Lysinibacillus irui: OU989_02455
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Entry
OU989_02455 CDS
T09550
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
liu
Lysinibacillus irui
Pathway
liu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
liu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OU989_02455 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
liu03021
]
OU989_02455 (rpoE)
03400 DNA repair and recombination proteins [BR:
liu03400
]
OU989_02455 (rpoE)
Transcription machinery [BR:
liu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OU989_02455 (rpoE)
DNA repair and recombination proteins [BR:
liu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OU989_02455 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
TPR_20
CDK5RAP3
Motif
Other DBs
NCBI-ProteinID:
WDV07361
LinkDB
All DBs
Position
504019..504558
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AA seq
179 aa
AA seq
DB search
MNFREMTKEQLTEESLINLAYAVLNEKRASVSFNDLLKIIQELVGYSDEEMKSRLLQFYT
DINIDGRFLYNQETGWGLREWFKVEQIEEETAPSVKTQKKKSKAAFDEDEDLDDVDLDEE
DIDFDEDFEEFVDEEELDEEEEDKEDIDFDDDELEDIDEEIDEDFIDEEEEFEEEEEEI
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
ttgaattttcgtgaaatgacaaaggaacaattaacagaagaatcgttaattaacttagct
tatgcagttttaaatgaaaaacgtgcctcagtgtcttttaatgatttgctaaaaataatt
caagaacttgtaggctatagtgatgaagaaatgaaatcccgtctactacaattttacaca
gatatcaatatagatggccgtttcttatataatcaagaaacaggttggggcttacgtgaa
tggtttaaagttgagcaaattgaagaagaaacagcaccttcagttaagactcaaaagaaa
aaatctaaagctgcgtttgatgaggatgaggaccttgatgatgtagatctagatgaagag
gatattgattttgacgaagacttcgaagagttcgttgatgaagaagaacttgatgaagaa
gaagaggataaagaagatatcgattttgatgatgatgaattagaagacattgatgaagag
atcgatgaagactttattgatgaagaagaagagtttgaggaagaagaggaagagatctaa
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