Lactococcus lactis subsp. lactis IO-1: lilo_1141
Help
Entry
lilo_1141 CDS
T02485
Symbol
hsdM
Name
(GenBank) putative type I site-specific deoxyribonuclease
KO
K03427
type I restriction enzyme M protein [EC:
2.1.1.72
]
Organism
lls
Lactococcus lactis subsp. lactis IO-1
Brite
KEGG Orthology (KO) [BR:
lls00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
lls02048
]
lilo_1141 (hsdM)
Enzymes [BR:
lls01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.72 site-specific DNA-methyltransferase (adenine-specific)
lilo_1141 (hsdM)
Prokaryotic defense system [BR:
lls02048
]
Restriction and modification system (R-M system)
Type I R-M system
lilo_1141 (hsdM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N6_Mtase
HsdM_N
MTS
AviRa
Eco57I
Motif
Other DBs
NCBI-ProteinID:
BAL51140
LinkDB
All DBs
Position
complement(1228273..1229856)
Genome browser
AA seq
527 aa
AA seq
DB search
MSTTLNNQLWASADILRGKMDASEYKNYLLGLIFYKYLSDVELREVYEQENGQTTEFPER
EEQFKILKDWYDEDKDDLEEIMRLQRGYFIAPEQLFYHFRQKADAYEFRLVDLQSGFNDL
ERQGDQFSNLFADIDLNSTKLGSNDQQRNVTITEVIKALDEIDLFEHNGDVIGDAYEYLI
GQFAAGAGKKAGEFYTPQAVSRIISEITSIGQENRAPFHIYDPTMGSGSLMLNIRNYVHD
KDKIHYHGQELNTTTFNLARMNLILHGIDKGRMRLKNGDTLDSDWPTEEPHQFDAVVMNP
PYSAKWSAAEKFLSDARFERYGKLAPKSKADLAFLLHGFYHLKDTGTMGIVLPHGVLFRG
AAEGVIRKALLEMGAIDAVIGLPANIFYGTSIPTTVIILKKNRNNRDVLFIDASNDFEKQ
KNQNMLRDSDIEKIIKTYKSRENVEKYAHLASFEEIESNDFNLNIPRYVDTFEEEEPIDI
IALSQEIVDINQEISKTEQEFLSMLNQLAVTDDSREIIEATKRIFGE
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaacactaaataatcaactttgggcatcagcggatattctccgcggaaagatg
gatgctagcgagtataaaaactatctcttaggtttaattttctataaatatctatcagat
gttgaactacgtgaagtttatgaacaagaaaatggtcagacaacagagttcccagagcgt
gaggaacagttcaaaatcttgaaagattggtatgacgaagataaagatgatcttgaagaa
attatgcgtctacaaaggggttatttcattgctcccgaacagcttttttatcattttcgc
caaaaggcagatgcttatgagtttagattggtcgacttgcaatcaggctttaacgacttg
gagcggcaaggggaccagttcagtaacctctttgcggatattgatttaaattcaacaaaa
cttggctctaatgatcaacaaagaaatgttacgattactgaagtgatcaaagcacttgat
gaaatagatcttttcgaacataatggagacgtaataggtgatgcttatgagtatctgatt
ggacagtttgcagcaggagcaggaaaaaaagctggtgaattttatactcctcaagctgtt
tctcgcattatttcagagatcacttcaattggtcaagaaaatagagcaccttttcatatc
tatgacccaacgatgggatctgggtcactcatgctgaatattcgtaattacgttcatgat
aaagataaaattcattatcatggtcaagagttgaatacaacaactttcaacttggcacga
atgaatcttattttgcacggtattgacaaaggaagaatgcgtcttaaaaacggggatact
ctagatagtgattggccaacagaagagcctcatcagtttgatgctgtcgtcatgaatccc
ccttactcagcaaaatggtctgcggctgaaaagtttctctctgatgcacgttttgagcgt
tatgggaaattagctcccaaatcgaaagcagatttagctttcttacttcatggtttctat
cacttaaaagatactgggacaatgggaattgttttacctcatggtgtcttattccgagga
gcagcagaaggtgtgattcgtaaagccttgcttgaaatgggtgcaatcgatgcagttatt
ggcttacctgctaatattttttacggaacaagcataccgacaacagtaattatcttgaaa
aaaaatcgtaataatcgtgacgttttgtttattgatgcttcaaatgattttgaaaaacaa
aaaaatcagaacatgcttcgcgatagtgatatcgaaaaaatcattaaaacttataaatca
cgtgagaatgttgaaaaatatgcccatttagcaagttttgaagagatagaatcaaatgat
ttcaatcttaatattccacgctatgttgatacttttgaagaagaagaacctattgatatt
attgcactaagtcaagaaattgtagacattaatcaagagattagtaagacagaacaagaa
ttcctctcaatgttaaatcaacttgcggtaacagatgatagtcgtgagattattgaagct
actaaacgaatttttggagaatga
DBGET
integrated database retrieval system
