Lichenihabitans sp. PAMC28606: LGH83_05625
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Entry
LGH83_05625 CDS
T07621
Name
(GenBank) pseudouridine-5'-phosphate glycosidase
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz00240
Pyrimidine metabolism
liz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
LGH83_05625
Enzymes [BR:
liz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
LGH83_05625
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
UDL95692
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All DBs
Position
complement(1162145..1163110)
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AA seq
321 aa
AA seq
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MSVALDNFAGLVEVGAEVREALAAGRAVVALESTIITHGMPYPENLETAQAVEAVVRQGG
AVPATIAIMDGVFRVGIEAVDLDRLANRSSGVVKASRRDIASVLARGGTAGTTVATTMIG
AHLAGIRIFATGGVGGVHRGAEQTFDISADLSELAKTPVAVVCAGAKSILDIPKTLEVLE
THGVPVIGYQTNDFPAFYARVSGYPVDHRVESATDIARIIAIGERLGMRNGLLVANPIPE
TDALDATLIEERIARAIRDADAAGVSRKDLTPFLLQRMYELTEGRSLTANIALVRNNAAL
GAGIAVALADLEATTSHRATA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcgctttggacaatttcgccgggctcgtcgaggtcggggcggaggtccgcgag
gccctggcggccggtcgcgccgtggtggcgctcgaatccaccatcatcacgcatgggatg
ccgtatccagagaacctcgaaaccgctcaggcggtcgaagcggtcgtgcgtcagggcggg
gctgttccagccacgatcgcgatcatggatggcgtgttccgggtcggcatcgaggccgtc
gatctcgatcggctcgccaaccgatcctcgggcgtcgtcaaggcgtcgcggcgggacatt
gcctcggttctggcccgtggcggcacggccggaacgacggtggccaccaccatgatcggc
gcgcatctcgccgggatcaggatcttcgcaacgggcggtgtcgggggcgttcaccgcggc
gccgaacaaaccttcgatatctcagccgacttgtccgaactcgccaagaccccggtcgcg
gtggtctgcgccggagccaagtcgatcctcgacattccgaagacgctggaagttctagaa
acccatggcgtgccggtgatcggctaccagacgaatgattttccggcgttttacgcgcgg
gtcagcgggtacccggtcgatcatcgcgtcgagagcgcgaccgatatcgcgcgcatcatc
gcaatcggtgagcgcctcgggatgcggaacggtctcctggtcgccaatccaatccccgag
acggatgcgctcgacgcgaccctcatcgaggaacggatcgctcgagcgatccgtgacgcc
gatgcggcgggcgtgtcgcggaaagatctcacgcctttcctgctgcagcgcatgtatgaa
ttgaccgaggggcgcagcctgaccgccaatatcgcgcttgttcgcaacaatgccgcgctt
ggagccggtatcgcggtggcgctggccgacctcgaggcgacaacatcgcaccgcgcgacg
gcctga
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