Lysinibacillus macroides: I6G82_15720
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Entry
I6G82_15720 CDS
T08056
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lmac
Lysinibacillus macroides
Pathway
lmac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I6G82_15720 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmac03021
]
I6G82_15720 (rpoE)
03400 DNA repair and recombination proteins [BR:
lmac03400
]
I6G82_15720 (rpoE)
Transcription machinery [BR:
lmac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I6G82_15720 (rpoE)
DNA repair and recombination proteins [BR:
lmac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I6G82_15720 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
TPR_20
SAM_KSR1
Motif
Other DBs
NCBI-ProteinID:
QPR66721
LinkDB
All DBs
Position
complement(3159272..3159811)
Genome browser
AA seq
179 aa
AA seq
DB search
MNFREMTKEQLAEESLINLAYAILNEKHTPIAFNDLLKIIQELVGYNDEAIKSRLLQFYT
DINIDGRFLFNQETGWGLREWFKVEQIEEETAPSVKTQKKKSKAVLDEDDDLVEDIDLDE
EDIDFEEDFEEFVEEDELDEDDDKEDIEFDDDDLEDIDEEIDEEFIDEDEEFEEEEEEL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
ttgaattttcgtgaaatgacaaaggaacaattagcggaagagtcgttaattaacttagcg
tatgcaattttaaatgaaaagcataccccaatagcttttaatgatttactgaaaatcatt
caagagcttgtgggctataatgatgaagctataaaatctcgcctactgcaattttacaca
gatatcaatatagatggtcgttttttatttaatcaagaaacaggctggggcttacgcgaa
tggtttaaagtagagcaaatcgaggaagaaacagcaccttctgtgaagacccaaaagaaa
aaatcaaaagctgttctcgatgaagatgatgatcttgtggaagatatcgatttggatgaa
gaagatattgactttgaagaggactttgaagagttcgtggaagaagatgagcttgatgaa
gatgatgataaagaagatatcgaatttgatgatgatgacttagaggacattgatgaagaa
atcgatgaagaatttattgatgaagacgaagagtttgaggaagaagaggaagaactctaa
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integrated database retrieval system
