Lutra lutra (Eurasian river otter): 125088031
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Entry
125088031 CDS
T08100
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C isoform X1
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04020
Calcium signaling pathway
llv04024
cAMP signaling pathway
llv04080
Neuroactive ligand-receptor interaction
llv04713
Circadian entrainment
llv04720
Long-term potentiation
llv04724
Glutamatergic synapse
llv05010
Alzheimer disease
llv05014
Amyotrophic lateral sclerosis
llv05017
Spinocerebellar ataxia
llv05020
Prion disease
llv05022
Pathways of neurodegeneration - multiple diseases
llv05030
Cocaine addiction
llv05031
Amphetamine addiction
llv05033
Nicotine addiction
llv05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125088031
04024 cAMP signaling pathway
125088031
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125088031
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
125088031
04720 Long-term potentiation
125088031
09159 Environmental adaptation
04713 Circadian entrainment
125088031
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
125088031
05014 Amyotrophic lateral sclerosis
125088031
05017 Spinocerebellar ataxia
125088031
05020 Prion disease
125088031
05022 Pathways of neurodegeneration - multiple diseases
125088031
09165 Substance dependence
05030 Cocaine addiction
125088031
05031 Amphetamine addiction
125088031
05033 Nicotine addiction
125088031
05034 Alcoholism
125088031
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
llv04040
]
125088031
Ion channels [BR:
llv04040
]
Ligand-gated channels
Glutamate (ionotropic)
125088031
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
NMDAR2_C
Motif
Other DBs
NCBI-GeneID:
125088031
NCBI-ProteinID:
XP_047564897
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All DBs
Position
16:6162004..6179211
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AA seq
1276 aa
AA seq
DB search
MGGALGSALLLTSLLGAWAGLGPGQGEQAVTVAVVFGSSGPPHAQVRTRLTSQSFMDLPL
EIQPLTVGVNNTNPSSLLTQICGLLGAARVHGIVFEDNVGTEAVAQILDFISSQTHVPIL
SISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLE
GVRAVADASYLSWRLLDVLTLELGPGGQRAHIQRLLRQVDAPVLVAYCSREEAEVLFAEA
AQAGLVGPGHVWLVPSLALGSTDAPPAAFPVGLISVVTESWRLSLRQKVRDGVAILALGA
HGYQRQHGALPSPAGDCRGHPGPVSPAREAFYRHLLNVTWEGRDFSFSPGGYLVQPTMVV
IALNRHRLWEMVGRWDHGVLHMKYPVWPRYSASLQPVVDSRHVTVATLEERPFVIVESPD
PGTGGCVPNTVPCRRQNNQTFRSARMCGKAAVCCRAMAAVCGLRLGEGGWGPSAKPGGAA
GSDFWWSLGGSSGDTAPYTKLCCKGFCIDILKKLAKVVKFSYDLYLVTNGKHGKRVRGVW
NGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSPSAFLEPY
SPSVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTSGKKSGGPSFTIGKSVWLLWALVF
NNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTVSGLSDKKFQRP
QDQYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKFNQRSVEDALTSLKMGKLDAFIYDAA
VLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLALLQFLGDGETQKLET
VWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVYWKLRHSVPSTP
RLDFLLAFSRGIYSCFSGVQSLASPARPPSPDLTAGSAQASVLKMLQAARDMVTTAGVSS
SLDRAARTIESWGGGRRAPPPPACPGPRPPTPGPSPEPSPTGWGPAGGGRAAPGRRAPQP
PGRPPTPRPSLPDVSRVSGWAAREARQQLPVGRGGRLLSGSERRALPERPLSPERCHYSS
FPRADRSGRPFLPLFPEPPAPEDLPLLGPEQLARREALLRAAWARGSRPRHASLPSSVAE
AFAWPRSLPVGCGHPACVHLAPAPAMRLPSYREACQEGVWARVPAWPHRQHACLHAHAHL
PLCWGAVCPPLPPCASHSPWLTGAWGPPGHRGRTLGLSTGYRDSAGLEEVSRVACGTHGF
PGPCTWRRISSLESEV
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcgctctggggtcagccctgctgctcacctcactcctcggggcctgggcaggg
ctgggcccgggtcagggtgagcaagctgtgacagtggccgtggtgtttggcagctcgggg
ccaccacacgcccaagttcgcacccgcctcacctcccagagcttcatggacctgcctctg
gagatccagccgctcaccgtgggcgtcaacaacaccaaccccagcagcctcctcacccag
atctgcgggctcctcggggcggcgcgcgtccacggcattgtctttgaggacaacgtgggc
accgaggccgtggcgcagatcctggacttcatctcctcccagacccatgtgcctatcctc
agcatcagtgggggctcggctgtggtcctcacccccaaggagccgggctccgccttcctg
cagctgggcgtgtccctggagcagcagctgcaggtgctgttcaaggtgctggaggagtac
gactggagcgcgttcgccgtgatcaccagcctgcacccggggcacgcgctcttcctggag
ggggtgcgcgccgtggccgacgccagctacctgagctggcggctgctggacgtgctcacg
ctggaactgggcccgggcgggcagcgcgcgcacatccagcgcctgctgcgccaggtcgac
gccccggtgctggtggcctactgctcgcgcgaggaggccgaggtgctcttcgccgaggcg
gcacaggccggtctggtggggcccggacacgtgtggctggtgcccagcctggcgctgggc
agcaccgacgcgccccccgccgccttccccgtgggcctcatcagcgtcgtcaccgagagc
tggcgcctcagcctccgccagaaggtccgcgacggcgtggccatcctggctctgggcgcc
cacggctaccagaggcagcatggtgccctgccatccccggctggggactgccgtggccat
cccgggcctgtcagccctgcccgggaggccttctacaggcacctactgaacgtcacctgg
gagggccgagacttctccttcagcccgggtgggtacctggtccagcccaccatggttgtg
atcgccctcaaccgccaccgcctctgggagatggtggggcgctgggaccacggcgtcctc
cacatgaagtacccagtgtggcctcgctatagcgcatctctccaacctgttgtggacagc
cggcacgtgacagtggccacgctggaagagcggccctttgtcattgtggagagccctgac
cccggcacaggcggctgtgtgcccaacaccgtgccttgccgcaggcagaacaaccaaacc
ttcaggtccgcgagaatgtgcgggaaggcagctgtgtgctgccgcgcgatggcagccgtg
tgtggtttgcgcttgggtgaggggggttgggggccatctgccaaaccgggaggagctgcg
ggctctgacttctggtggtctcttggtggcagcagcggtgacacagccccctacaccaag
ctttgctgtaagggtttctgcattgacatcctcaagaagctggccaaggtggtcaagttc
tcctatgacctgtacctggtgaccaatggcaagcatggcaagagggttcggggcgtgtgg
aacggcatgatcggggaggtgtactacaagcgggcagacatggccatcggctccctcacc
atcaacgaggagcgctccgagattgtggacttctctgtgcccttcgtggagacaggcatc
agcgtgatggtggcccgcagcaatggcaccgtctccccgtcggccttcctggagccctac
agcccttctgtgtgggtgatgatgttcgttatgtgtctcactgtggtggccatcacagtc
ttcatgtttgagtacttcagcccagtcagctacaaccagaacctcaccagtggcaagaag
tctgggggcccatccttcaccatcggcaagtctgtgtggctgctgtgggcgctggtcttc
aacaactcggtgcccatcgagaacccccgaggcaccaccagcaagatcatggtcctagtc
tgggccttctttgctgtcatcttcctcgccagctacaccgccaaccttgctgccttcatg
atccaggagcaatacattgacactgtgtccggcctcagtgataagaagtttcagcggcct
caggaccagtacccacccttccgctttggcacggtgcccaatggcagcacggagcggaac
atccgcagcaactaccgagacatgcacacccacatggtcaagttcaaccagcggtcggtg
gaagacgccctcaccagcctcaagatggggaagctggacgccttcatctacgatgccgct
gtcctcaactacatggcgggcaaggacgagggctgcaagctggtcaccattggctctggc
aaggtctttgctaccactggctacggcatcgccatgcagaaggactcccactggaaacgg
gccatagacttggcgctccttcagttcttgggggatggggagacccagaagctggagaca
gtgtggctctcagggatctgccagaacgagaagaacgaggtcatgagcagcaagctggac
atcgacaacatggctggcgtcttctacatgctgctggtggccatggggctggccctgctg
gtctttgcctgggagcacctggtctactggaaactgcgccactcagtgcccagcacgcct
cggctggacttcctgctggccttcagcaggggcatctacagctgcttcagcggggtgcag
agcctggccagccccgcgcggccccccagcccggacctgaccgccggctcggcccaggcc
agcgtgctcaagatgctgcaggcggcacgcgacatggtgaccacggcgggcgtgagcagc
tccctggaccgcgccgcgcgcaccatcgagagttggggcggcggccgccgcgcgcccccg
ccgcccgcctgccccggcccgcggccgcccacccccggcccgtcccctgagcccagcccc
acgggctggggaccggcaggcgggggccgcgccgcgccggggcgcagagccccgcagccc
ccgggccgccccccgacgcccaggccgtcgctgcccgacgtctcccgggtgtcgggctgg
gccgctcgggaggcgcggcagcagttgccggtcgggcgcggcgggcggctcctctcgggc
tccgagcggcgcgcgctcccagagcgccccctgtccccggaacgctgccactacagctcc
ttccctcgagccgaccggtccgggcgccccttcctcccgctcttcccggagcccccggcg
ccagaggacctgccgctactcgggccggagcagctggctcggcgggaggccctgttgcgc
gcggcctgggcccggggctcacgcccgcgccacgcttccctgcccagctcggtggccgag
gccttcgcctggcccaggtctctgcccgtggggtgcggccacccggcctgtgtgcacttg
gcgccggcgccggcgatgaggctgccgtcctaccgggaggcctgccaggagggcgtgtgg
gccagggtccccgcctggccgcacagacagcacgcctgcctgcacgcccacgcccacctg
ccgctttgctggggggctgtgtgcccccctctgccaccctgtgccagccacagcccctgg
ctcactggggcctgggggcctccggggcacaggggcaggaccctggggctgagcacaggc
tacagggacagtgcggggctggaagaggtcagcagggtggcctgtgggacacacggcttc
cctggaccttgtacctggaggcggatctccagcttagagtcagaagtgtga
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