Lutra lutra (Eurasian river otter): 125098555
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Entry
125098555 CDS
T08100
Name
(RefSeq) vascular cell adhesion protein 1 isoform X1
KO
K06527
vascular cell adhesion molecule 1
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv04064
NF-kappa B signaling pathway
llv04514
Cell adhesion molecules
llv04668
TNF signaling pathway
llv04670
Leukocyte transendothelial migration
llv04933
AGE-RAGE signaling pathway in diabetic complications
llv05143
African trypanosomiasis
llv05144
Malaria
llv05417
Lipid and atherosclerosis
llv05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
125098555
04668 TNF signaling pathway
125098555
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
125098555
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
125098555
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
125098555
05143 African trypanosomiasis
125098555
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
125098555
05418 Fluid shear stress and atherosclerosis
125098555
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
125098555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
llv04090
]
125098555
04091 Lectins [BR:
llv04091
]
125098555
CD molecules [BR:
llv04090
]
Proteins
125098555
Lectins [BR:
llv04091
]
I-type lectins (Siglecs)
125098555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
C2-set
Ig_2
V-set
C2-set_2
ICAM_N
Ig_4
Ig_6
ICAM1_3_5_D2
Ig_5
C1-set
Adhes-Ig_like
Motif
Other DBs
NCBI-GeneID:
125098555
NCBI-ProteinID:
XP_047583431
LinkDB
All DBs
Position
4:complement(111051560..111069837)
Genome browser
AA seq
748 aa
AA seq
DB search
MFSSQQKLKMPRKMVVIFGVSNVLWMVFAVSQAFKMEISPEHRVIAQIGDVISLTCSTTG
CEPPSFSWRTQIDSPLNGKVRNEGNSSTLTMDPVSFNNEHAYVCTATCGSKKLEKGIQVE
IYSFPKDPEIHLSGPLELGKPVTVTCMVPDVYPFDRLEVNLMKDNELLKNKEFLEPMERK
SLETKSLAATFIPTNEDIGKALVCQAKLNIDEFDFEPKERETTKKLQVYISPKNTVISVS
PSTKLQEGGSVTMTCSSEGLPAPQIFWSKKLDNGNVQLLSGNATLTLIAMRIEDSGIYVC
EGVNQVGKDGKEVELIVQEKPFIVEISPGPQVIAQIGDSVVLTCGVTGCESPSFSWRTQI
DSPLSGQVKTEGSKSTLTLSPVSFENEHSYLCTVTCGRKKLEKRISVDLYSFPRDPEIEM
SGLLVSGNPVTVSCEVPNVYPSDRLEIELFKGESIIESKTFLEDMDKKSLETKTLDMTFI
PTTEDTGKVLVCLAQLHIGEMEFEPKQRQSTQMLHVNVAPRDTTILVSPSSILEEGSSVN
MTCSSNGLPAPKILWSRQLNNGDLQPLSENSTLTLTSTKMDDSGIYVCEGINQAGISRKE
VELIIQVAPKDIQLIAFPSESVKEGDTVIISCTCGNVPKTWIILKKKAETGDTVLKSRDG
AYTIHKVQLEDAGVYECESKNEAGLQLRSLTLDVKGRENNKDYFSPELLVLYCASSLIIP
AIGMIIYFARRANMKGSYSLVEAQKSKV
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgttctcatcacaacagaaactaaaaatgcctaggaagatggtcgtgatctttggagtc
tcaaatgttctttggatggtgtttgctgtttctcaagcttttaaaatggaaatctcccct
gaacacagagttattgctcagattggtgatgtcatttcactgacttgcagtacaacaggc
tgtgagcccccatctttctcctggagaacccagatagacagtccgctgaatgggaaggtg
agaaatgaggggaacagctccacgttgaccatggatcctgttagtttcaacaatgaacat
gcttacgtgtgcacagcaacttgtggatctaagaaactggaaaaaggaattcaggtggag
atttattctttccctaaggacccagagatccatctgagtggccccctagaacttgggaag
ccagtcacagtcacgtgtatggtccctgatgtttacccatttgataggctggaggtaaat
ttgatgaaggacaatgagctcttaaagaataaggaattcctagagcctatggaaaggaag
tccctggagaccaagagtttggcagcaaccttcattcctaccaatgaggatattgggaaa
gctcttgtttgccaagcgaaattaaacattgatgaatttgactttgagcccaaagaaagg
gagactacaaaaaaactgcaagtctacatctcacccaagaacacagttatctctgtgagt
ccctccacgaagctgcaagaaggtggttctgtgacaatgacatgttccagtgagggtctt
ccagccccacagattttctggagcaaaaaattagataatgggaatgtacagctcctttcc
gggaacgcaactctgactttaattgctatgaggatagaagattctggaatttatgtgtgt
gaaggagtcaatcaggtcgggaaagatggaaaagaggtggaattaattgttcaagagaaa
ccattcattgttgagatctcccccggaccccaagttattgctcagattggagactcagtt
gtgttgacgtgtggtgtcacaggctgcgagtccccatctttctcttggagaacgcagata
gacagccctctgagtgggcaggtgaagactgaagggagcaagtccacactgacactgagc
cctgtgagttttgagaacgaacattcttacctgtgcactgtgacctgtggccggaagaaa
ctggaaaagagaattagtgtggacctctactcattccctagagatccagagattgagatg
agtggtctactagtgagtggaaacccagtcactgtgagctgtgaggttcctaatgtgtat
ccttctgaccggctggagattgaattatttaagggggagagtatcatagagagtaaaacc
tttctggaggacatggacaagaaatctctggagactaagactttggatatgaccttcatc
cccaccactgaagataccggaaaagttcttgtttgtctggctcagttacacattggtgaa
atggaatttgaacccaaacaaaggcagagtacacagatgcttcatgttaacgttgccccc
agggatacaaccatcttggtcagcccctcctccatcctggaggaaggtagttctgtaaat
atgacgtgctctagcaatggcctcccagctccgaaaatcctgtggagcaggcagctaaat
aatggggatctacagcctctttctgagaattcaactctcaccttaacttctaccaaaatg
gacgattctggtatttatgtgtgtgaagggattaaccaggcaggcataagcagaaaagaa
gtcgaattaattatccaagttgctccgaaagacatacaacttatagcttttccttctgag
agtgtcaaggaaggagacactgtcattatctcctgtacatgtggaaacgttccaaaaact
tggataatcctgaagaaaaaagcagagacgggagacacagtgctaaagtcgagagatggt
gcatataccatccacaaggtccagttagaggatgcgggagtgtacgaatgtgaatctaaa
aatgaggctggcttgcaattaagaagtttaaccctcgatgttaaaggaagagaaaataac
aaggattatttttctcctgaacttcttgtgctctattgtgcatcttccttaataataccg
gccattggaatgatcatctactttgctagaagagctaacatgaaggggtcatatagtctc
gtagaggcacagaaatcaaaagtgtag
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