KEGG   Lutra lutra (Eurasian river otter): 125088031
Entry
125088031         CDS       T08100                                 
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C isoform X1
  KO
K05211  glutamate receptor ionotropic, NMDA 2C
Organism
llv  Lutra lutra (Eurasian river otter)
Pathway
llv04020  Calcium signaling pathway
llv04024  cAMP signaling pathway
llv04080  Neuroactive ligand-receptor interaction
llv04713  Circadian entrainment
llv04720  Long-term potentiation
llv04724  Glutamatergic synapse
llv05010  Alzheimer disease
llv05014  Amyotrophic lateral sclerosis
llv05017  Spinocerebellar ataxia
llv05020  Prion disease
llv05022  Pathways of neurodegeneration - multiple diseases
llv05030  Cocaine addiction
llv05031  Amphetamine addiction
llv05033  Nicotine addiction
llv05034  Alcoholism
Brite
KEGG Orthology (KO) [BR:llv00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    125088031
   04024 cAMP signaling pathway
    125088031
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    125088031
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    125088031
   04720 Long-term potentiation
    125088031
  09159 Environmental adaptation
   04713 Circadian entrainment
    125088031
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    125088031
   05014 Amyotrophic lateral sclerosis
    125088031
   05017 Spinocerebellar ataxia
    125088031
   05020 Prion disease
    125088031
   05022 Pathways of neurodegeneration - multiple diseases
    125088031
  09165 Substance dependence
   05030 Cocaine addiction
    125088031
   05031 Amphetamine addiction
    125088031
   05033 Nicotine addiction
    125088031
   05034 Alcoholism
    125088031
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:llv04040]
    125088031
Ion channels [BR:llv04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   125088031
SSDB
Motif
Pfam: Lig_chan Lig_chan-Glu_bd SBP_bac_3 ANF_receptor NMDAR2_C
Other DBs
NCBI-GeneID: 125088031
NCBI-ProteinID: XP_047564897
LinkDB
Position
16:6162004..6179211
AA seq 1276 aa
MGGALGSALLLTSLLGAWAGLGPGQGEQAVTVAVVFGSSGPPHAQVRTRLTSQSFMDLPL
EIQPLTVGVNNTNPSSLLTQICGLLGAARVHGIVFEDNVGTEAVAQILDFISSQTHVPIL
SISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLE
GVRAVADASYLSWRLLDVLTLELGPGGQRAHIQRLLRQVDAPVLVAYCSREEAEVLFAEA
AQAGLVGPGHVWLVPSLALGSTDAPPAAFPVGLISVVTESWRLSLRQKVRDGVAILALGA
HGYQRQHGALPSPAGDCRGHPGPVSPAREAFYRHLLNVTWEGRDFSFSPGGYLVQPTMVV
IALNRHRLWEMVGRWDHGVLHMKYPVWPRYSASLQPVVDSRHVTVATLEERPFVIVESPD
PGTGGCVPNTVPCRRQNNQTFRSARMCGKAAVCCRAMAAVCGLRLGEGGWGPSAKPGGAA
GSDFWWSLGGSSGDTAPYTKLCCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKRVRGVW
NGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPY
SPSVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTSGKKSGGPSFTIGKSVWLLWALVF
NNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSDKKFQRP
QDQYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKFNQRSVEDALTSLKMGKLDAFIYDAA
VLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLALLQFLGDGETQKLET
VWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVYWKLRHSVPSTP
RLDFLLAFSRGIYSCFSGVQSLASPARPPSPDLTAGSAQASVLKMLQAARDMVTTAGVSS
SLDRAARTIESWGGGRRAPPPPACPGPRPPTPGPSPEPSPTGWGPAGGGRAAPGRRAPQP
PGRPPTPRPSLPDVSRVSGWAAREARQQLPVGRGGRLLSGSERRALPERPLSPERCHYSS
FPRADRSGRPFLPLFPEPPAPEDLPLLGPEQLARREALLRAAWARGSRPRHASLPSSVAE
AFAWPRSLPVGCGHPACVHLAPAPAMRLPSYREACQEGVWARVPAWPHRQHACLHAHAHL
PLCWGAVCPPLPPCASHSPWLTGAWGPPGHRGRTLGLSTGYRDSAGLEEVSRVACGTHGF
PGPCTWRRISSLESEV
NT seq 3831 nt   +upstreamnt  +downstreamnt
atgggtggcgctctggggtcagccctgctgctcacctcactcctcggggcctgggcaggg
ctgggcccgggtcagggtgagcaagctgtgacagtggccgtggtgtttggcagctcgggg
ccaccacacgcccaagttcgcacccgcctcacctcccagagcttcatggacctgcctctg
gagatccagccgctcaccgtgggcgtcaacaacaccaaccccagcagcctcctcacccag
atctgcgggctcctcggggcggcgcgcgtccacggcattgtctttgaggacaacgtgggc
accgaggccgtggcgcagatcctggacttcatctcctcccagacccatgtgcctatcctc
agcatcagtgggggctcggctgtggtcctcacccccaaggagccgggctccgccttcctg
cagctgggcgtgtccctggagcagcagctgcaggtgctgttcaaggtgctggaggagtac
gactggagcgcgttcgccgtgatcaccagcctgcacccggggcacgcgctcttcctggag
ggggtgcgcgccgtggccgacgccagctacctgagctggcggctgctggacgtgctcacg
ctggaactgggcccgggcgggcagcgcgcgcacatccagcgcctgctgcgccaggtcgac
gccccggtgctggtggcctactgctcgcgcgaggaggccgaggtgctcttcgccgaggcg
gcacaggccggtctggtggggcccggacacgtgtggctggtgcccagcctggcgctgggc
agcaccgacgcgccccccgccgccttccccgtgggcctcatcagcgtcgtcaccgagagc
tggcgcctcagcctccgccagaaggtccgcgacggcgtggccatcctggctctgggcgcc
cacggctaccagaggcagcatggtgccctgccatccccggctggggactgccgtggccat
cccgggcctgtcagccctgcccgggaggccttctacaggcacctactgaacgtcacctgg
gagggccgagacttctccttcagcccgggtgggtacctggtccagcccaccatggttgtg
atcgccctcaaccgccaccgcctctgggagatggtggggcgctgggaccacggcgtcctc
cacatgaagtacccagtgtggcctcgctatagcgcatctctccaacctgttgtggacagc
cggcacgtgacagtggccacgctggaagagcggccctttgtcattgtggagagccctgac
cccggcacaggcggctgtgtgcccaacaccgtgccttgccgcaggcagaacaaccaaacc
ttcaggtccgcgagaatgtgcgggaaggcagctgtgtgctgccgcgcgatggcagccgtg
tgtggtttgcgcttgggtgaggggggttgggggccatctgccaaaccgggaggagctgcg
ggctctgacttctggtggtctcttggtggcagcagcggtgacacagccccctacaccaag
ctttgctgtaagggtttctgcattgacatcctcaagaagctggccaaggtggtcaagttc
tcctatgacctgtacctggtgaccaatggcaagcatggcaagagggttcggggcgtgtgg
aacggcatgatcggggaggtgtactacaagcgggcagacatggccatcggctccctcacc
atcaacgaggagcgctccgagattgtggacttctctgtgcccttcgtggagacaggcatc
agcgtgatggtggcccgcagcaatggcaccgtctccccgtcggccttcctggagccctac
agcccttctgtgtgggtgatgatgttcgttatgtgtctcactgtggtggccatcacagtc
ttcatgtttgagtacttcagcccagtcagctacaaccagaacctcaccagtggcaagaag
tctgggggcccatccttcaccatcggcaagtctgtgtggctgctgtgggcgctggtcttc
aacaactcggtgcccatcgagaacccccgaggcaccaccagcaagatcatggtcctagtc
tgggccttctttgctgtcatcttcctcgccagctacaccgccaaccttgctgccttcatg
atccaggagcaatacattgacactgtgtccggcctcagtgataagaagtttcagcggcct
caggaccagtacccacccttccgctttggcacggtgcccaatggcagcacggagcggaac
atccgcagcaactaccgagacatgcacacccacatggtcaagttcaaccagcggtcggtg
gaagacgccctcaccagcctcaagatggggaagctggacgccttcatctacgatgccgct
gtcctcaactacatggcgggcaaggacgagggctgcaagctggtcaccattggctctggc
aaggtctttgctaccactggctacggcatcgccatgcagaaggactcccactggaaacgg
gccatagacttggcgctccttcagttcttgggggatggggagacccagaagctggagaca
gtgtggctctcagggatctgccagaacgagaagaacgaggtcatgagcagcaagctggac
atcgacaacatggctggcgtcttctacatgctgctggtggccatggggctggccctgctg
gtctttgcctgggagcacctggtctactggaaactgcgccactcagtgcccagcacgcct
cggctggacttcctgctggccttcagcaggggcatctacagctgcttcagcggggtgcag
agcctggccagccccgcgcggccccccagcccggacctgaccgccggctcggcccaggcc
agcgtgctcaagatgctgcaggcggcacgcgacatggtgaccacggcgggcgtgagcagc
tccctggaccgcgccgcgcgcaccatcgagagttggggcggcggccgccgcgcgcccccg
ccgcccgcctgccccggcccgcggccgcccacccccggcccgtcccctgagcccagcccc
acgggctggggaccggcaggcgggggccgcgccgcgccggggcgcagagccccgcagccc
ccgggccgccccccgacgcccaggccgtcgctgcccgacgtctcccgggtgtcgggctgg
gccgctcgggaggcgcggcagcagttgccggtcgggcgcggcgggcggctcctctcgggc
tccgagcggcgcgcgctcccagagcgccccctgtccccggaacgctgccactacagctcc
ttccctcgagccgaccggtccgggcgccccttcctcccgctcttcccggagcccccggcg
ccagaggacctgccgctactcgggccggagcagctggctcggcgggaggccctgttgcgc
gcggcctgggcccggggctcacgcccgcgccacgcttccctgcccagctcggtggccgag
gccttcgcctggcccaggtctctgcccgtggggtgcggccacccggcctgtgtgcacttg
gcgccggcgccggcgatgaggctgccgtcctaccgggaggcctgccaggagggcgtgtgg
gccagggtccccgcctggccgcacagacagcacgcctgcctgcacgcccacgcccacctg
ccgctttgctggggggctgtgtgcccccctctgccaccctgtgccagccacagcccctgg
ctcactggggcctgggggcctccggggcacaggggcaggaccctggggctgagcacaggc
tacagggacagtgcggggctggaagaggtcagcagggtggcctgtgggacacacggcttc
cctggaccttgtacctggaggcggatctccagcttagagtcagaagtgtga

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