Lichenihabitans sp. PAMC28606: LGH83_10630
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Entry
LGH83_10630 CDS
T07621
Name
(GenBank) polyprenyl synthetase family protein
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz00900
Terpenoid backbone biosynthesis
liz01100
Metabolic pathways
liz01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LGH83_10630
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
liz01006
]
LGH83_10630
Enzymes [BR:
liz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
LGH83_10630
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
LGH83_10630
2.5.1.29 geranylgeranyl diphosphate synthase
LGH83_10630
Prenyltransferases [BR:
liz01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LGH83_10630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
UDL93083
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All DBs
Position
complement(2258923..2259804)
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AA seq
293 aa
AA seq
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MSRQLEDCLLRVDQTMDDLVGPVAHDDDLPPFHGDDAASYHLRSGGQRMRARLGVHASLS
LGVADADAVAIGAAVELLHNASLIHDDLQDRDRTRRGHDAVWSRYGSNVAICTGDLLISA
AFASIASLTIGTSVPAAVRLMHRSVASAIRGQGADLSFETRSLSDAATYDAIAFAKSGVL
LSLPLELAFIVAGRHDLCGLARQAAGAFAIGYQIADDIADADRDRSLNLVSVLTAAGVSD
PLGAARRRAQDRLATGRHLALALPDGSGALLVALCDRLSTSLIGESAMVCGRS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtcaactcgaggattgcttgctccgcgtcgatcagacgatggacgatcttgtc
gggcctgtcgcgcatgatgacgatctcccgccgttccatggcgatgatgcggcctcctat
catctgagatccggtggtcagcgcatgagggctcgcctcggcgtccacgccagtctgtca
cttggtgtcgccgacgccgacgcggttgcgatcggggctgccgtcgagcttctgcacaat
gcgtcgcttatccacgacgatctccaggatcgagatcgaacgcgacgcggtcacgacgcg
gtctggtctcgatacggcagcaacgtcgcgatctgcacgggcgatctgctcatttcggct
gcctttgcgtcgatcgcgtcgctcacgatcggcacttccgtcccagcggccgtcaggctg
atgcacaggagcgtggcctcggccatccgggggcaaggcgccgacctgtcttttgaaacg
cgaagcctgagtgacgcggcgacgtatgatgccatcgcgttcgcaaaatccggcgtcttg
ctgagcctgccgctggaactcgctttcatcgtggctggacgtcacgacctgtgcggtctt
gcgcgacaggcggctggcgctttcgcgattgggtatcagattgccgacgacatcgcggat
gccgatcgggatcgctccctcaacctcgtgtcggtcttgactgcggccggtgtctccgac
ccccttggggccgcgcgacgtcgcgctcaggatcgtttggccaccggccgccatctcgcg
ctcgccctcccggacggatccggcgcccttctggtcgcgctctgcgatcgtttgtcgaca
tccctgatcggagaaagcgccatggtatgcgggcgctcgtaa
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