Lactobacillus johnsonii DPC 6026: LJP_1000c
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Entry
LJP_1000c CDS
T01960
Name
(GenBank) ABC transporter ATPase and permease components
KO
K18104
ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:
7.6.2.2
]
Organism
ljh
Lactobacillus johnsonii DPC 6026
Pathway
ljh01501
beta-Lactam resistance
ljh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ljh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LJP_1000c
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LJP_1000c
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ljh02000
]
LJP_1000c
01504 Antimicrobial resistance genes [BR:
ljh01504
]
LJP_1000c
Enzymes [BR:
ljh01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
LJP_1000c
Transporters [BR:
ljh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LJP_1000c
Antimicrobial resistance genes [BR:
ljh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AbcA [MD:
M00700
]
LJP_1000c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_membrane_3
SbcC_Walker_B
RsgA_GTPase
AAA_29
NPCC
DUF1206
Motif
Other DBs
NCBI-ProteinID:
AEB93326
LinkDB
All DBs
Position
complement(1077555..1079306)
Genome browser
AA seq
583 aa
AA seq
DB search
MDRGRPRIEKGKHSFSFQDFFKLINQVHPKYWQLIVGILAGLIATGANLIVPQFAQRIIN
NFKHLNINLVIITGIVFFGGVIISALSGYILGVFGEHVVSKLRDNLWARLLKMPVSYFDN
TSTGEISSRLVNDTSQVKNLLANTLPNAITSLLQFFGAVVIMFMMDWQMSLIMVLAVPLV
IFVLLPFMRLSGKIGRARQDELAKFSSDSTNVLSEIRLVKSSNSEKKELATGTKRIAKLY
AIGVKESWINSLMQPISNMLMMILVIGILTYGAIRVMQGTLTMGALISFLMYLFQLMGPV
IIISQFFNELAKTSGSTERIGEMLNEPIEVSADNQKVDIAGKELKLQNVSFSYEKGKQIL
HDINVSAKPNTVVAFAGPSGGGKSTIFSLIERFYKPTSGKITIGGQNIEEIDLTDWRKQI
GLVGQNSSVMPGTIRENLVYGLGRKVSDDELWHVLKMAYADKFVKEAEDGLETQIGERGV
KLSGGQRQRIAIARAFLRDPKILMLDEATASLDSESEAMVQKALASLMKNRMTLVIAHRL
STIVDADKIYFIDHGTVSGSGTHDELVKSTPLYAEYVHNQFKK
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggatagaggaagaccccggattgaaaaaggaaaacatagttttagttttcaggatttt
tttaaattaataaatcaagtgcatcctaaatactggcaattaattgttggtattctggct
ggcttaattgccacgggagcgaacttaatcgttcctcaatttgcacaaagaattattaat
aactttaagcatttaaatataaacctggtaattattactggaatagtattttttggtgga
gtaattattagtgccttatctggttatattttgggagtttttggagagcatgtggtttcg
aaacttcgtgataatctctgggctcgcttacttaagatgccagttagttattttgataat
acttcgacaggtgaaatttcatcaagactagttaatgacacgtcacaagtcaagaattta
cttgctaataccttgccgaatgcaattacttctttattacaattctttggtgctgtcgtc
atcatgtttatgatggattggcagatgtccttaatcatggttcttgctgttcctttagtg
atatttgtcctactaccatttatgagattgtcaggaaaaattggccgggcacgtcaagat
gaactggcaaaattttctagtgattcaactaatgttttaagtgagatccgtttggtaaaa
tcaagtaattcagagaagaaggagcttgctacaggaacaaaaagaattgctaaactttat
gcaattggggtaaaggaatcatggattaattccttaatgcagccaatttctaatatgtta
atgatgattttagtaattggtattttaacttacggtgctattcgtgttatgcaaggtaca
cttactatgggtgcacttatttccttcttaatgtatctatttcaattgatgggtccagta
atcataattagtcaatttttcaatgaattagctaagacgtcaggttcaactgaacgtatc
ggcgaaatgcttaatgaaccaattgaagtatctgccgataatcaaaaggttgatattgct
ggaaaagaattgaagctgcagaatgtaagtttctcatatgaaaaaggaaagcaaattcta
catgatatcaatgtgtcggctaagcctaacactgttgtcgcctttgctggtccatcaggt
ggtggaaaatcaacaattttttcactaatagaacgtttctataaaccaacttcgggaaag
ataactattggtggtcaaaatatagaagagattgatttaactgattggcgtaaacaaatt
ggacttgtaggtcaaaattcatcagtaatgcccggaactattcgtgaaaatctggtttat
ggcttaggaagaaaagttagtgacgatgaattatggcatgttttaaagatggcatatgca
gataaatttgtaaaagaggcagaagatggcttagaaacacagattggtgaacgaggtgtt
aagctgtctggtggacaaagacagagaattgcaattgcgagggcctttttgcgtgatccg
aaaatcttaatgcttgatgaggctactgcaagtcttgattcagaatctgaagctatggta
caaaaagccttagcaagtctgatgaaaaatagaatgactttagtaattgctcaccgttta
agtacaattgttgatgcagataaaatttatttcattgatcatggaactgtttccggctca
ggtactcatgatgaactagtaaaatcaacacctctttatgcagaatacgttcataatcaa
tttaaaaaatag
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