Leishmania major: LMJF_30_2410
Help
Entry
LMJF_30_2410 CDS
T01014
Name
(RefSeq) pre-mRNA cleavage complex II Clp1-like protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
lma
Leishmania major
Pathway
lma03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lma00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LMJF_30_2410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lma03019
]
LMJF_30_2410
Enzymes [BR:
lma01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
LMJF_30_2410
Messenger RNA biogenesis [BR:
lma03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
LMJF_30_2410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
Clp1
VMAP-M8
CLP1_N
Motif
Other DBs
NCBI-GeneID:
5653786
NCBI-ProteinID:
XP_001684846
UniProt:
Q4Q752
LinkDB
All DBs
Position
30:complement(932852..934129)
Genome browser
AA seq
425 aa
AA seq
DB search
MQPRKTHTSLHLSQEAVTIQWNAMQEGGSVLLLSGKVELFRSSLTRNLRYAFPAGACIVL
EAFGDAVVQIDGDAITLQTLISSALDEIHALLDTARVDAMLAIEERSKKALSSSEELKDS
WQGPRVLVVGENQWEREAVSRALLNLAVRHGSPYGICYVDLDVAMPMVGCPGTVSAAFVE
EPVTAPEDFGVMMPLTFFHGTASVTSATRKRYLDLCVCAAQAATSLGFANSKFEAGGFLI
HSLSPSTEIQHDVLSDVLSIFAVTHVVVTGADRELEKFLYNAVLGRTVHFVRLPKLAGVQ
SPSSAGAEQRRRAQLERYFFGTPRTPLVPVRGVARMSELVLLHAETFEPLSWREVPDLGL
AAVVWADTAASAAEANVAGFVALLEVGKQFVSFLAPSGGELPKPFLVVSPSLHLPRELVM
PLPVT
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccacgtaagacgcacacctcgcttcatctcagccaggaggcggttacgatacaa
tggaatgcgatgcaggaaggcggctctgttctgcttctcagtggaaaagtagagctgttt
cgtagttcactgacgcgcaacttgcggtacgcctttccagcgggggcgtgcattgtgctg
gaggcctttggtgacgccgttgtgcagatcgacggagacgcgatcaccctgcagaccctc
ataagcagtgccctagatgagatccacgcgctgctcgacactgcgcgcgtggatgcaatg
ctggccattgaagagcgcagcaagaaagccttgtccagctccgaggagctcaaagactct
tggcagggccctcgtgtgcttgttgtcggcgagaaccagtgggagagggaggcggtgtcg
cgagcactgctcaacctcgcagttcgccacggtagcccgtacggcatctgctacgtggac
ttggatgtggcgatgcctatggtgggctgtccaggtacggtgtcggctgcgtttgtggag
gaaccggtgacagcaccggaggactttggtgtgatgatgccgctgacgtttttccacggc
acggcctctgtcacgagtgcgacgcggaagcgctacttggatctgtgcgtctgtgcggcg
caagcggctacctcactcgggttcgccaactcgaagtttgaggcgggtggcttcttgatc
cactccttgtccccttccaccgagattcagcacgacgtgctgagcgacgtcctctccatt
ttcgccgtcacgcacgtcgtcgtcactggcgcagatcgggagctggaaaaatttctgtac
aacgctgtcttgggccgcacagtgcactttgtgcggctgccgaagctggcaggtgtgcag
tcgcccagctccgccggggcggagcagcgtcggcgcgcgcagttggagcgctactttttt
ggcaccccacgtactcctctggtgccggtgcgtggtgtggcacgaatgtcggagttggtg
ctcctccacgcggagacattcgagccgctgagctggagagaggtgccggacctgggtctt
gccgcggttgtctgggccgacacggctgcgtctgctgcggaggcgaacgtcgcagggttt
gttgccttgctggaggtgggaaagcagtttgtcagcttcctcgctccatccggtggagag
ctgcccaagccgtttttggtggtctcgccgtccctgcacctgccacgggaactggtgatg
cccctgccagtaacgtag
DBGET
integrated database retrieval system
