Lotus japonicus: Lj3g3v1906470.1
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Entry
Lj3g3v1906470.1 CDS
T04348
Symbol
Lj3g3v1906470.1
Name
(Kazusa) -
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
lja
Lotus japonicus
Pathway
lja03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Lj3g3v1906470.1 (Lj3g3v1906470.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lja03021
]
Lj3g3v1906470.1 (Lj3g3v1906470.1)
Enzymes [BR:
lja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Lj3g3v1906470.1 (Lj3g3v1906470.1)
Transcription machinery [BR:
lja03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
Lj3g3v1906470.1 (Lj3g3v1906470.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
DUF5689
Motif
LinkDB
All DBs
AA seq
994 aa
AA seq
DB search
MSTVRNSFSQRREGYTDKAVVIRCVRADQSSLTVKLYYLRNDSARLGFWVKGREYLLPVG
IVLKALIDTSDLEIRTNLKSCYNEKYEKGKGAVGTQRVDDRARMIIEEVRQLSLFTRLQC
LNYIGEHFQPILTELKNDSYDTVAKAVLKDYVFVHLDDNFDKFNLLIFMLQKLFSLVDGT
SVLDNPDSLQNQEVLLPGHLITLYLKEKLEDWLQSGKDEMKRKSGTFDFSEIFVVKKCFD
KTPARAISTSIENMLKTGRLVTNTGLDLQQRAGYTVQADRLNYLRFLSHFRAVHRGASFA
GLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYFDSQGSIKDYFKIKIS
ILDILVDSGMTQLVPKLLLPGPPEVLTVLLDGCIVGCIPSGEVEKIVAHIRELKVSSSAM
IPDDLEVGYVPLSMGGAYPGLYLFTSPSRFVRPVRNISILSNENKNIDLIGPFEQVFMEI
RCPDGGDGGRKSSFPATHEEIHPTGMLSVVANRTPWSDHNQSPRNMYQCQMAKQTMAFSS
QTIQHRADQKLYHLQTPQTPIVRTSTYTKYNIDEYPTGTNAIVAVLAYTGYDMEDAMILN
KSSVERGMFHGQIYQTETVDLTEQGSRSDPSSRMFRKSNIEKSKLDSDGLPHVGQMIRPD
EPYCSIYNASTSSTHTLKKKGSEPVYVDYVAVDVKNKKDLQKVNIRFRHPRNPVIGDKFS
SRHGQKGVCSQLWPDVDMPFCGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGE
FVNATPFRGSVKKDNGESEKSGLLLDDLGQMLREKGFNYHGLEVLYSGVYGKELTCEIFI
GPVYYQRLRHMVSDKFQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSLLAHGAAYLL
HDRLHTCSDYHIADVCSLCGSMLATSFIQPQKLPRREIGGLPPRKAPKKVICHACQTSKG
METVAMPYVFRYLAAEFAAMNIKMTLKLNNGASA
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagtacggaattcatttagtcagcggcgggagggatatactgataaagcagtt
gtaataaggtgtgtaagagctgatcaatcctcactaaccgtaaaattgtattaccttcgt
aatgacagtgcaagacttggtttctgggtaaaagggagggagtacttgcttcccgtaggc
attgttttgaaggccctcattgacaccagtgaccttgaaattcgtacaaatttgaaaagc
tgctacaatgagaagtatgaaaagggaaagggtgctgttggaacccagcgtgttgacgat
agggcaagaatgataatagaggaagttcgacagttgtctcttttcactcgccttcaatgt
ctaaattatatcggagagcatttccaacctattctgactgaacttaaaaatgacagctat
gataccgtggccaaggcagttctaaaggactacgtgtttgttcatctggatgataatttt
gacaagttcaatctgctcattttcatgctgcagaaacttttctcccttgtagatggtacg
tcagtgttggacaaccctgattctttacaaaatcaggaggttttactccctggacatctg
attacactttatcttaaggaaaaactagaagattggttgcaaagtggaaaagatgagatg
aagagaaaaagcgggacgtttgatttcagtgaaatttttgtagttaagaagtgttttgat
aaaactccagcaagagctatcagtacatcaattgagaatatgttgaaaactggaagattg
gttaccaacacaggtctggatctgcagcagagggcgggctatacagttcaggctgataga
ctgaactacttgcgcttcctctcacattttcgtgctgttcatcgaggggcctcatttgct
ggactccgtactacaactgtgcggaagctgttgcctgaatcttggggttttctttgccct
gtccacacacctgatggggagccctgtggattgttgaatcatatgacttgcacttgtagg
attacgtcatattttgactcccaaggaagcattaaagattattttaaaattaaaatatct
atcctcgatattttagttgacagtggaatgacacaattagtgccaaagctacttctacct
ggcccacctgaagttcttactgttcttttagatggttgcattgttggttgtatcccttct
ggtgaagttgagaaaattgtggctcacattcgagaattaaaagtgtcatcttctgcaatg
attcctgatgatctcgaagtgggatatgttcctttgagcatgggtggagcatatcctggt
ctctacctcttcacttctccttcaagatttgttcggccagtgagaaatatatcaattctt
tccaatgaaaacaaaaacattgacctcattggaccatttgaacaggtttttatggagata
cgatgtcctgatggtggagatggtggaagaaagagttcatttcctgcaactcatgaggaa
attcatccaacaggaatgcttagtgtagttgctaatcgtacgccatggtcagatcataat
cagagtccacgaaatatgtatcagtgtcagatggcaaagcaaacaatggcattctcgtca
caaacaattcagcatcgtgctgatcaaaagttatatcatcttcagactccccaaactccc
atcgttcgcacaagcacatataccaaatacaacattgatgaatatccaacaggcacaaat
gctatagttgcagttctggcatatacaggatatgatatggaggatgccatgattctaaat
aagtcatcagtagaacgtggaatgtttcacggacaaatttatcagactgaaactgttgac
ttgactgaacaaggcagcaggtctgacccatcttcaagaatgttcagaaaaagtaacata
gagaagtccaagcttgattcagatggacttccacatgttggtcagatgatacggccagat
gaaccctactgtagcatttataatgcttcaacgagttccacgcacaccttaaaaaaaaag
ggttctgaacctgtttatgttgactatgttgctgttgatgtaaaaaacaagaaggacctt
caaaaggttaatattcgttttcgacatccgcggaacccggtgattggtgataaatttagt
agtaggcatggacagaaaggtgtttgctctcagttgtggccagatgttgatatgccattt
tgtggaactactgggatgcgcccagatctcattatcaatcctcatgcatttccttctcgg
atgacaattgccatgcttctggaatctgttgctgctaagggaggtagcctacatggagaa
tttgtaaatgcaactccatttcgtggttcagtgaagaaagataatggggaatctgaaaag
tcaggtttgctccttgatgatcttggtcaaatgctaagagaaaagggatttaactatcat
ggtttagaggttctgtacagtggggtttacgggaaagaattaacatgcgagatattcatt
ggacctgtttattatcagcggctacgccacatggtttcagacaaatttcaggttcgatct
accggcacagttgaccaggttacacggcagccaataaaaggacgaaagcgtggtggtggg
atccgatttggtgaaatggaacgcgactctctactcgcacatggtgctgcatatcttctt
catgataggctgcacacttgttctgattatcacattgctgatgtatgttccctttgtgga
agcatgcttgcaacatcatttatccagcctcagaagcttccgaggcgcgagattggtggg
ctgcccccaagaaaagctccgaaaaaggtcatctgtcatgcttgccaaaccagtaaaggc
atggagacagttgccatgccctatgtgtttagatatttggcagctgagtttgcagcaatg
aacattaaaatgactcttaaactaaataatggagctagcgcctgatat
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