Lutra lutra (Eurasian river otter): 125087185
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Entry
125087185 CDS
T08100
Name
(RefSeq) Fanconi anemia group J protein-like isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03440
Homologous recombination
llv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125087185
03460 Fanconi anemia pathway
125087185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
llv03400
]
125087185
Enzymes [BR:
llv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
125087185
DNA repair and recombination proteins [BR:
llv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
125087185
FA (Fanconi anemia) pathway
Downstream FA components
125087185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
DUF4769
Motif
Other DBs
NCBI-GeneID:
125087185
NCBI-ProteinID:
XP_047563182
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All DBs
Position
16:34647888..34836205
Genome browser
AA seq
1198 aa
AA seq
DB search
MMSSVWSEYTIGGVKITFPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCS
ALAWQQSLSGKPVDESLSKKPEVPPSCCCACHSKNFTNIDLNQGTSHHFNSPSTPPSERN
DTSSTYQDSPEKTTLAAKLSAKKQASIKRDENDDFQVEKKRIRPLETTQQIRKRHCFEKE
VHHLDAKVASGKTTKLNSPLGKINSFSPQNTPGHCSRCCCSTKQGSSQDSSNATKKDHGG
KSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCM
ELLDGKNGKSCYFYHGVHKISDQHTLQTLQGMCKAWDIEELVSLGKKLKACPYYTARELI
EDAHIIFCPYNYLLDAQIRESMDINLKEQIVILDEAHNIEECARESASYSVTEVQLRFAR
DELDSMVNNNIRKKDHEPLRAVCYSLINWLEANTEHLVERDYESSCKIWSGSEMLLNLHK
MGITTATFPILQGHFSAVLQKEEKVLPIHGKEEARVVPIISASTQIMLKGLFMVFDYLFR
QNSRFADDYKVAIQQTFSWINQIDTSDKNGFFALAKNKKHSRRKTAVHVLNFWCLNPAVA
FSDINGRVWTIVLTSGTLSPMKSFSSELGVTFTIQLEANHIINNSQVWVGTIGSGPKGRN
LCATFQHTETFEFQDEVGELLLSVCHTVRQGILCFLPSYKLLEKLKERWLYTGLWHNLEL
VKTVIVEPQGGGKTDFDELLQVYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAV
ITIGIPFPNVKDLQVELKRQYNDQHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKSDW
GALILVDDRFRSNPSRYISGLSKWVRQQIQHHSTFESALESLAEFSKKHQKVIDVSREDR
KFIQDSESTLEVTCLKDSSLTYLSEVTSPLAPENPRKDEAKACVHEHQCHKITKSPSLPR
GIISRKERDDPVLFEESPQAVKAENTVISRSTSPTFNKQTKRASWSSFNSLGHYLTDEII
TAAPQFRLPEDCASSVSAFETEKGCKTVIPLTDKCEPSALMVNASFGPCPQSEITSSSIK
IDSTLLKRNDSKQLFCCEEALDPDPELSPVGEEAKLSTSHRASETEAEDESIYFSPELYD
PMDTNEEKNELVESDRDNRLANHSNCILVEDLFEIKTMKGVDSVQEMKAEDCTDTKLN
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttcggtttggtctgaatatacaattggtggggtgaagattacctttccttat
aaagcatacccatcacagcttgctatgatgaattctattgtcagaggattaaatagtaag
caacattgtttgttggagagccctacaggaagtgggaaaagcttagccttactttgttct
gctttggcatggcaacagtctcttagtgggaagccagtggatgaaagcttaagtaaaaaa
cctgaagtaccaccatcatgttgttgtgcatgccattcaaagaattttacaaacattgac
ttgaaccaaggaacttcacatcatttcaacagtccaagtacaccaccttctgaaagaaat
gacacttcatcaacttatcaagactctcctgaaaaaactacgctggctgcaaagctatct
gccaagaaacaggcatccataaaaagagatgaaaatgatgattttcaagtagagaagaaa
agaattcgacccttagaaactacacagcagattagaaagcgtcattgttttgaaaaggag
gtacatcatttggatgcaaaagttgcttcaggcaagaccacaaaactcaactctccatta
ggaaagataaattccttttctccacaaaatacccctggtcactgttccaggtgttgttgt
tctactaaacaaggaagcagtcaagattcctcaaatgccactaagaaggatcatgggggg
aaatccaagatacccaaaatatattttgggacacgcacacacaaacagatagctcagatt
actagagaactccggaggacagcgtactcaggggtcccaatgactattctctccagcagg
gatcatacttgcgtccatcctgaagtagtaggtaacttcaacagaaatgaaaagtgcatg
gaattgctggatggaaaaaatggcaaatcctgctatttttatcatggtgtacataaaatt
agtgatcaacacacattacaaactcttcaagggatgtgcaaagcctgggatatagaagaa
cttgtcagcttggggaaaaaactaaaggcatgtccgtattacacagcacgagaactaata
gaagatgctcacataatattttgtccttacaactatcttctagatgcacaaataagggaa
agtatggatatcaatctcaaagaacagattgtcattttagatgaagctcataacattgaa
gagtgtgctcgggaatcagcaagttacagtgtaacagaagttcagcttcggtttgctcga
gatgaactagatagtatggtcaacaataatataaggaagaaagaccatgaacccctacga
gctgtgtgctatagcctaattaattggttagaagcaaacactgaacatcttgtggaaagg
gattatgaatcatcatgtaaaatatggagtggaagtgaaatgctcttaaatttacacaaa
atgggcattaccactgctacttttccaatattgcagggacatttttctgctgttcttcaa
aaagaagaaaaagtcttaccaattcatggtaaagaggaggcaagagtagtaccgattatt
agtgcatcaactcaaataatgctcaaaggactttttatggtgtttgactatctttttagg
caaaatagcagatttgcagatgattataaagttgctattcaacagactttttcttggata
aatcagattgatacttcagataaaaatggattctttgctctggcaaaaaataagaaacat
tcaagaaggaaaactgcagttcatgtgctaaacttttggtgcttaaatccagctgtggcc
ttttcagatattaatggcagagtttggacaattgttttgacatctgggacattatcacca
atgaaatccttttcatcagaacttggtgttacatttactatccagctggaggctaatcat
atcattaataactcacaggtttgggtaggcaccattgggtcaggccccaagggtcggaat
ctctgtgctaccttccagcacacagaaacatttgagttccaggatgaagtgggagaactt
ttgttatctgtgtgtcatactgtgcgccaaggaattttgtgtttcttgccatcttacaag
ttattagaaaagttaaaagaacgttggctctacactggtttatggcataatctagagttg
gtgaagacagtcattgtagaacctcaaggaggaggaaaaactgattttgatgaattactg
caggtgtactatgatgcaatcaagtacaaaggcgagaaagatggagccctcttggtagca
gtttgtcgtggtaaagtgagcgagggtctggatttctcagatgacaatgcccgtgctgtc
ataacaatagggattccttttccaaacgtgaaagatctacaggttgaactaaagcgacaa
tacaatgatcaacactcaaaattgagaggtcttttacctggtcgtcagtggtatgaaatt
caagcatatagggccttaaaccaggccctaggtaggtgtattcgacacaaaagtgattgg
ggagctcttattctagtggatgatcgcttcaggagtaatcccagtcgatatatatctgga
ctttctaaatgggtacggcagcagattcagcaccattcaacttttgagagtgcactggag
tccttggctgaattttccaaaaaacaccaaaaggtcattgatgtatccagagaggacaga
aagtttatacaggacagtgagtctacacttgaagtgacctgtttgaaggacagtagttta
acttacttatcagaggtgacaagtcctctagcaccagaaaatcctaggaaagatgaagca
aaagcgtgtgtccatgaacaccagtgtcataaaataactaaaagtccatctctaccaaga
gggatcatctctagaaaggaaagagatgatcctgtattatttgaagagtctccccaggca
gtgaaagcagaaaatactgtgatttccagatctacaagcccaaccttcaacaaacagaca
aagagagctagctggtctagctttaattctttgggacattatcttactgatgaaattata
actgcagctcctcagttcaggttaccagaagactgtgcctctagtgtttccgcttttgaa
acagaaaagggatgtaaaacagttattccactcactgataaatgtgagccctcagctctg
atggtaaacgcatcatttggaccatgccctcagtcagaaatcactagttcatcaataaag
attgattctactcttcttaaaagaaatgattccaaacaactattctgctgtgaagaagcc
ctggatccggaccctgaattgtctccagttggtgaagaagctaaactttccacctcacat
agagcttctgaaacagaagcagaggatgaatctatctatttttcacctgagctttatgac
cctatggatacaaatgaagaaaagaatgaactagttgaaagtgatagagacaatagattg
gctaatcattcaaattgcattttagttgaagatctttttgaaattaaaactatgaaagga
gtggattcagtccaagaaatgaaagctgaggattgcacagacacaaagttgaattga
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integrated database retrieval system
