Lactobacillus johnsonii NCC 533: LJ_0223
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Entry
LJ_0223 CDS
T00158
Name
(GenBank) DNA-directed RNA polymerase delta chain
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
ljo
Lactobacillus johnsonii NCC 533
Pathway
ljo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ljo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LJ_0223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ljo03021
]
LJ_0223
03400 DNA repair and recombination proteins [BR:
ljo03400
]
LJ_0223
Transcription machinery [BR:
ljo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LJ_0223
DNA repair and recombination proteins [BR:
ljo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LJ_0223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
AAS08204
UniProt:
Q74LG3
LinkDB
All DBs
Position
257288..257830
Genome browser
AA seq
180 aa
AA seq
DB search
MGLDDFQGQNKDELSMIEVARAILQDSGKRMAFADIVNAVQNFLGKSDEEIRERLPQFYT
DMNTDGEFISMGHNVWALRSWFPYESVDEEVNHPEDEEDVPRKKHHKKVNAFIGDSDDDD
IIDYDSDDPEDEDLDVDEEDTNEDDYSDDDLDDADDNELDDGIEGQLSELHQDDLDDDDE
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
gtggggttagatgattttcaaggccaaaataaagacgaattgtcaatgatcgaagttgct
cgtgcaattttacaagatagcggcaagcgaatggcctttgctgatatcgttaacgccgtc
cagaactttctgggtaagagtgacgaagaaattcgtgagcgtttgccacaattttacact
gatatgaacactgatggtgaattcatttcaatgggtcataatgtttgggcattgcgttct
tggttcccatatgaatctgttgatgaagaagtaaaccatccagaagatgaagaagatgta
ccacgtaagaaacaccacaagaaagttaatgctttcattggtgattctgacgatgatgat
attatcgactacgattcagatgatccagaagatgaagatttggatgttgacgaagaagat
actaatgaagacgactactcagatgatgatcttgatgatgccgatgacaatgaattagat
gatggtattgaaggccaattatctgaacttcatcaagatgatcttgatgacgatgatgag
taa
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