Lagopus muta (rock ptarmigan): 125685280
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Entry
125685280 CDS
T09141
Name
(RefSeq) T-cell surface glycoprotein CD4-like
KO
K06454
T-cell surface glycoprotein CD4
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03250
Viral life cycle - HIV-1
lmut03260
Virion - Human immunodeficiency virus
lmut04060
Cytokine-cytokine receptor interaction
lmut04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
125685280
03260 Virion - Human immunodeficiency virus
125685280
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
125685280
04514 Cell adhesion molecules
125685280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lmut04090
]
125685280
CD molecules [BR:
lmut04090
]
Proteins
125685280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
Tcell_CD4_C
ig
Ig_2
I-set
C2-set
CD4-extracel
Ig_4
C1-set
BppU_N
Motif
Other DBs
NCBI-GeneID:
125685280
NCBI-ProteinID:
XP_048784179
LinkDB
All DBs
Position
1:77321816..77333481
Genome browser
AA seq
487 aa
AA seq
DB search
MERCGAVVSSVLAVVLVLQLGLTPIMAQQEQQTGLAGKEVILNCKITNHQRDQNCAWKYK
YKEVSSIIISFSKTKIFKGKAPMTHRSESKLDSKQLKVSDLSLDDAGIYTCTCYSPEVSI
SLHVFKLTVSSNGYFLANEDLELTLMQNSSHSQPHLSIELFNISNKIVTTEILQNEAPQK
YTLKLKQLKATDSGTWMCHVYSNSPLINQNISFDVKVLGFGEERSEIMYTTVGNAVILSW
HLNFRKIEWKEGFIGKLNWEPQENAAIHELFNFSVTTRRELHKTKKSNHIWFEIPGRKTD
STIEVKIPKAQLNHSGRYRCQLEINSRRIWSTRALVVMQVSANPAGPLSRGSKMTLLCQV
SGPLPPNAHLLWERANGTEMEIKKSKQQEAKVEVNVSAPGLWNCHLMENNNRKISLNYTV
EEAHVWNSYAVIGAIIGASVLVISLACVCIITAMSWQRRRKRAKRMAQAKQYLLEKKTCQ
CQRRMYK
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggagaggtgtggagcagtggtgagcagtgtgcttgcagtcgtcttggttctgcagctg
ggtctgacccccattatggctcagcaagaacaacagactgggcttgcaggaaaggaggtg
atcctgaactgtaaaatcacaaaccatcagagagatcagaactgtgcttggaagtacaag
tataaggaagtttcttctataattataagcttttctaaaacaaagatttttaaaggcaaa
gccccaatgactcatcgatctgaatcgaagttggacagcaaacagctgaaggtgtcagac
ttgagcctggatgacgctggcatctatacctgtacatgttactctcctgaagtcagtatc
tcactgcatgtctttaaattgacagtctcttcaaatgggtacttccttgcaaatgaagat
cttgagctcactttaatgcaaaattcatcccactcacaaccccatctcagcatcgaattg
tttaatattagcaataagatagtgacaacagaaattttgcaaaacgaggctcctcaaaaa
tacacactgaagctaaagcaactgaaggctacggacagtggaacctggatgtgccacgtt
tattcaaactctccattgattaatcagaacatctcctttgatgtgaaggtattaggtttt
ggggaagaacgctcggaaataatgtacactactgttggcaacgctgtgatcttgtcatgg
catctgaacttcaggaagatagaatggaaagaaggtttcataggaaaactgaattgggag
ccacaggaaaatgcagccatccatgagctgttcaatttcagtgtcacaacacgtcgagag
ctgcataaaactaaaaaaagcaaccacatttggtttgagatacctggaaggaaaactgac
agtactatagaagttaaaatccccaaagcccagttaaatcactctgggcggtatcgatgt
cagctggagatcaacagtagaagaatctggagcacgagggcactagtggtgatgcaagtc
tcggctaaccctgctgggccactctccagaggaagcaagatgaccctgctctgccaggtg
tctggtcccctgccacccaatgcccacttgctctgggaacgtgcgaatgggactgagatg
gaaatcaagaagtcaaaacagcaagaagcaaaagtggaggtgaacgtcagtgctccagga
ttgtggaactgtcacctcatggaaaacaataacagaaagatcagccttaattataccgtg
gaggaagctcatgtttggaatagctatgcagtaattggagcaattattggagccagtgtg
ttggtgatcagccttgcatgcgtgtgcataatcactgctatgagctggcagaggagaagg
aaacgggcaaaaaggatggcacaagcaaaacaatacttgctggaaaagaagacatgccag
tgtcaacgccggatgtataagtag
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