Lotus japonicus: Lj2g3v0039360.1
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Entry
Lj2g3v0039360.1 CDS
T04348
Symbol
Lj2g3v0039360.1
Name
(Kazusa) -
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
lja
Lotus japonicus
Pathway
lja03020
RNA polymerase
lja03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Lj2g3v0039360.1 (Lj2g3v0039360.1)
09124 Replication and repair
03420 Nucleotide excision repair
Lj2g3v0039360.1 (Lj2g3v0039360.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lja03021
]
Lj2g3v0039360.1 (Lj2g3v0039360.1)
03019 Messenger RNA biogenesis [BR:
lja03019
]
Lj2g3v0039360.1 (Lj2g3v0039360.1)
03400 DNA repair and recombination proteins [BR:
lja03400
]
Lj2g3v0039360.1 (Lj2g3v0039360.1)
Transcription machinery [BR:
lja03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
Lj2g3v0039360.1 (Lj2g3v0039360.1)
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Lj2g3v0039360.1 (Lj2g3v0039360.1)
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
Lj2g3v0039360.1 (Lj2g3v0039360.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
LinkDB
All DBs
AA seq
176 aa
AA seq
DB search
MFFHIVLERNMQLHPRYFGRNLRDNLVAKLMKDVEGTCSGRHGFVVAVTGIENVGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPVAI
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgtttttccacatagtgctggaacggaacatgcagctgcacccacgttactttggccgt
aatcttcgtgataatcttgttgccaagctaatgaaagatgtggaaggaacttgcagtggt
cggcatggatttgtggtggcggttacagggatagaaaatgttggaaaagggttaattcgt
gatggtacagggttcgtgacatttccggttaagtaccaatgtgtcgtcttcagaccattt
aagggagagatcttagaagctgttgttaccatggtgaataagatgggattttttgctgaa
gctggacctgttcaaatcttcgtctcaaaccatttgattccagatgatatggagttccag
tctggtgacatgccaaattacactacttcagatggatcagttaagattcagaaagatagt
gaagtgagactaaagataattgggactcgagtggatgctaccgaaattttctgcatagga
accataaaagatgatttcttgggtgtgatcaacgaccctgtagcaatctaaatg
DBGET
integrated database retrieval system