Lactococcus lactis subsp. cremoris UC509.9: uc509_2105
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Entry
uc509_2105 CDS
T02415
Symbol
polC
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lli
Lactococcus lactis subsp. cremoris UC509.9
Pathway
lli03030
DNA replication
lli03430
Mismatch repair
lli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
uc509_2105 (polC)
03430 Mismatch repair
uc509_2105 (polC)
03440 Homologous recombination
uc509_2105 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lli03032
]
uc509_2105 (polC)
03400 DNA repair and recombination proteins [BR:
lli03400
]
uc509_2105 (polC)
Enzymes [BR:
lli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
uc509_2105 (polC)
DNA replication proteins [BR:
lli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
uc509_2105 (polC)
DNA repair and recombination proteins [BR:
lli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
uc509_2105 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
DNA_pol3_a_NI
DNA_pol3_a_NII
HHH_6
tRNA_anti-codon
RNase_H_2
HHH_3
DEDDh_C
Rv2179c-like
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AFW92526
LinkDB
All DBs
Position
complement(2077313..2082211)
Genome browser
AA seq
1632 aa
AA seq
DB search
MENLFEKLMDQIKMPPNLRRSRQFEHADIENVEVHTASKLWHFQLIFDEILPIDTYKLLT
ELTETAFSTIARTEISVSSREIVIDEQNLNDYYQYALTLPELCDSAFSSIFKKYHLELQE
EKIQLMVEDNPRMDFFVEKYFPILEEKFADFGFGKLKIIPVVDQQLTDLQVAAHAEKVAD
RLAAQTAEQAQVSELKKQRSEERESKNTREAKPEFVETALSDGIFFGRKISGQSPITSMS
FIAGEGFGVIFEGLVFEAAHREFTGKESGKVNHILELKMADETSTFMISKWGRKDEEIAQ
FDQIVSTVKAMNEKILTDGADNFTDSLSDALWLRVQGNIEHDKYKDDLVMTANAVVEIKP
KPTIDRVALQIKAVKSDKIQLGREIKNNEPVTPMRSVSEFSTNGPVVFEGYVFKGELREI
KSRKTGNISYLLEFEMTDYTSSFYVQKWLRGEEEIQLAKQIKAGLWCRVRGNVQRDNFKN
DLVLQLTDLIEIPTQNVREDKSDEKRVEFHAHTNMSQMDAIPSASSLVAQAAKWGHKAIA
ITDHGGLQSFPEAHSAGKKNGVKIIYGVEANLVEDKIPIVFNETDVDMYESTYVVFDVET
TGLSAVHNDLIQIAATKMHKGNPIDEFDEFINPGYRLSEFTTELTGITDDHVKNAKPLYE
VLTKFQKFCEGTILVAHNASFDVGFMNMNYSRNGLPIISQPVVDTLEFARNLYPEMKRFG
LGQLTKKFQIGLEHHHMANFDAEATGRLLFVFLEELRTRNTGWTSLLELNAKLVSEDSYK
KVRPKHVTLYAKTQEGLKNLFKIVSFGNVKYYAGLPRSVLEANREGLLVGSACEVGEVFD
AAINKTFEETLEIAKFYDFIEVFPPALYRSLVVGGSFKSEKELEQTLKDLIKIGKTLGKP
VLATGNLHYLNPEDAIYREIIVRSLGLGAEINWTQGHGEHAKPLPLPEAHFRTTDEMLEA
FSFLDEKTAREIVIDNTQKMADEFDVLTPVRDDLYTPKMVFDGGETSEERIVRLTYEKAH
EWYGNPLPDIIDARLEKELRSILGNGFSVVYIISQELVKRSNERGYIVGSRGSVGSSLVA
TMIGITEVNPLAPHYRCPECQYFECYDDGSFGSGYDMPDKNCPKCDHKLIKDGHDIPFET
FLGFKGDKVPDIDLNFSGDDQPLAHLDVRDIFGEDYAFRAGTIGTVAEKTAFGFVKGYER
DYDQFYGNAEIDRLAAGSTGVKRTTGQHPGGIIVIPNYMDVYDFSPVQFPADDVNAEWQT
THFDFHAIHDNILKLDILGHDDPTMIRKLQSLSGIVPQDIPMDDPGVMKLFTGTESLGLT
EEQLGVKLGTLGIPEMGTFTSMNMIAEAKPKNFADLLQISGLSHGTDVWSGNAQDLIRSG
IADLSSVIGCRDDIMVYLIHKGLENGLAFTIMERVRKGMWNKIPAEEREKYVEAMREHEV
PEWYIESCSKIKYMFPKAHAAAYIMMALRVAYFKVHHPIFYYCAWFSIRATAFDIGVMGA
GLEAVKSKMKEIKDKGFEATNVETNLYTTLELCNEMLERGFTFGKIDLYRSEATEFVIDG
DTLIPPFVTMDGLGENVAKQIVAARAEGEFLSKMELRKRGGVSQTIIENMTNMGVLEGMP
DDNQLSLFDDFF
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctttttgagaaattgatggatcagatcaaaatgccaccaaacttgcgtcgt
tctagacagtttgagcatgctgatattgaaaatgttgaagtgcatacggcaagtaagctc
tggcactttcagttaatttttgacgagattttaccaattgacacatataaattactgaca
gaattgacagagacagctttttctacaatcgctcgtacagaaatttctgtcagtagccgt
gaaatagtcattgacgagcaaaaccttaatgattattatcaatatgcgctgacacttcct
gaactttgtgattctgctttttcaagtatttttaagaaatatcatcttgaattgcaggaa
gaaaaaattcagttgatggttgaagataatccacgaatggacttttttgttgaaaaatac
tttccaattttagaagaaaaattcgcagattttggtttcggaaaattaaaaattattcca
gtggttgatcaacaattaaccgacttacaggtggctgctcatgccgaaaaagtagccgat
cgcttggccgctcaaacggcagagcaagctcaagtttcggagcttaaaaaacaacgctca
gaggaacgtgaaagtaaaaatactagagaagccaaaccagaatttgtagagacggcactt
tctgatgggattttctttggtcgaaaaattagtggacaaagtccaattaccagtatgtct
ttcatcgctggggaaggctttggggttatctttgaaggtcttgtttttgaggccgcacat
cgcgaatttacaggaaaagaatcaggtaaagtcaatcatattttagaattgaaaatggct
gatgaaacatcaacctttatgatttccaaatggggtcgtaaggacgaagaaattgcacaa
tttgaccaaattgtcagcaccgttaaagccatgaatgaaaaaattcttactgacggagcg
gataattttactgacagcctatctgatgccctttggttacgtgtgcaaggaaatattgaa
cacgacaaatataaagatgacttagtaatgacggcaaatgcggttgttgaaattaaacct
aaaccaaccattgaccgtgttgctctccaaatcaaagctgtaaaatcagataaaattcaa
ctgggtcgtgaaatcaaaaataatgagccagtcactccgatgcgttctgtcagtgaattt
tctactaacggtcctgttgtttttgaaggttatgtcttcaaaggggaactccgcgaaatc
aaatcacgtaaaacaggaaacatcagttatcttcttgaatttgaaatgactgattacacg
tcaagtttttatgtgcaaaagtggttacgtggcgaagaagaaattcaattggccaaacaa
attaaagcgggactatggtgtcgagttcgcgggaatgttcaacgggacaatttcaaaaat
gatttagtgctacaattgactgatttgattgaaattccgacacaaaatgttcgtgaagat
aagtctgatgaaaaacgtgttgagtttcatgcccatactaatatgagtcaaatggacgcg
attccgtccgcttcaagtttagttgctcaggctgcaaaatggggacataaagccattgca
attactgaccatgggggcttgcaatctttccctgaggctcactcggcaggtaaaaagaat
ggggtcaagattatttatggagtcgaggccaatcttgtcgaagacaaaatcccaattgta
tttaatgaaacagatgttgatatgtatgaatcaacatatgtcgtctttgacgtcgaaaca
acaggtctttcagcagttcataatgatttgattcaaattgcagcaacaaaaatgcacaaa
ggaaatcccattgatgaatttgatgaatttattaatccgggttatcgtttaagcgaattt
acaacagaactaaccggaattactgatgaccatgtcaaaaatgcgaaaccgctttatgaa
gtactgacgaaatttcaaaaattttgcgaaggaacaattcttgtcgctcataatgcatcc
tttgacgtgggcttcatgaatatgaactattcacgaaatgggctgccgattattagtcaa
cctgtcgttgatactcttgaatttgcccgtaatctctatcccgaaatgaaacgttttggt
ttaggacaattgaccaagaagtttcaaatcggacttgaacatcaccatatggccaatttt
gatgcggaagcaactgggcgtttgctctttgtattcttggaagaattacggaccagaaac
acagggtggacaagtctgttagaacttaatgccaagttggtcagtgaagattcttataaa
aaagtacgaccaaaacacgtgactttatatgctaaaacacaagaaggacttaaaaatctc
ttcaagattgttagttttggaaatgtgaaatattatgctggtcttcctcggtcagttttg
gaagccaatcgcgagggattacttgttggttcagcctgtgaagtcggcgaagtcttcgat
gcagcgattaataaaacttttgaagaaacgcttgaaattgctaaattttatgatttcatt
gaagttttcccaccagcactttatcgctcacttgttgtcggcggctctttcaaatcagaa
aaagaattggaacaaacgcttaaagatttgataaaaatcggaaaaacgcttggcaagcca
gttctggccacaggaaatctccattatctgaatccggaagatgccatttatcgtgaaatt
attgtccgctcacttggtcttggggcagaaattaactggacacaaggacacggggagcat
gcaaaacctcttccattacctgaagctcactttagaacaactgatgaaatgcttgaagcc
tttagttttcttgatgagaaaacagcgcgtgaaattgtcattgacaatacccaaaaaatg
gctgatgagttcgatgttctcactcctgttcgtgatgatttatatacacctaaaatggtc
tttgacggaggagaaacctcagaagagcggattgttcgcttgacttatgaaaaagctcac
gagtggtatggaaatccattgccagatattattgatgcaaggcttgaaaaagaactgcga
tcgattttggggaatggtttctcagtcgtgtatattatttcgcaagaacttgtaaaacgt
tccaatgagcgcggatatattgttggttctcggggatcagtaggttcgtcactggttgcg
accatgattggaataaccgaagtaaatccactggcacctcattaccgttgcccagaatgt
caatattttgaatgctatgatgatggatctttcggttcaggttatgatatgccggataaa
aattgtcctaaatgtgaccacaaactcatcaaagatgggcatgatattccttttgaaact
ttcttaggtttcaagggagacaaagttcccgatattgatttgaacttttcaggggatgac
caacctttggctcacttggacgttcgtgatattttcggggaagattacgcttttcgggca
ggaacaattggtacggttgccgaaaaaacggcttttggtttcgtcaaaggctacgaacgt
gactatgaccaattttatggaaatgctgaaattgaccgtttagctgccggatcgacgggt
gtcaagcgaacaacaggtcaacacccaggagggattattgttattccaaattacatggat
gtttatgatttttctccagttcaatttccagccgacgatgtcaatgccgaatggcaaacg
actcactttgatttccatgccattcatgataatatcttgaaactcgatattcttggacat
gatgatccaacgatgattcgaaaattgcaaagtctttctggtattgttcctcaagacatt
ccgatggatgaccccggagtgatgaaacttttcaccgggacagaatctttaggtttgacc
gaagagcaattgggagtaaaactcgggactcttggaattcctgaaatgggaacttttacc
tcaatgaatatgattgccgaagccaaacccaaaaactttgctgatttactgcaaatttct
ggactttcccatggaacagacgtatggtcaggaaatgcccaagatttaattcgttcagga
attgccgacctttcaagtgttatcggttgtcgggatgatattatggtctatctcatccat
aaaggacttgaaaatggtcttgcttttacaattatggagcgtgtacgtaagggaatgtgg
aataaaattcctgccgaagaacgtgagaaatatgtggaagccatgcgagaacatgaggtt
ccagaatggtatattgagtcttgttctaagattaaatatatgttccctaaagcccatgcg
gcagcttatattatgatggctctgcgggtggcttatttcaaagtacatcatccaattttc
tattactgcgcatggttctctatcagggcaacggcctttgatattggtgtcatgggggct
ggtcttgaagcagtcaaatcaaaaatgaaagaaattaaggataaaggttttgaggctaca
aatgtggaaactaacctttatacaactttggaactctgtaatgaaatgttagagcgtggc
ttcacttttggtaaaattgacctttaccgctctgaggctacggagtttgtcattgacggt
gacactttgattccgccatttgtaacgatggacggattgggtgaaaacgtggcaaaacaa
atcgtcgcagcgcgtgctgagggtgaatttttgagtaagatggaacttcgtaaacgtggg
ggagtttcacaaaccattattgaaaacatgaccaatatgggcgttcttgaaggtatgcct
gatgataatcaattaagcttatttgatgatttcttttga
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