Listeria monocytogenes CLIP 80459 (serotype 4b): Lm4b_00855
Help
Entry
Lm4b_00855 CDS
T00898
Name
(GenBank) Putative Tetracycline resistance protein
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
lmc
Listeria monocytogenes CLIP 80459 (serotype 4b)
Brite
KEGG Orthology (KO) [BR:
lmc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lmc02000
]
Lm4b_00855
01504 Antimicrobial resistance genes [BR:
lmc01504
]
Lm4b_00855
Transporters [BR:
lmc02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
Lm4b_00855
Antimicrobial resistance genes [BR:
lmc01504
]
Gene variants
Tetracycline resistance genes
Transporters
Lm4b_00855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
PUCC
MFS_3
TRI12
Motif
Other DBs
NCBI-ProteinID:
CAS04623
LinkDB
All DBs
Position
complement(871020..872231)
Genome browser
AA seq
403 aa
AA seq
DB search
MSSTKSIINKKTLLFGLISVFLCGMGFSIIMPVVPFLVTPYVTNASDQALMVTLLTSVYA
LCVFFAAPGLGALSDRFGRRPVLLICFIGSAIGYFIFGLGGALWVLFLGRIIEGITGGSI
STLFAFFADITPQKERTKYFGWVSAAAGAGAALGPAFGGLLAHFGYAMPFFFGAAITFIN
FLFGYFYMPESLEEANRLKRIPLMRLNPFSQLLNILTIKNLGRLLIAAFFIWVPNGSLQA
VMSQFAIDSFSWKPALIGMMFSIMGIQDILSQAFVMPKLLLKLTDKQIAILGMIAEIIGY
LLIAASSIFTLAPLLVIGMFVFGFGDSIFGPSFNGMVSKSASASEQGRIQGGSQAIQSVA
RIIGPVIGGQLYITLGHAAPAIMGVLLITVAIFILYKKTSLAK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaactaaatctattattaataagaaaactttacttttcggtcttatatctgtc
ttcctttgtgggatgggttttagtattattatgcccgttgtcccgtttctcgtaacacct
tacgtaacaaatgctagtgatcaagcgcttatggtgacactgctcacatctgtttatgcg
ctttgcgtgttctttgctgcgcctggtcttggtgctttaagtgacagatttggcagacga
ccagtgttactcatttgttttatcggctctgcgattggttactttattttcggtcttggt
ggggcgctttgggtgctctttcttgggcgaattattgaaggaatcactggtggtagcata
agtacactatttgctttctttgctgatattacgcctcaaaaggagcggacgaaatacttt
ggttgggttagcgctgcagctggtgcgggtgctgcgcttggtccggctttcggtggattg
cttgcccactttggttacgcaatgccatttttctttggagcagcgattactttcatcaac
tttttattcggttatttctacatgcctgagagtttagaagaagcaaatcgtttaaaacga
attccgcttatgcgactcaatccgttttcccagctgcttaatattctgaccatcaaaaac
ttaggacgtttactgattgctgcatttttcatttgggttcctaatggttccttgcaagct
gtcatgtctcaattcgccattgatagtttcagttggaagccagctttaattgggatgatg
ttttccattatgggaattcaagatatcttgtcgcaagcttttgttatgccaaaattacta
ctcaagttaacggacaaacaaatagctattttggggatgattgctgagattattggctat
ttgcttattgcagcttcctcgattttcacacttgcgccgctactcgttatcggaatgttc
gttttcggttttggcgactcgattttcggaccttcgtttaacggcatggtttcaaaatct
gctagcgctagcgaacaaggtcggattcaaggaggtagccaagccattcagtcggtggcg
cgtattatcggacccgttatcggtgggcaactttatattacgcttggccatgccgctcca
gctattatgggtgtccttttaatcactgttgcaatttttattctttataaaaagacttct
ttagcaaaataa
DBGET
integrated database retrieval system
