Lichenihabitans sp. PAMC28606: LGH83_18535
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Entry
LGH83_18535 CDS
T07621
Name
(GenBank) lysine--tRNA ligase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
liz
Lichenihabitans sp. PAMC28606
Pathway
liz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LGH83_18535
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
liz01007
]
LGH83_18535
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
liz03016
]
LGH83_18535
Enzymes [BR:
liz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
LGH83_18535
Amino acid related enzymes [BR:
liz01007
]
Aminoacyl-tRNA synthetase
Class I (A)
LGH83_18535
Transfer RNA biogenesis [BR:
liz03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
LGH83_18535
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1b
tRNA-synt_1
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
UDL94470
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Position
complement(3936006..3937724)
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AA seq
572 aa
AA seq
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MPPDPIAALDDDFSAFVQTATAWPFEEARKLIARVKRTGQTEVLFETGYGPSGLPHIGTF
GEVARTTMVRHAFRILTEDTIPTRLVAFSDDMDGLRKVPDNIPNRDAMLPFLGKPLTQVP
DPFGTHESFGAHNNARLRSFLDQFGFDYSFVSSTQAYAAGEFDAALLLMLERYDAIMAIM
LPSFREERAASYSPFLPIHPETGVVMQVALESHDAAAGTISWRDPVTNTLFVTPVTGGHC
KLQWKPDWAMRWHALGVDYEMAGKDLIDSVKLSGRICRALGSEPPDGFNYELFLDEQGQK
ISKSKGNGLTIDDWLTYASPESLSLFMYAKPTAAKRLFFDVIPRAVDDYLTFLDAYPRQG
WRERLGNPVWHIHSGNPPAPERLTADGGTSVSFVMLLNLVAVANTEDATVLWGFLRNYAP
DASPETHPRLDRLVHYAVRYYRDFVRPAKQYRAADEVERSALQALSDMLGALPPGSGAEE
IQTALYDIARPISRYQDFKAKTATPERPGVSNDWFNMLYQVLLGEAKGPRFGSFAALYGL
PETRALIGKALDGTLIEDHAAFLAERQASSVP
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgccccccgacccgatcgctgccctcgacgacgacttttctgccttcgtgcagactgcc
actgcctggccgttcgaggaagcgcgcaaattgatcgcgcgggtcaagcgcaccgggcag
acggaggttctgttcgaaaccggctatggcccgtcaggcctgccgcatatcggcaccttc
ggcgaagtggcgcggaccaccatggtgcggcatgcgttccgcatcttgaccgaagacacc
attccgacgcggctcgtcgccttttcggacgatatggacggcctgcgaaaggtgccggac
aacatccccaaccgcgacgcgatgctgccctttctcggcaagccgctgacgcaggtcccc
gatccattcggtacacacgagagcttcggcgcgcataacaatgcacgcctgcggagcttc
ctcgaccagttcggcttcgactattccttcgtgtcgtcgacgcaggcttatgcggctggg
gagttcgacgccgcgcttcttctgatgctggagcgctacgacgccatcatggcgatcatg
ctcccgagctttcgcgaagagcgggccgcgagctattcgccgttcctgccgatccatccg
gaaaccggcgttgtcatgcaggttgcgctcgaaagccacgatgcggccgccggaaccatc
tcctggcgcgatcccgtcaccaatacgctctttgtcacgcctgtcacgggcggtcattgc
aagctgcagtggaagcccgattgggcgatgcggtggcatgcacttggcgtcgactatgaa
atggccggcaaggatctcatcgactcggtgaagctctcaggccgcatctgtcgcgcgctt
ggctcggagccgccggacggattcaactacgaattgttcctcgacgaacaaggccagaag
atctcgaagtcgaaaggcaacggtctcacgatcgacgattggctgacctatgcgtcgccc
gaaagcctatcgctgttcatgtatgcgaagccgaccgccgccaagcgtttgttcttcgac
gtgatcccgcgcgccgtcgacgattacctgaccttcctcgacgcctatccccgccagggc
tggcgcgagcggcttggcaatcccgtctggcacattcattccggaaatccgcccgcccct
gagcgtctgacggccgatggcggcacctcggtgtcattcgtcatgctgctcaacctcgtg
gcggtcgccaataccgaggatgcgacggtgctgtggggcttcctccgcaattatgcgccg
gacgcctcgcccgagacccatccgcgcctcgatcggctggtgcattatgcggtgcgctac
tatcgggacttcgtgcggccggccaagcaatatcgcgcggccgacgaggtcgagcggagc
gccctccaggcgttgtccgacatgctgggcgccctgccgccgggcagcggcgccgaggag
atccagaccgcgctctacgacattgcccgcccgatctcgcgttatcaggacttcaaagcc
aagactgcgacgccggagcggcccggcgtatcgaacgactggttcaacatgctgtatcag
gtgctgctgggcgaggcgaaagggccgcgcttcggctcgtttgcggcactttacggcctg
cccgagacccgcgccctcatcggcaaggcgcttgacggcacgttgatcgaggaccatgcg
gccttcctggccgagcgccaggcgtcgagcgttccatga
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