Lutra lutra (Eurasian river otter): 125108703
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Entry
125108703 CDS
T08100
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
llv
Lutra lutra (Eurasian river otter)
Pathway
llv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
llv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125108703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
llv03021
]
125108703
Enzymes [BR:
llv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125108703
Transcription machinery [BR:
llv03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
125108703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
125108703
NCBI-ProteinID:
XP_047600846
LinkDB
All DBs
Position
9:37625690..37653706
Genome browser
AA seq
1141 aa
AA seq
DB search
MDPGGRMDPAGRWQNLPSGPSLKHLTDPSYGIPREQQKPALQELTRAHVESFNYAVREGL
SHAVQAIPPFEFAFKDERISLTIVDAVISPPMVPKGNICKELNIYPAECRGRRSTYRGKL
TADISWAVNGISRGIIKQFLGYVPIMVKSKLCNLHGLSPKALIEHHEEAEEMGGYFIING
IEKVIRMLIMPRRNFPIAMIRPKWKTRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTV
MLNFIYRKELFFLPLGFALKALVSFSDYQIFQELMKGKEEDSFFRNSVSQMLRIVMEEGC
STQKQVLNYLGERFRVKLSLPDWCPNEQAAEFLFNQCVCIHLKSNTEKFYMLCLMTRKLF
ALAKGECMEDNPDSLVNQEVLTPGQLFLMFLKEKMESWLVSIKIALDKRAQKTNVSINTE
NLMKIFNLGTDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFVRYLSHFRCVHR
GADFAKMRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASVPALL
CSLGVTPVDGTPHRSYSECYPVLLDGVVLGWVAKELAPSIADSLRHFKVLREKRIPPWME
VALIPMTGKPSLYPGLFLFTTPCRLVRPVQNLELGKEELIGTMEQIFMNIAIFEDEVLAG
VTTHQELFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQARSDNKLYRL
QTPQSPLVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVY
KSEFIDLSEKIKQGDDSLVFGVKPGDPRILQKLDDDGLPFIGAQLQYGDPYYGYLNLNTG
ESFVMYYKSKENCIVDNIKVCSNDTGSGKFKCICITMRVPRNPTIGDKFASRHGQKGILS
RLWPVEDMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSE
ENSALEYFGELLKAGGYNFYGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRT
TGARDKVTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCG
SLLSPLLEKPPPSWSATRNRKYNCTLCDRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDV
I
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atggatccaggcggacgcatggatccagccggccggtggcagaatctgcccagcgggcct
agcctaaagcacttaactgacccgtcttatgggatcccgcgggagcagcaaaagccagcg
ttgcaggaactgacgcgggcgcatgttgagtccttcaactacgctgtgcgcgaggggctc
agccacgcggtgcaggctatccctccctttgaattcgctttcaaagatgagcgcatctcc
cttactattgtggacgctgtcatcagcccgcctatggttcccaaagggaacatctgcaaa
gagctcaacatttatccagccgaatgccggggccggaggagcacctaccggggcaagctg
acggctgatatcagctgggcagtgaatggaatctcaagaggaatcattaaacagtttctt
ggctacgttcccatcatggtgaagtctaagctttgcaacttacacggcctttctcccaaa
gccctcattgagcaccatgaggaagcagaggaaatgggaggctattttataataaatggc
attgaaaaagtcatccgaatgttgattatgcctcggaggaatttccccattgcaatgata
agaccaaaatggaaaaccagagggcctggctatactcagtatggagtctcaatgcactgt
gtgagggaggaacattctgcagtcaatatgaaccttcactacttggaaaatggcacggtt
atgttgaactttatttatcggaaagaactattttttcttcctttgggatttgcacttaag
gcacttgtcagcttctccgattatcagatttttcaggagctcatgaaaggcaaagaggag
gactctttctttaggaactccgtttctcagatgttaaggatcgtcatggaagagggttgt
tccacacaaaagcaagttcttaactatctaggtgaacgcttcagagtcaagctcagtctt
cctgactggtgtccaaatgaacaagctgcagagtttctgtttaaccagtgcgtctgtatc
cacctgaaatccaatacggaaaagttttatatgctttgtctcatgacccggaagctcttt
gcattagccaaaggagagtgcatggaggacaatccggatagtctagtgaatcaggaagtc
ctgacgcccggtcagctcttcctcatgtttctgaaggaaaaaatggaatcttggttagta
tctattaaaatagctctagacaagagggctcagaagacgaatgtgtccataaacactgaa
aatttgatgaagatttttaatctgggaacagaccttacaaagccatttgagtatcttctt
gctactggaaatctgcgttctaaaacaggtcttggcttcctacaagattctggcctttgt
gttgtggctgacaagttgaacttcgtacgctatctctcccatttccgctgtgtgcacaga
ggggccgattttgccaagatgagaaccaccacggtacgcaggttgctgcctgagtcctgg
ggcttcctgtgtcccgtgcacaccccagacggggagccctgcggcctcatgaaccacttg
actgctgtgtgcgaggtcgtcacacagtttgtgtacacggcgtctgttcccgctctgctg
tgcagcttgggggtcactccagttgacggaactccacaccgatcatacagcgagtgctac
cctgtcctgctggatggcgtcgtgctcggctgggtggctaaggaacttgctcctagcatt
gcagattcgctccgacattttaaggtgttgagagaaaaaagaattcctccctggatggaa
gtggcccttatccccatgacaggaaaaccaagtctgtacccaggattgttcctgtttacc
actccttgtagactggtgcgtcccgtgcagaacttggaattaggcaaagaagaactaatt
ggaactatggagcagatcttcatgaacattgccatctttgaggatgaggttttggctgga
gttaccactcaccaggaactcttcccccacagcctgctgagtgtgatcgccaacttcatc
cctttctccgatcacaaccagagtccccggaacatgtaccagtgccagatggggaagcaa
accatgggctttccacttctcacttaccaagctcgatcagataataaactgtatcgtctt
cagactccacaaagccctttagtgagaccatacatgtatgattattatgacatggataac
tatccaattgggacaaatgccatcgttgctgttatttcttacactggctacgatatggaa
gatgccatgatcgtgaataaggcctcctgggaacgaggctttgcccatggaagtgtctac
aagtctgagttcatagatctatctgagaaaattaaacaaggagatgatagtctggtgttt
ggagtcaaacctggtgacccgcggattctgcagaagttagacgacgatggcttgccattc
atcggagcccagctacagtatggagacccgtattatggctacctgaacctcaacaccggg
gaaagctttgtgatgtactataagagtaaagaaaattgcatcgtggataacatcaaagtg
tgtagtaatgacaccggcagtgggaagttcaagtgtatctgcatcacgatgagagtccct
cggaacccgaccatcggagacaaatttgccagtcgccacgggcagaagggcatcctgagc
aggctgtggccagtagaggacatgccattcaccgagagcgggatggtcccagacattctg
ttcaatcctcacggttttccctcccgcatgaccatcgggatgttaattgaaagtatggca
gggaagtccgctgccctgcacggtctctgccacgatgcgacacccttcaccttttcagag
gagaactcggccttggagtacttcggggagctgttaaaagccggtggctacaacttctat
ggcaccgagaggttgtacagcggcatcagtgggctggaactggaagcagacattttcata
ggtgtggtttattaccaacgtttgcgccacatggtctcagacaagttccaggttaggacc
acgggcgccagagacaaagtcaccaaccagcctattgggggaaggaatgtccagggcgga
atccgttttggggaaatggagagggacgctcttttagctcatggtacatcttttctcctg
catgaccgcctcttcaactgttcggatcgctcggtagcacacgtgtgcgttaagtgtggc
agtttactgtctccgctgctggagaagccacccccttcctggtccgccacgcgcaacaga
aaatacaactgtacattgtgtgatcgaagcgacaccatcgacactgtttccgtgccttac
gttttccggtattttgtagctgaactggcagccatgaacattaaggtgaaactggatgtc
atttaa
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integrated database retrieval system
