gatgatttacgctacaagccatttaaaggatatgtagatcctgatttggaattatccagt
gatatctttgccaatattaggaaacgtgattatttagttcaacacccttatgattctttc
gatacagttcttaactttatcaaaaaagctgctcatgatgataaggttttagctattaaa
atgacgctttatcgtgtatcagggaattctccaattattaagtatttaggccaagcagcc
caagctggaaaacaagtaactgttttggtagaagtaaaggcccgttttgatgaacaaaat
aatgtccactgggctagaactttagagcaaatgggatgtcacgtaatttatggtttaaag
ggattaaagacccatactaagattacttgtgtaattagacgagacgaagatggaattcgt
cgttatttgcacctaggtacgggaaattataatgatgtgactgctcatttctataccgat
atggggctctttacttgtcgccgtgatctaggagtagacgctactaatttgtttaatatg
ttgtcaggttattcaaaaccaccatatttcagacaattaagaatttctccagagcatatt
cgtgaatttatcaacgaaaaggtagataatgaaattgcaattgccaaggctggacgtcat
gctgaaattcatatgaagatgaattctttatccgatccagaaattattgctaagctttat
caagcttctcatgctggtgtaaaaattcacttaatagtccgtggtatttgttgtttgaga
accgatattccgggaatcagcgataatatcgaagttcactcaattgtgggacgtttactt
gaacatagtcgaatctattatttctataatgatggaaatgatgagatttatctttcaagt
gcagatatgatgaaacgaaacttgaacagaagagttgaaacactatttccagttttacaa
ccggacttaaaacagcgtgccattgatatttacaacaagatgtgggaggacaatgtaaag
ggcagaattttgcataatgatacttacacaatgattgatagacgaggaaaagaagccgtc
aactgtcaggaattttttattgagcaagctcaagaaaagaatgaagaattaaagcaaaga
cgcaaggctaacgcaagaaaaattgaaacttttgaagttatcagaagacaggataatgat
ttgaaactcgatgaaaagaaggataataatggataa
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