Leishmania mexicana: LMXM_16_1350
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Entry
LMXM_16_1350 CDS
T02288
Name
(RefSeq) DNA-directed rna polymerase I largest subunit,putative
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
lmi
Leishmania mexicana
Pathway
lmi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LMXM_16_1350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmi03021
]
LMXM_16_1350
Enzymes [BR:
lmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LMXM_16_1350
Transcription machinery [BR:
lmi03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
LMXM_16_1350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_1
Motif
Other DBs
NCBI-GeneID:
13450156
NCBI-ProteinID:
XP_003873823
UniProt:
E9AQU6
LinkDB
All DBs
Position
16:complement(539049..544481)
Genome browser
AA seq
1810 aa
AA seq
DB search
MSLTTAFPFHAYVGDLRTRTVHERKSGVSLSLMTSEDMARLAFVEVRVRCGQEDRLAPWT
PAVRRDGTHATFYDTRMGNFDARTFPPQACSTCCNTLNSKYGNERCQGHYGYISMPRRYP
NDPNRSQERLSVINPHLAQEVEQLLQAECFFCHRFRVPEFDVMRYQQALRLVDSGLIGEA
LRFLDMVANAHGQDMRSRRRRDANETVINDIPLMLDHVDTLLRRRGAGAPPLPRVASGEA
GAHGDVNGDAGAAGALAHADGSDDGFHKPVLDVRNEICKQALRSFREFGNVCSHCQGISP
RITTKNGHLFFFFNKKNADFNVANGGLTTAQLREWEEMNYRQGRSHTYFRTSWVREHIKQ
LCQRESAILAALFSHLGEATLHMPYACSLPSTYYYKVFFVDKLLVPPLPLRLSSGVQISE
SGGIIPDAGTRALSDVLEFVEQIEAYYVLANHSTPERNLVSTAQEIAQEHNLRNLQAKVT
EVYTDVLESFAKKEGLFRMHMMGKRVNQACRSVISPDYLVEPNEVLLPRPFARALTFPEL
VSSYSPARMMFLKRCVMNGPDVYPGATHLEIGLPSGETRFVDLHVPELIRRQHAMKYFAM
AQNGSLTVHRHILDGDHLIFNRQPTLHKVSMMAYRAKVLSGLKTLRFHYVNGSSYNADFD
GDEMNIHVVQSLEAKAELECLMDANLNYLVPTSGKPIRGFIQDHVVAGVLLTLRDNFLPH
HTFVQFVYNGIAPYMHKHGKPLSAHATLTELIPMPAVLKPRPLWTGKQLISVIVHYVTGV
VESRGGAPKSNGVSMHGTSLIQPSTYTTTDPHTGELVAASRKCMEDDHVQFFESELITGI
LCKNQLGSSNLSVVHVIHEIYGPHMVGELFGALGRVLSMSLQREGFSIGMDDMMLLQEER
RTALLRELDSAPLSLPDDEATVMPVIMGMATSLQKEFVPGRMLRPFPHNQLLTMTMSGAK
GSNTNTIQMSLGLGQQLFDGRRVKRMNSGKTLPPFFVAETRARSLGYAIGRFTSGIRPAE
YTFHAMAGRDGLIDTAVKTSRSGHLQRCLVKGLESLVVQWDHSVRDANGSVIQFLYGGDG
LDPMRTSSLQAWEVVKDNCVDLGRKMNVNTGVMTGEEEAEEAASRNSQGKRERPHEAAAA
MRAAQRALLEAEAQRDPLPAHYKASLDTYLETKAQYPLFKKVSQVARWAKNGVLNEKLRE
KREESIRYYRDVMTELTTRRRVRAYCDAGEPVGLLAAQAAGEPSTQMTLNTFHSAGSTVT
HVTEGIPRLRELLIYASVQKVAIVVPVEKATEVDEEAISRILQAGVATRLTDCMARVPAA
VTAGVDGGAAARVQTTPGYHYRVTRSAEGTQMTVSLLFSKGLLMHKQHAMCMSRVEHLQS
FTQTLKNFARQVVTALRGRSKDEHEGAGGPLRGTAQDPSSQIDDGGAAAGGGMSDNEDDM
EDRSTQMNTPALGAASAPSVAGSELGRDDMIPERGDNGGSSGSDEDDYEEEAVDAADGSR
RRKGGNGNSPLHKKSRAEEDDNEEEDEDVNGLFWKSASNGVTSSEAAAAASGKVNYDCFP
MVCAMYGNKKYRVEIAPLQREAATRDGVVPLPEDLFVVNVSIQTSDQVVTVIPDVLESAL
AQQMFPSWLTQFDSVTYTRKAEDPTSGEMVFQGSSATIRSVTAFLALFTVRARAIKVQKA
RSTDIRDMCTSFGVESGYKALFDELEKLFKRYSVDYHHLTLIADAATHRGVWENYNFTGV
ISHSASPLFQMTFASSKRFLHTALTRGVGDELNSISSAIMVGERPRVGTALVKVGQDPQI
LRDVIEKNFA
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcacaaccgccttccccttccacgcctacgtgggcgatctgcgcacgcgcacc
gtccacgagcgcaagagcggcgtctccctctccctcatgacctccgaggacatggcgcgc
ctcgccttcgtggaggtgcgcgtgcgctgcgggcaggaggatcggctggcgccatggaca
ccagctgtgcggcgggacggcacgcacgccacgttctacgacacacgcatgggcaacttc
gacgcacgcacgttccctccgcaggcgtgctcgacttgctgtaacacgctcaactccaaa
tacggcaacgagcgctgtcagggtcactacgggtacatcagcatgccgcgtcgctacccg
aacgacccgaaccggtcacaagagcgcctcagcgtcattaacccgcaccttgcccaggag
gtggagcagctgctgcaagccgagtgcttcttctgtcaccgcttccgtgtaccggagttc
gacgtgatgcgctatcagcaggcactgcgcctcgtcgactccgggttgatcggcgaggca
ctgcggttccttgacatggtggccaacgcgcatggacaggacatgcgcagtcgacgccgc
cgcgacgccaacgagaccgtcatcaacgacatccctcttatgctggatcacgtggatacg
ctgctgcgccgccgcggagccggtgcaccgcctctgcccagggtagcgtccggcgaggcg
ggtgcgcacggcgacgtcaatggggacgccggcgctgctggcgcgttggcgcacgcggat
ggcagcgatgacggcttccacaagccggtcctcgacgtccgcaatgaaatctgcaagcag
gcgctgcgcagcttccgcgagtttggcaacgtgtgctcgcactgccaaggcatttcgcct
cgcatcacgacgaagaacggccatctcttcttcttcttcaacaagaagaacgccgacttc
aacgtggcaaacggcgggctgacgacggcgcagctgcgggaatgggaggagatgaactat
cgccagggccgcagccacacgtacttccgcacgtcgtgggtgcgagagcacatcaagcag
ctgtgccagcgcgagtccgccattcttgcggctctcttctcgcacctcggcgaggccacc
ctacacatgccgtacgcctgctcgctcccgtcgacgtactactacaaggttttctttgtg
gacaagctgctcgtgccgccgctgcccctgcgcctgtcgtcgggcgtgcagatctccgag
tccggcggcatcatccccgatgccggcacacgtgccctgtctgacgtgctcgagttcgtc
gagcagatcgaggcgtactacgtcctcgcgaaccactcgaccccagagcgcaacctcgtc
agcacagcgcaagagattgcgcaggagcacaacctgcggaacttgcaggcgaaggtgacg
gaggtgtacacggatgtgctggagagctttgcgaagaaagagggcctgttccgcatgcac
atgatgggcaagcgtgtgaaccaggcgtgccgtagcgtcatctcacccgattacttggtg
gagccgaacgaggtgctgctgccccgccccttcgcccgcgcgctgacattcccggagctg
gtgagcagctactcgccagcgcgcatgatgttcctcaagcggtgtgtcatgaacggcccg
gatgtgtacccgggcgccacacacctagaaatcggcctgccgagcggtgagacgcgcttc
gtcgacttgcacgtgccggagctgattcggcggcagcacgccatgaagtacttcgcgatg
gcgcagaacggctcactcacagtccaccggcacatcctcgatggcgaccacctcatcttt
aatcgccagccgaccctgcacaaggtatccatgatggcgtaccgcgccaaggtgctgtcc
gggctgaagacactccgcttccactacgtcaacggcagctcgtacaacgccgacttcgac
ggtgatgagatgaacattcacgtcgtgcagagccttgaggcaaaggcggagctcgagtgc
ctgatggacgccaacctcaactacctcgtcccgacgtccggcaagccgattcgcggcttc
attcaggaccatgtggtcgccggcgtgctgctgacgctccgcgacaatttccttccgcac
cacacctttgtgcagtttgtgtacaacggcatcgcgccctacatgcacaagcatggcaag
cccctcagcgcgcacgcgacgctgacggaactcattccgatgcctgcggtcctaaagcca
cgcccgctatggacaggcaagcagctcatctccgtgattgtgcactacgtgactggcgtg
gtggagagtcgcggcggcgcgcccaagagtaacggcgtcagcatgcacggcacctccctc
atccaaccgagcacctacactaccacagacccccacaccggcgagctagtcgctgcgtca
cgcaagtgcatggaggacgaccacgtgcagttctttgagagcgagctcatcaccggcatc
ctgtgcaagaaccagctcggctccagcaacctctccgttgtacacgtcattcacgaaatc
tacgggccacacatggttggcgagctcttcggcgcgctcggtcgcgtgctgtcgatgagc
ctgcagcgcgaaggcttttccattggcatggatgacatgatgctcttgcaggaggagcgg
cgcacggcgctgctgcgcgagctggatagcgcgccgctcagcctcccagacgacgaggcg
acggtgatgcccgtgatcatggggatggcgacaagcctccagaaggaattcgtaccggga
cgcatgctgcggcctttcccgcacaaccagctgcttaccatgaccatgtcgggtgcaaag
ggcagcaacacgaacactattcagatgtcgcttggtctcggccagcaactcttcgacgga
cgccgcgtgaagcgcatgaactcgggcaagacgctgccgccgttcttcgtcgcggagacg
cgagcccgctcgctgggctacgcgatcggccgcttcacctccggtattcggccggcagag
tacacctttcacgccatggccggccgtgatgggctcatcgacacggccgtcaagacttcc
cgctccgggcacctgcagcggtgcctagtcaaaggcctggagagcctcgtcgtgcagtgg
gaccactccgtgcgcgacgccaacggcagcgtcatccagttcctctacggcggcgacgga
ctcgacccgatgcggacctcgtccctgcaggcgtgggaggtggtcaaggacaactgcgtc
gacctcggtcgaaagatgaacgtgaacaccggcgtgatgacgggcgaggaagaggccgag
gaggcggcgtcgcgcaacagccagggcaagcgcgagcgcccccacgaggcggccgcggcg
atgcgtgcggcgcagcgtgcgttgctcgaggcggaggcgcagcgcgacccactccccgct
cactacaaggcgagccttgacacgtacctggagaccaaggcgcagtatcctctcttcaag
aaggtatcgcaagtcgcgcggtgggccaagaacggcgtcctgaacgagaagctgcgcgag
aagcgcgaggagagcattcggtactaccgcgacgtgatgacggagctcacgacgcgacgg
cgggtgcgggcgtactgcgacgctggcgagccagtcggcctgctggcggcgcaggccgcc
ggtgagccgtcaacgcagatgacgctcaacactttccacagcgccgggtcaaccgtgacg
cacgtgacggagggaattccgcgcctgcgtgagctgctcatctacgcctctgtgcagaag
gtggccattgtggtgccggtggagaaggcgacagaggtggacgaggaggcgatctcgcgc
attctgcaggccggcgtagcgacgcggttgacggactgcatggcccgcgtacctgctgct
gtcacagcgggtgtggacggcggtgcagcggcgagggtgcagacaacgccggggtaccac
tatcgggtcacccgcagcgctgagggcacacagatgacggtgtcgcttctcttctccaag
gggctgctcatgcacaagcagcacgccatgtgcatgtcgagagtcgagcacctccagtcc
tttacacagactctgaagaactttgcacggcaggtggtgacggcgctgcggggtcgctcg
aaggacgagcacgaaggcgccggcgggccgctgcgtgggacagcgcaagacccgtcttcc
cagattgacgacggcggcgccgcggccggcggcggcatgagtgacaacgaggacgacatg
gaggatcggtccactcagatgaacacgccggcgctcggggccgcctcggcgccatccgtc
gccggcagcgagcttggacgtgacgatatgatcccggaaaggggcgacaacggcggcagc
agcggcagtgacgaggacgattacgaggaggaggcggtggacgctgcggacggctcgcgg
cggcgcaagggcggcaacggcaacagccccctgcacaagaagtctcgagcagaggaagac
gacaacgaggaggaggatgaggacgtcaacggattgttctggaagagcgccagcaacggc
gtcactagcagcgaggcggctgccgcggcgtctggcaaggtgaactacgactgctttcct
atggtgtgcgccatgtacggtaacaagaagtatcgggtggaaatcgcgccgctgcagcgg
gaggcggccacccgcgacggagtcgtgccgctaccggaggatctctttgtggtaaacgtg
tcgatacagacgtcggaccaggtggtcaccgtcatcccggatgtgctcgagagtgccctg
gcgcagcagatgttcccgtcgtggctcacgcagttcgactctgtcacgtacactcgcaag
gctgaggacccgacgagtggcgagatggtgttccagggcagctcggcgacgattcgcagt
gtgacagcgttcctcgctctcttcaccgtccgcgcacgcgccatcaaggtgcagaaggcg
cggtccaccgacatccgcgacatgtgcacctccttcggcgtggaaagcggctacaaggct
ctcttcgatgagctggaaaagcttttcaagcgctactccgtcgactatcaccacctcacc
ctcatcgcggacgcagcgacccaccgtggcgtgtgggagaactacaactttaccggcgtc
atctcccacagcgccagcccactcttccagatgacctttgcgtcgtcaaagcgctttctg
cacacggccctgacgcgcggcgtcggcgacgagttgaactccatcagctccgccatcatg
gtcggtgagcgccctcgcgtcggaacggcgctagttaaggtgggccaggacccgcagatc
ttgcgcgatgtcatcgagaagaactttgcctga
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integrated database retrieval system
