Lotus japonicus: Lj1g3v4317680.1
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Entry
Lj1g3v4317680.1 CDS
T04348
Symbol
Lj1g3v4317680.1
Name
(Kazusa) -
KO
K02328
DNA polymerase delta subunit 2
Organism
lja
Lotus japonicus
Pathway
lja03030
DNA replication
lja03410
Base excision repair
lja03420
Nucleotide excision repair
lja03430
Mismatch repair
lja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Lj1g3v4317680.1 (Lj1g3v4317680.1)
03410 Base excision repair
Lj1g3v4317680.1 (Lj1g3v4317680.1)
03420 Nucleotide excision repair
Lj1g3v4317680.1 (Lj1g3v4317680.1)
03430 Mismatch repair
Lj1g3v4317680.1 (Lj1g3v4317680.1)
03440 Homologous recombination
Lj1g3v4317680.1 (Lj1g3v4317680.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lja03032
]
Lj1g3v4317680.1 (Lj1g3v4317680.1)
03400 DNA repair and recombination proteins [BR:
lja03400
]
Lj1g3v4317680.1 (Lj1g3v4317680.1)
DNA replication proteins [BR:
lja03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
Lj1g3v4317680.1 (Lj1g3v4317680.1)
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
Lj1g3v4317680.1 (Lj1g3v4317680.1)
MMR (mismatch excision repair)
DNA polymerase delta complex
Lj1g3v4317680.1 (Lj1g3v4317680.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
LinkDB
All DBs
AA seq
435 aa
AA seq
DB search
MVMDRVQCSYEPLDEPFEIGKEMYRGQQYSQIYFARLHLMRTLLHSLVPHLKPNLPVCTV
LGLEEQAGKECVIVGTLYKHMKLKPCILDEYSKERSAVPLVKPHNFMHPDDHLILEDESG
RVKLGGDLISPSVYVTGIVVAVHGKETEAGEFLVQDVLEAGLPPQIEFPLKSREDKYVVF
VSGLSIGSSNSNPLQFQLLIDHITGHLGDEKEKSIASQTVRVVIAGNSVEIPSGLFNGQN
MGSKDLSRISEPIKELDILLNQIAAGLPLDIMPGPSDPSNYSLPQQALHRCLFPGSSAYN
TFTSCTNPHSFELDNIRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLG
CYPYTDRDPFFIESCPHVYFIGNQDKYDTRVIKGSEGQLVRLICVPKFSETGVAVMLNLR
DLECHALSFGTQFSS
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggacagagtgcaatgctcctacgagcccttggatgaaccattcgagattggg
aaagagatgtatcgaggacaacaatacagccaaatctacttcgctcgccttcacctgatg
cgaacactcttgcactctcttgtcccgcatttgaaacccaatcttcctgtatgcacagtt
ttgggattggaagaacaagcgggcaaggagtgtgtcattgttggaactctctataagcat
atgaagctcaaaccttgcatacttgatgagtattctaaggagagatcggctgttccactt
gtcaagccacataacttcatgcacccagatgaccacctaattttggaagatgaaagcggg
agagttaagcttggtggggatctcatttcaccttccgtatacgtaacaggaattgtggtt
gctgtacatggaaaggaaacagaggctggtgaatttttggttcaggatgttctagaagct
ggcttaccaccacaaatagaatttccacttaaatcaagggaagacaaatacgttgttttt
gtgtcaggattaagtattgggagcagcaactctaatcctcttcagtttcagcttctcatt
gatcatattactgggcatttaggagatgagaaggaaaaaagtattgcgtcacaaactgtt
cgcgtggtcattgctggaaattctgttgagatacctagtggactttttaatggacagaat
atgggttcaaaggatctgtcaaggatatctgaaccaataaaggagctagatattctgttg
aatcagattgctgctggtttgcctttggacataatgccagggcccagtgacccttcaaat
tactcattaccacagcaggcgctgcatagatgccttttccctgggtcgtcagcatataac
acttttacatcttgtacaaatcctcatagttttgagcttgataatatcaggtttcttggg
acatcaggtcagaatgtagatgatctcgaaaagtattcagaggcaaaagataaacttgaa
ttcatggagaggacattaagatggaggcatttggcacccactgcacctaatacccttggg
tgctatccttatactgatagggatcctttcttcatcgagagctgtcctcatgtgtacttt
attggcaatcaggataaatatgacactcgtgtgataaagggatcagaagggcagttggtg
agactcatatgtgttcctaaattcagtgaaactggagttgctgttatgttaaatctgagg
gatctggaatgtcatgctctcagttttggaacccagttcagctca
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