KEGG   Lotus japonicus: Lj5g3v0975900.2
Entry
Lj5g3v0975900.2   CDS       T04348                                 
Symbol
Lj5g3v0975900.2
Name
(Kazusa) -
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
lja  Lotus japonicus
Pathway
lja03020  RNA polymerase
lja03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Lj5g3v0975900.2 (Lj5g3v0975900.2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    Lj5g3v0975900.2 (Lj5g3v0975900.2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lja03021]
    Lj5g3v0975900.2 (Lj5g3v0975900.2)
   03400 DNA repair and recombination proteins [BR:lja03400]
    Lj5g3v0975900.2 (Lj5g3v0975900.2)
Transcription machinery [BR:lja03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     Lj5g3v0975900.2 (Lj5g3v0975900.2)
  RNA polymerase III system
   RNA polymerase III
     Lj5g3v0975900.2 (Lj5g3v0975900.2)
  RNA polymerase I system
   RNA polymerase I
     Lj5g3v0975900.2 (Lj5g3v0975900.2)
DNA repair and recombination proteins [BR:lja03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Lj5g3v0975900.2 (Lj5g3v0975900.2)
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
LinkDB
AA seq 144 aa
MVEILFDDIFRVEKLNPDDKKLFEKVTRIEARSERFDMFMHLDINSELYPLKVGQKFALL
LVPTLNPDGTPDTGYYIPGNRQSLADNFEYVMYGKLYKISEGSGREKAELNISFGGLLMM
MKGDHSHCNKFELDQRLYLLMRKV
NT seq 435 nt   +upstreamnt  +downstreamnt
atggttgagattctctttgacgatatctttagagtggaaaaattaaacccagatgacaag
aaattatttgagaaagttacccgcattgaagcaagaagtgaaagatttgacatgtttatg
cacctagacatcaattctgagttatatccgttaaaggtgggtcagaaattcgctctttta
ctggttccaacactgaatccagatggtaccccagacactggctactatattccgggcaat
cggcaatcactggctgataattttgaatatgttatgtatggcaagctctacaagatatca
gaaggttcaggacgtgaaaaagcggagttaaatatttcatttggtgggcttctgatgatg
atgaagggagatcactctcattgcaacaagtttgagcttgatcaaaggttgtatcttctg
atgaggaaagtctga

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