Lichenihabitans sp. PAMC28606: LGH83_19625
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Entry
LGH83_19625 CDS
T07621
Name
(GenBank) TCR/Tet family MFS transporter
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
liz
Lichenihabitans sp. PAMC28606
Brite
KEGG Orthology (KO) [BR:
liz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
liz02000
]
LGH83_19625
01504 Antimicrobial resistance genes [BR:
liz01504
]
LGH83_19625
Transporters [BR:
liz02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
LGH83_19625
Antimicrobial resistance genes [BR:
liz01504
]
Gene variants
Tetracycline resistance genes
Transporters
LGH83_19625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
MFS_5
MFS_4
LacY_symp
DUF2238
Motif
Other DBs
NCBI-ProteinID:
UDL94667
LinkDB
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Position
4174256..4175497
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AA seq
413 aa
AA seq
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MSHSSETPAPSHRLALSVVLASVLLDMVGIGIVVPVLPEMIRAISGSDISQASVVGGWLF
VAYSAMQFLCGPAIGNLSDAFGRRPVLLASILGLGLDYIVTAFAPSVGWLFVGRIIAGIC
GASYTTANAYIADITPPEGRAKAFGLIGAAFGIGFILGPAIGGLLGQFGHKVPFLAAAAC
SLLNFAFGYFVLPESLQPDMRRRFRWSRASPFGAVAALRRQPALTRWAIVLLLFFLAQAV
YVSVWAYSAIARYGWSEAQIGISLALVGITSALVQGLLVAPIIRRIGERNAALIGVVAAC
LSAIGYMLASEGWMVYALIILGAIQGLAMPAINALMSHEVPAEAQGELQGAVASVQSLAS
ILGPLLMTQIFAAFTAPGAPVLFPGAPFAAAAVLFGASTLLLLRTSPRRSASA
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtctcattcatccgaaacgcccgccccctcccatcgcctcgccctctccgtggtcctc
gcctccgtcctgctcgacatggtcggcatcggcattgtggtcccggttctcccggagatg
attcgcgcgatctccgggagtgatatctcgcaagcgtcggtggtgggcggttggctgttc
gtggcctattcggccatgcagtttctctgcgggccagccatcggcaatctgtcggatgcg
ttcgggcgacggccggtgctgctcgcctcgatcctcggcctcgggctcgactatatcgtc
acggcttttgcgccatcggtcgggtggctgttcgtcggtcgtatcattgccgggatctgc
ggcgcgtcctacacgaccgccaatgcctatatcgccgatattaccccacccgagggacgc
gccaaagcattcgggctgatcggcgccgcctttgggatcggctttatccttggcccagct
atcgggggccttctcggccagttcggccacaaggtgccgtttctggcggccgccgcctgc
tctctgctgaatttcgccttcggctattttgttctgccggaatcgctgcagcccgatatg
cgacggcggttccggtggtcgcgcgccagtccgttcggggccgtcgcggccctgcgtcgc
cagccggccctgacccggtgggcgattgtgctgctactcttctttctcgcgcaggccgtc
tatgtgtcggtctgggcctattcggcgatcgcccgctacggctggagcgaggcacagatc
ggcatctctctggccttggtcggcatcacttcggccctggtgcaaggcctgttggtggct
cccatcattcgccgcatcggggagcggaacgcggcgctgatcggcgtcgtggcggcttgc
ctatcggcgatcggttacatgctcgcgagcgagggctggatggtctatgcgctcatcatc
ctcggggccattcagggtctcgcgatgccggccatcaacgcgttgatgtcgcatgaggtg
ccggccgaggcgcagggcgaattgcagggcgctgtcgccagcgtgcaaagccttgcctcg
atcctcggtccgttgctgatgacgcagatcttcgcggcctttacggcgcccggcgcgccg
gttctgttccccggcgcacccttcgcggcggcggcggttctgttcggcgcctcgaccctg
ctgttgttacgaacctccccacgacgcagcgcgtcggcgtga
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