KEGG   Lotus japonicus: Lj1g3v4317680.1
Entry
Lj1g3v4317680.1   CDS       T04348                                 
Symbol
Lj1g3v4317680.1
Name
(Kazusa) -
  KO
K02328  DNA polymerase delta subunit 2
Organism
lja  Lotus japonicus
Pathway
lja03030  DNA replication
lja03410  Base excision repair
lja03420  Nucleotide excision repair
lja03430  Mismatch repair
lja03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Lj1g3v4317680.1 (Lj1g3v4317680.1)
   03410 Base excision repair
    Lj1g3v4317680.1 (Lj1g3v4317680.1)
   03420 Nucleotide excision repair
    Lj1g3v4317680.1 (Lj1g3v4317680.1)
   03430 Mismatch repair
    Lj1g3v4317680.1 (Lj1g3v4317680.1)
   03440 Homologous recombination
    Lj1g3v4317680.1 (Lj1g3v4317680.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lja03032]
    Lj1g3v4317680.1 (Lj1g3v4317680.1)
   03400 DNA repair and recombination proteins [BR:lja03400]
    Lj1g3v4317680.1 (Lj1g3v4317680.1)
DNA replication proteins [BR:lja03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    Lj1g3v4317680.1 (Lj1g3v4317680.1)
DNA repair and recombination proteins [BR:lja03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      Lj1g3v4317680.1 (Lj1g3v4317680.1)
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     Lj1g3v4317680.1 (Lj1g3v4317680.1)
SSDB
Motif
Pfam: DNA_pol_E_B DNA_pol_D_N
LinkDB
AA seq 435 aa
MVMDRVQCSYEPLDEPFEIGKEMYRGQQYSQIYFARLHLMRTLLHSLVPHLKPNLPVCTV
LGLEEQAGKECVIVGTLYKHMKLKPCILDEYSKERSAVPLVKPHNFMHPDDHLILEDESG
RVKLGGDLISPSVYVTGIVVAVHGKETEAGEFLVQDVLEAGLPPQIEFPLKSREDKYVVF
VSGLSIGSSNSNPLQFQLLIDHITGHLGDEKEKSIASQTVRVVIAGNSVEIPSGLFNGQN
MGSKDLSRISEPIKELDILLNQIAAGLPLDIMPGPSDPSNYSLPQQALHRCLFPGSSAYN
TFTSCTNPHSFELDNIRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAPNTLG
CYPYTDRDPFFIESCPHVYFIGNQDKYDTRVIKGSEGQLVRLICVPKFSETGVAVMLNLR
DLECHALSFGTQFSS
NT seq 1305 nt   +upstreamnt  +downstreamnt
atggtgatggacagagtgcaatgctcctacgagcccttggatgaaccattcgagattggg
aaagagatgtatcgaggacaacaatacagccaaatctacttcgctcgccttcacctgatg
cgaacactcttgcactctcttgtcccgcatttgaaacccaatcttcctgtatgcacagtt
ttgggattggaagaacaagcgggcaaggagtgtgtcattgttggaactctctataagcat
atgaagctcaaaccttgcatacttgatgagtattctaaggagagatcggctgttccactt
gtcaagccacataacttcatgcacccagatgaccacctaattttggaagatgaaagcggg
agagttaagcttggtggggatctcatttcaccttccgtatacgtaacaggaattgtggtt
gctgtacatggaaaggaaacagaggctggtgaatttttggttcaggatgttctagaagct
ggcttaccaccacaaatagaatttccacttaaatcaagggaagacaaatacgttgttttt
gtgtcaggattaagtattgggagcagcaactctaatcctcttcagtttcagcttctcatt
gatcatattactgggcatttaggagatgagaaggaaaaaagtattgcgtcacaaactgtt
cgcgtggtcattgctggaaattctgttgagatacctagtggactttttaatggacagaat
atgggttcaaaggatctgtcaaggatatctgaaccaataaaggagctagatattctgttg
aatcagattgctgctggtttgcctttggacataatgccagggcccagtgacccttcaaat
tactcattaccacagcaggcgctgcatagatgccttttccctgggtcgtcagcatataac
acttttacatcttgtacaaatcctcatagttttgagcttgataatatcaggtttcttggg
acatcaggtcagaatgtagatgatctcgaaaagtattcagaggcaaaagataaacttgaa
ttcatggagaggacattaagatggaggcatttggcacccactgcacctaatacccttggg
tgctatccttatactgatagggatcctttcttcatcgagagctgtcctcatgtgtacttt
attggcaatcaggataaatatgacactcgtgtgataaagggatcagaagggcagttggtg
agactcatatgtgttcctaaattcagtgaaactggagttgctgttatgttaaatctgagg
gatctggaatgtcatgctctcagttttggaacccagttcagctca

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