Listeria monocytogenes R479a (serotype 1/2a): LMR479A_2164
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Entry
LMR479A_2164 CDS
T03180
Symbol
rsmD
Name
(GenBank) putative ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
lmr
Listeria monocytogenes R479a (serotype 1/2a)
Brite
KEGG Orthology (KO) [BR:
lmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmr03009
]
LMR479A_2164 (rsmD)
Enzymes [BR:
lmr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
LMR479A_2164 (rsmD)
Ribosome biogenesis [BR:
lmr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LMR479A_2164 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
Methyltransf_31
MTS
Methyltransf_15
PrmA
Methyltransf_25
UPF0020
N6_N4_Mtase
TRM
MethyltransfD12
Methyltrans_SAM
RsmJ
Methyltransf_16
Met_10
Methyltr_RsmB-F
N6-adenineMlase
Motif
Other DBs
NCBI-ProteinID:
CDM17380
LinkDB
All DBs
Position
complement(2142162..2142719)
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AA seq
185 aa
AA seq
DB search
MRVIAGERKGHALKAVPGNNTRPTTDKVKESLFSIIGPFFDGDMVLDLFAGSGGLGIEAL
SRGAERAVFIDQAALAIKTIRQNLEGCHFTERAEVYRNDAERALKLLHKNEWKFDLIFLD
PPYKKQQLEKLLGTLEKLELVNENGRIICEHDKEAIMPDTIGKFEKIKSVSYGITVLSIF
EFQEA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgagagtcattgcaggagaacgaaaaggacacgctttaaaagctgttccaggaaacaat
acgagaccaactacagataaagtaaaagaatccttattttcgattatcggtccttttttt
gacggggatatggtgcttgatttatttgctggcagtggtgggcttggaatcgaagcgttg
agcagaggagcagaacgagctgtttttattgaccaagcagcgctcgcaattaaaacaatc
cgacaaaacttagaaggatgccattttacagagcgcgcggaagtatatagaaatgatgcc
gaacgagcactcaaattactccataaaaatgagtggaaattcgaccttatcttcttagat
ccaccatataaaaagcaacaattagaaaaattactaggaactttagaaaaattagaatta
gttaacgaaaatggaagaattatttgcgagcatgacaaagaagcaatcatgccagataca
atcggtaaattcgagaaaatcaaatcagtttcttatggaattactgttttatctatattt
gaatttcaggaggcgtag
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