Lutra lutra (Eurasian river otter): 125090578
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Entry
125090578 CDS
T08100
Name
(RefSeq) MHC class II transactivator-like isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04612
Antigen processing and presentation
llv05145
Toxoplasmosis
llv05152
Tuberculosis
llv05164
Influenza A
llv05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
125090578
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
125090578
09171 Infectious disease: bacterial
05152 Tuberculosis
125090578
09174 Infectious disease: parasitic
05145 Toxoplasmosis
125090578
09163 Immune disease
05340 Primary immunodeficiency
125090578
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
llv01001
]
125090578
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
llv04054
]
125090578
Enzymes [BR:
llv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
125090578
Protein kinases [BR:
llv01001
]
Serine/threonine kinases: Other
TAF1 family
125090578
Pattern recognition receptors [BR:
llv04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
125090578
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_8
LRR_9
Motif
Other DBs
NCBI-GeneID:
125090578
NCBI-ProteinID:
XP_047569324
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All DBs
Position
18:8661725..8708043
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AA seq
1207 aa
AA seq
DB search
MNHFQSILTRVQMLLSGRRPSQVQALLDHMLEKELLSREYHCALLLEPDGEALARKISLT
LLERGDPDLALLRWAWSGWQLPVAERDPGSKDHGGSGQCAAMELGPLEGGYLELLNSSAD
PLQLYNLYDQTDLAREELELCSEPDMDTINCEQFSKLLCDIEGDEETREAYANIAELDQY
VFQDSQLDGLGKDIFIEHIGLEEMISENVEVLEEAGQKSQKRPFPEELPVDLKHRKLAEP
VTVPMVTGTFLVGPVSDSSALPCLSPPAVFNKEPESSQRWLEETILMPVPPSSLLGCLSL
PAGPIQIVPSLPSLPQGLWQISGPGTGVSSMVIYQGKMPQASQVLPSNGPAVQSLPKSPD
RPGSTSPFAPSATDLPGMPEPALTSRANTTEDQMSPTQCLEAHEVSSKPPKWPESVEQFC
RSLRDKYRAEPADPEGILVEVELVRARLERSGDKSQERELATPDWAERQLARGGLAEVLL
AAGDRRRPRETQVIAVLGKAGQGKSRWAREVSRAWACGQLPQYDFVFYFPCHCLDRAGDS
YRLQDLLFCLGPQPQPADEVFSYVLRRPDRVLLILDAFEGLEGQDGLLHSAGGPVSTEPH
SFRGLLAGLFQRKLLRGCTVLLTARPRGRLAQSLSKADVLFEVTGFSAEQAETYVTSYLE
RAGVPERRERALALLRGRPFLFSLSHSPTVCRAVCQLSEALLELGGEAELPSTLTGLYVG
LLSPAARDSPPGALAGLARLAWELGRRHRGTLRDSQFPSAEVRAWAVAQGLVQPVPGAPD
AELAFSSFLLQCFLGAVWLALSTEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLLF
QPHADGLGALAGPAGAAVGARKQKALSKYLKRLQPGTLRAGRLLELLHCAHEAADAGLWQ
YVVQGLPARLSFLGTRLTPPNAYVLHSALEAAGRDFSLDLRSTGIDPAGLGSLVGLSCVT
HFRASLSDTVGLWESLQQRGETELLRAVEEKFTIEPFKAKSPKDVEDLGNLVQIQRTRSS
SEDTAGELPAVRDLKKLEFALGSVSGPQAFPKLVRILEAFSSLQHLDLDSLSENKIGDEG
VEQLSATFPRLKALETLNLSQNSITDVGACKLAEALPSLASSLLRLSVYNNSICDVGAES
LANVLPDMVSLRVLDVQYNKFTAAGAQQLAASLRKCPHVETLAMWTPTIPFGVHEHLQQL
DSRISLR
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttccagagcatcctgacgcgggtccagatgctgctgtccggccgtcggccg
agtcaggtgcaggccctcctggaccacatgctggagaaggagctcctgtcccgggagtac
cactgtgccctgctcctcgagccagatggcgaggccctggccaggaagatctccttgacc
ctgctggagagaggagacccagacttggccctcttgaggtgggcgtggagtgggtggcag
ctcccggtggccgagagggaccctggctccaaggaccatggtggcagtgggcagtgtgct
gccatggagctggggcctctagaaggcgggtacctggagcttctcaacagcagtgctgat
cccttgcagctctacaacctctatgaccagacggacctggctagagaagagcttgagctc
tgctcagaacccgacatggacaccatcaactgcgaacagttcagcaaactgttgtgtgac
atcgaaggtgatgaagagaccagggaggcttatgccaatatcgcggaactggaccagtat
gtgtttcaggactcccagctggatggtctgggcaaagacattttcatcgagcacatagga
ttggaagaaatgatcagcgagaatgtggaggtgttggaggaagcagggcagaaaagtcag
aaaagacccttcccagaggagctgcccgtggacttgaagcacaggaagctagctgagccc
gtcactgtgcccatggtgactggcacgttcctggtggggccagtgagcgactcctcggca
ctgccctgcctgtcacctcctgctgtgttcaacaaggagccagaatccagccagcgttgg
ctggaggagaccatcctgatgcctgttcctcccagttccttgctgggctgcctcagcctt
cctgctggacccattcagattgtccccagcctcccctctctgccccaggggctctggcag
atctcagggcctgggacaggggtgtccagtatggtcatctatcaaggcaagatgccccag
gccagccaagtgcttccttctaatggcccagctgtgcagagcctccccaagtccccagat
cggcctggctctaccagcccctttgctccgtctgcaactgaccttcctggcatgccagaa
ccagccttgacctcccgtgcaaatacaacagaggaccagatgtcccctacccagtgcctg
gaagctcatgaagtctccagcaagcctccaaaatggcctgagagcgtggagcagttctgc
cgttccctccgggacaagtaccgggccgagcccgcagacccggaaggcatcctggtggag
gtggagctggtgagggcgcggctggagaggagcggcgacaagagccaggagcgggagctg
gccaccccggactgggcagagcggcagctggcccgcgggggtctggccgaggtgctgctg
gctgccggggaccgccggcgaccgcgggagacgcaggtgatcgccgtgctgggtaaagca
ggacaggggaagagccgctgggcccgggaagtgagccgcgcctgggcctgcggccagctg
ccccagtacgacttcgtcttctacttcccctgccactgtctggaccgcgcgggggacagt
taccgcctgcaggatctgctcttctgcctgggcccccagccacagcccgcggacgaggtc
ttcagctatgtcttgaggaggcccgaccgggttctgctcatcctggacgccttcgagggt
ctcgaaggccaagacggcctcctgcacagcgcaggcggacctgtgtccacagagccgcac
tccttccgggggctgctggctgggctcttccagaggaagctgctgcgaggctgcactgtg
ctgctcacggcccggccccggggccgcctggcccagagcctcagcaaggccgatgtcctg
ttcgaggtgaccggcttctccgccgagcaggcggagacctacgtgaccagctacctggag
cgcgctggggtccccgagcgccgagaacgagccctggcgctcctccgtggccggcccttc
ctgttcagcctcagccacagtcccacagtgtgccgggccgtgtgccagctctccgaggcc
ctcctggagctgggcggcgaggctgagctgccctccacgctcacgggactctacgtgggg
ctgctgagccctgcggcccgcgacagccccccgggggccctggcgggactggccaggctg
gcctgggagctgggccgaagacaccgtggcaccctgcgggacagccagttcccgtccgcg
gaggtgagggcctgggccgtggcccaaggcctggtgcagcccgtcccgggggccccggac
gcggagctggccttctccagcttcctcctgcagtgcttcctgggggccgtgtggctggct
ctgagcaccgagatcaaggacaaggagctgccacagtacttggccttgaccccgaggaag
aagaggccgtatgacaactggctggagggcgtgccgcgcttcctggctgggctgcttttc
cagcctcacgccgatggcctcggagccctggcgggaccggcgggggccgcggtgggggcc
aggaagcagaaggcgctcagcaagtacctgaagcggctgcagccggggacgctccgggct
gggcggctgctggagctgctgcactgtgcccacgaggctgcggacgccgggctctggcag
tacgtggtgcaggggctcccggcccgcctctccttcctgggcacccggctcacaccgccc
aacgcctatgtgctgcacagcgccttggaggcggccggccgagacttctccctggacctc
cgcagcactggcatcgaccccgctgggctggggagcctcgtgggactcagctgtgtcacc
catttcagggcttcgctgagtgacacggtgggcctgtgggagtctctacagcagcgtggg
gagaccgagctgctccgggcagtggaggagaagttcaccatcgagcctttcaaggccaaa
tccccaaaggatgtggaagacttgggcaacctcgtgcagatccagaggacaaggagttcc
tcggaagacacagctggagagctccctgccgtccgggacctgaagaagctggagtttgcg
ctgggctccgtctcaggcccccaggcttttcccaaactggtgaggatcctcgaggcgttt
tcctcccttcagcatctggacctggactcgctgagcgagaacaagatcggggatgagggt
gtcgagcagctgtcagccaccttccctcggctgaaggccctggagactctcaacttgtcc
cagaacagcatcactgacgtgggtgcctgcaagctcgccgaggccttgccctccctggct
tcatccctcctcaggctgagcgtgtacaataacagcatctgtgatgtgggagcggagagc
ctggcaaacgtgcttccagacatggtgtccctccgggtgttggatgtccagtataacaag
ttcacggccgccggggcccagcagctcgccgccagcctgagaaagtgccctcacgtggag
acactggcgatgtggacgcccaccatcccgtttggtgtccatgaacacctacagcagctg
gactcaaggatcagcctcagatga
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