Listeria monocytogenes 6179 (serotype 1/2a): LM6179_02316
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Entry
LM6179_02316 CDS
T03159
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lmoq
Listeria monocytogenes 6179 (serotype 1/2a)
Pathway
lmoq03030
DNA replication
lmoq03410
Base excision repair
lmoq03420
Nucleotide excision repair
lmoq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmoq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LM6179_02316 (polA)
03410 Base excision repair
LM6179_02316 (polA)
03420 Nucleotide excision repair
LM6179_02316 (polA)
03440 Homologous recombination
LM6179_02316 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmoq03032
]
LM6179_02316 (polA)
03400 DNA repair and recombination proteins [BR:
lmoq03400
]
LM6179_02316 (polA)
Enzymes [BR:
lmoq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LM6179_02316 (polA)
DNA replication proteins [BR:
lmoq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LM6179_02316 (polA)
DNA repair and recombination proteins [BR:
lmoq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LM6179_02316 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LM6179_02316 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
Enkurin
LTD
HHH_2
XPG_I
FeoB_N
Motif
Other DBs
NCBI-ProteinID:
USB80543
LinkDB
All DBs
Position
complement(1127511..1130138)
Genome browser
AA seq
875 aa
AA seq
DB search
MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAG
KTTFRHTTFKGYKGGRQKTPSELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKA
EADGMKVAIITGDRDLTQLASEKTTVYITKKGIADMETNTPETLKEKYNLTPEQIIDMKG
LMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHAEEISGKKLKEKVLENKELAILS
KELATINVDSPIECIVESTKYDGYQTEKVIPLLKEMNFTTLLKNIEGDTPEEAKELKELS
FEIVTELKEKHFGGKTALYVELENDNYHTANFIGLTVHSSQGTYFFTKETAENSEAFREW
IESEQTKVVYDAKKTMVAMNRIGLAISGITFDIMLASYLLNPSDSIDDFTSVAVRHDYTE
VETDEAVYGKGAKRSTPEESIVASHLARKAVAIADLEKRLVADLEENEQLALMEDLELPL
TFVLAEMEMQGVSVDTERLENMKVELAGRLKTLEESIHSLAGEAFNINSPKQLGVILFEK
LGLPAVKKTKTGYSTAADVLESLSGKHAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHK
VHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFVPSKPGWKMFSADYSQVELRV
LAHISEDENLIYAFKHDYDIHTKTAMDVFHVEQDEVDSLMRRQAKAVNFGIVYGISDYGL
SQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNF
NVRGFAERTAMNTPIQGSAADIIKKAMILMSERLVSEKLKAKLLLQVHDELIFEAPEAEI
AKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaattagtattaattgatggaaatagtattgcgaatcgcgctttttatgcgtta
ccacttttaaataacgataaaggtgtttacacaaatgcggtgtatggattcgcaatgatg
ttgatgaatgtactcgaaaaagaaaaacccagccatgtgctcgttgcatttgatgctgga
aaaacaactttcagacatacaacatttaaaggttataaaggcggacgtcaaaaaacccca
agtgagttatctgaacagtttccattcatccgagaacttttaacggcgtatgatatcccg
caatatgaacttgccaattacgaggcagatgatattatcggaacattgacgaaaaaagca
gaagcagatggtatgaaagtagcaatcattaccggagaccgcgacttaacgcaattagct
tctgaaaaaacaacggtttatattactaaaaaaggtatagccgatatggaaaccaacaca
ccagaaacactaaaagaaaaatacaatctgactcctgaacaaatcattgatatgaaaggt
ttaatgggcgattcctccgataatattcctggtattccaggcgttggtgaaaaaacagcc
ttaaaactcttacatgaatttggcggaacggtggaaagtgtgttagagcatgccgaggaa
atttccggtaaaaaactaaaagaaaaagtactggaaaataaagaattagctattttaagt
aaagaactagctacaatcaatgtggattcaccgattgaatgcatagtcgaaagcacaaaa
tatgacggttatcaaacggaaaaagtaattcctttattaaaagaaatgaactttacaaca
cttttgaagaatatcgagggagatacaccggaagaagcaaaagaattaaaagaactatct
tttgaaatcgtaacagaattaaaagaaaaacattttggtgggaaaactgcgctttatgtg
gagttagaaaatgataattatcatacagctaatttcattggattaacagtacattctagc
caagggacgtatttctttacgaaagaaactgctgaaaatagtgaggcattccgtgaatgg
atagaaagtgaacaaacaaaagtagtgtatgatgcgaagaaaactatggttgcaatgaat
cgcattggtttagcgatttctggtattacctttgatatcatgttagcttcttatttacta
aatccatctgactcgattgatgattttacaagcgttgcagtaagacatgattacacagaa
gtcgaaacggatgaggcagtctacggaaaaggcgccaaacgtagcacgccagaagaaagc
attgttgcgtcccacttagctagaaaagcggtagccattgctgacttagagaaaagactg
gttgctgatttagaggaaaatgaacaattagctttgatggaagatttagagttgccacta
acttttgtattagcagaaatggaaatgcaaggggttagtgtagatacagaacgtctagag
aatatgaaagtggagctagcgggtagactgaaaacattggaagagtcgatccattctcta
gccggcgaagcatttaatattaattcaccgaaacaactaggtgtaattttatttgaaaag
cttggtctcccagccgtcaagaaaacaaaaacaggttattcaactgctgccgatgtactg
gaaagtttatctggtaaacacgcgattattgatgaaattttgttatatcgtcaacttggt
aaaattcagtccacttatatcgaagggctgcttaaagtgacagataaagaaacacataaa
gtgcacacacgtttcaaccaaacattaacgcaaacaggacgcttaagttcagttgatccg
aacttgcaaaatatccctattcgtttagaagaaggacggaaaatcagacaagttttcgta
ccgagtaaaccaggttggaaaatgttttcagccgattattcgcaagtagagctgagagtc
ttagcacatatttcggaagatgaaaatttaatttatgcatttaagcacgattatgatatt
catacgaaaacggcgatggacgtgtttcatgttgagcaagacgaagtggattcattaatg
cgtcgtcaagctaaagcggtaaactttggtattgtatatggaattagtgattatgggctt
tcgcaaaaccttggtattacgcgtaaagaagcaaaagacttcattgatcgttactttgtg
agttatccagccgtgaaagaatatatgcaagacattgtccgttttgcgaaagaaaaaggc
tatgtagagaccattttacatcgtcgtcgttatattccggagattgttagtcgtaatttt
aatgttcgcggatttgcagaaagaactgcgatgaacacgcctattcaaggtagtgccgct
gatattatcaaaaaagcgatgattcttatgagcgagcgtttagtatccgaaaaattaaaa
gccaaattattacttcaagtgcacgatgaattaatcttcgaagcacctgaagctgaaata
gctaaattagaagaaattgtcccagatgttatggaaaatgcagtagagctttctgtgccg
ctaaaagtagatagcgcctttggtgacacttggtacgacgcgaaataa
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