Lagopus muta (rock ptarmigan): 125686852
Help
Entry
125686852 CDS
T09141
Symbol
APC
Name
(RefSeq) adenomatous polyposis coli protein isoform X1
KO
K02085
adenomatosis polyposis coli protein
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04310
Wnt signaling pathway
lmut04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
125686852 (APC)
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
125686852 (APC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lmut01009
]
125686852 (APC)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125686852 (APC)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lmut04812
]
125686852 (APC)
Protein phosphatases and associated proteins [BR:
lmut01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125686852 (APC)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
125686852 (APC)
Cytoskeleton proteins [BR:
lmut04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
EB / APC
125686852 (APC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm_APC_u3
APC_basic
EB1_binding
APC_r
APC_u5
APC_rep
APC_u14
APC_u9
APC_u15
APC_N_CC
SAMP
Arm
APC_u13
APC_15aa
Suppressor_APC
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
125686852
NCBI-ProteinID:
XP_048787316
LinkDB
All DBs
Position
Z:50155843..50249466
Genome browser
AA seq
2849 aa
AA seq
DB search
MAAASYDQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNMKEVLKQLQGSIEDEAM
ASSGQIDILERLKELNLESTSFPGVKLRPKVSVRSYGSREGSVSSRSGECSPVPMGSFPR
RGFMNGSRESTGYLEELEKERSLLLAELEKEEKEKDWYYAQLQNLTKRIDSLPLTENFSL
QTDMTRRQLEYEARQIRAAMEEQLGTCQDMEKRAQVRVARIQQIEKDILRIRQLLQSQAA
EAERAPQGKHDAGSHDTERQSEGQGAPEISMSTSNTGQGSAARMDHETASVMSSSNNYSV
PRRLTSHLGTKVTEDYKPQVEMVYSLLSMLGTHDKDDMSRTLLAMSSSQDSCIAMRQSGC
LPLLIQLLHGNDKDSVLLGNSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHLLEQ
IRAYCETCWEWQEAHEQGMDQDKNPMPAPVDHQICPAVCVLMKLSFDEEHRHAMNELGGL
QAIAELLQVDCEMYGLTNDHYSVTLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQ
LKSESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVKKESTLKSVLSAL
WNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSSLIATNEDH
RQILRENSCLQTLLQHLKSHSLTIVSNACGTLWNLSARNAKDQEALWDMGAVSMLKNLIH
SKHKMIAMGSAAALRNLMANRPAKYKDANIMSPGSSLPSLHVRKQKALEAELDAQHLSET
FDNIDNLSPKASHRNKQRHKQNIYSEYVLDSNRHDDGVCRTESFSTGNMTVLSPYLNSTV
LPGSSSSSRGNIENCLSEKDRSLDRDRAVGLNAYHPATENSGNSSKRIGMQISTAAAQIA
KVMEEVTSMHIPQDDRSSSSTSEMHCLTEDRNTTRRAASAHTHSNTYFPKSENSSRPCPV
PYTKMEYKRASNDSLNSVSSSDGYGKRGQMKPSIESYSEDDESKFCSYGQYPADLAHKIH
SANHMDDNDGELDTPINYSLKYSDEQLNSGRQSPSQNERWARPKHIIDDEMKQNDQRQSR
SQSTTYPVYTESGDDKHMKYQSPFGQQDCVPSFRSRGSNGSDQNRVGSTLGINQKVNQSL
CQVDDYDDDKPTNYSERYSEEEQHEEEDRPTNYSIKYNEEEHHVDQPIDYSLKYSTEVPP
SSQKPSFTFSKTSSVQSSKTDHISSSSGNTSAPSAGSKRQNQLHPSSAQSRGSHAQKTAS
CKTPSINQETIQTYCVEDTPICFSRCSSLSSLSSAEDEIGRDQSARVTDTNNTLQIAELK
ENSGALSTEAAVSEITSTSQHIRTKSSRLPTSSLSPSDSSRHKAVEFSSGAKSPSKSGAQ
TPKSPPEHYVQETPLMFSRCTSVSSLDSFESRSIASSVQSEPCSGMVSGIISPSDLPDSP
GQTMPPSRSKTPPPAQGVQVKRDVAKGKVPSAEKREPGPRQAAVNAAVQRVQVLPEADTL
LHFATESTPDGFSCSSSLSALSLDEPFIQKDVELRIMPPVHENEHGNEAEPEQSDDTKDN
QEDKAEKPSEAEKDILDDSDDDDIEILEECIISAMPTKSSRKAKKPSQASAPKIPPPVAR
KPSQLPVYKLLPSQSRLQSQKHVSFTPGDDMPRVYCVEGTPINFSTATSLSDLTIESPPN
ELANVDNVGTGAESGEFEKRDTIPTEGRSTDDVQKVKSISVSGPGLDDDKTEEGDILAEC
INSAMPKGKSHKPFRVKKIMDQIQQASTSLNNKNQSEIEKKKPTSPVKPVPQNSEYRARV
RKNTESKSQINNERSYPENRDTKKQNLKNNSRDFNDKLSNNEERVRGSFTFDSPHHYTPI
EGTPYCFSRNDSLSSLDFDDDDVDLSREKAELRKGKEAKEIETKDCPNVEQPSSQQPSNR
TQVCQKHPTSRSQSKTFCQPNKDIPDRGAATDEKMQNFAIENTPVCFSRNSSLSSLSDID
QENNNNKEEEPVKRTEAPDSQIESNRPQTSGYAPKSFHVEDTPVCFSRNSSLSSLSIDSE
DDLLQECISSAMPKKKKPSRIKSESEKSNSRNIGGMLAEDLTLDLREIQRPDSEHGFSPD
SENFDWKAIQEGANSIVSSLHQAAAAASLSRQASSDSDSILSLKSGISLGSPFHLTPDQE
EKPFTSNKGPRILKPGEKSTLESKKVESESKGIKGGKRVYKSIITGKARSNSEVSSQLKQ
PQQTSVPSISRGRTMIHIPGVRNSSSSTSPVSKKGPPFKNTNSKSPSEGQSSASSPRGVK
SSVKPEPAPVTRQLSGLNQSGSSKGPSRSGSRDSTPSRPQQQPLSRPLQSPGRNSISPGR
NGISPPNKLSQLPRTSSPSTASTKSSSSGRMSYTSPGRQMSQQNLTKQTALTKNTSSIPR
SESASKGLNQILGSGASNKKTDLSRMSSAKSSGSESDRSERPVLVRQSTFIKEAPSPTLR
RKLEESASFESLSPSRPDSPTRSQLQTPVLSPSLPDMSLSTHSTAQTSGWRKLPPNLSPS
VEYDGRPAKRHDITRSHSESPSRLPINRSGTWKREHSKHSSSLPRVSTWRRTGSSSSILS
ASSESSEKAKSEDEKQHGSSLSGQKQSKESQAPAKGTWRKIKENEIPQIMNDPQHPSSSA
TSSSDSKTLIYQMAPAVSKTEDVWVRIEDCPINNPRSGRSPTGNTPPVIDSVSEKGVVNG
KDSKEIQEKQNPGNGSVPVRTIGLENRLNSFFQMDSPDKKGNETKPLQTNPVPAPENNES
TVSERTPFSSSSSSKHSSPIGAVAARVTPFNYNPSRRKSSVDNSSARPSQIPTPVNNSTK
KRDSKSENTDSSGTQSPKRHSGSYLVTSV
NT seq
8550 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagcttcttatgatcagttgttaaagcaagttgaggcattaaagatggagaac
tccaaccttcggcaagagctagaggacaactcaaatcacctaaccaaactggaaacggag
gcatctaacatgaaggaggtgctgaaacagctacagggaagtattgaggatgaggcaatg
gcatcatctggacaaattgacatactggaacgacttaaagaactgaacctggagagtacc
agctttcctggagtgaaattaaggccaaaggtgtctgtgcgctcatatgggagccgggaa
gggtctgtgtcaagccgttcaggagagtgcagtcctgttcccatgggatcgtttccaaga
agaggatttatgaatggaagcagagaaagcactggttatttagaagagctagaaaaagag
agatctcttttgcttgcggaacttgagaaggaagagaaagaaaaggactggtattatgcc
cagctccagaaccttactaaaaggattgatagtctcccccttactgaaaatttctccttg
caaacagatatgaccagaaggcagctggagtatgaggcaaggcaaatcagagctgcaatg
gaagagcaattgggtacttgtcaggatatggagaagcgagcacaggtgagggtggcaaga
attcagcagatagagaaggatattcttcgtatacgacagctcctgcaatcacaagcagca
gaagcagagagagcacctcaaggcaagcatgatgcaggttcccatgatacagagaggcag
agcgaaggtcaaggagcaccagaaatcagtatgtcaactagcaatactggtcagggttct
gctgctcgaatggaccatgagacagccagtgttatgagctctagtaataactactctgta
cctcgcagactgacaagtcatctgggtaccaaggtaaccgaagattacaaaccacaggtg
gaaatggtgtactcattgttatcaatgcttggtactcatgataaagatgacatgtcaaga
acattgctagcaatgtctagctctcaagacagctgcatagctatgcgtcagtctggatgt
cttcctcttctcatccagcttttacatggcaacgataaagactctgtcttgttagggaac
tctcgaggtagtaaggaggcccgtgccagagccagtgcagcgctgcataacatcattcac
tcccagcctgatgataagcgaggcagacgggaaatccgcgtgctccatcttttggagcag
atccgtgcttactgtgaaacatgttgggaatggcaggaagcacatgaacaaggcatggac
caagataaaaacccaatgcctgcaccagttgatcatcaaatctgtcctgcagtgtgtgtt
ttaatgaaactttcatttgatgaagaacacaggcatgctatgaatgagcttggaggtctg
caagccattgctgaactgctgcaagtggactgtgaaatgtatgggcttacaaatgatcat
tatagtgtcacattgaggagatacgctggaatggctctgacaaacctgacttttggagat
gtagcaaacaaggctactttatgttcaatgaagggctgcatgagagctcttgtagcccaa
ctgaagtctgaaagtgaagacttacagcaggtcattgcaagtgtgttgaggaacttgtcc
tggcgtgcagatgtgaacagtaaaaagacactacgagaagttgggagtgtgaaagcactg
atggaatgtgctttagaagttaagaaggaatcaaccctaaaaagtgtcttgagtgcctta
tggaatctgtcagcacactgtactgagaacaaagccgatatatgtgctgttgatggtgct
cttgcatttctagttggtacactgacataccggagccaaacaaacacacttgccatcata
gaaagtggaggaggaatactaagaaatgtttctagcttaattgctactaatgaggaccac
aggcaaatcttgcgagagaacagttgcttacaaaccttgttacaacacttgaagtcacac
agtttgacaatagtcagtaacgcatgtggaaccctgtggaatctttctgcacgaaatgca
aaggatcaggaggcactttgggacatgggagcagtcagcatgctcaaaaatctcattcac
tcgaaacacaaaatgatagcaatgggcagtgctgcagctctaagaaatctcatggcaaac
aggccagcaaagtataaagatgctaacattatgtctccaggatcaagcttaccatctctt
catgttagaaaacaaaaggcactggaagcagaattagatgcacaacatttatcagagact
tttgacaatattgataatttaagcccaaaagcatctcaccgtaataagcagagacataag
cagaatatatacagtgagtatgttttggactctaatcgtcatgatgatggggtatgcaga
acagagagttttagtactggtaacatgactgtactttctccatatttaaattctacagta
ttgcctggatcctcttcttctagtagaggaaacatagaaaattgtctgtctgagaaagac
agaagtcttgacagagatcgagcagtaggtttaaatgcctatcatccagctacagagaac
agtggaaactcctctaagagaataggaatgcaaatttctacagctgcagctcaaattgcc
aaggttatggaagaagtgacaagcatgcatattccacaagacgacagaagttccagttcc
acttctgaaatgcactgtttgacagaagacagaaataccacaaggagagcagccagtgcc
catacacactcgaatacatactttccaaaatctgagaattcaagcaggccatgtcctgtg
ccttacacaaagatggaatacaagagagcatcaaatgacagcttaaatagtgtcagcagc
agtgatggctatggtaaaagaggccaaatgaaaccttccattgaatcttactctgaggat
gatgaaagtaaattttgtagttatgggcaatatccagctgacttggcacataagatacat
agtgcaaatcacatggatgacaatgatggagaactagacactcctattaactatagtctt
aaatattcagatgaacaattaaattctggaaggcagagtccttctcagaatgaaagatgg
gcaaggcctaagcatataatagatgatgaaatgaaacaaaatgaccaaaggcagtcaagg
agccaaagtacaacataccctgtgtacactgaaagtggagatgataaacacatgaaatat
caatcaccttttggacaacaagactgtgttccttcatttagatcaagaggatccaatggt
tcagatcagaacagagtagggtcaactcttggaatcaatcagaaagtaaatcagtccttg
tgccaagtcgatgattatgatgatgataagccaaccaactacagtgaacgctattctgag
gaggaacagcatgaagaagaagacagaccaaccaattacagcataaagtacaacgaagag
gaacaccatgttgatcaacccattgattatagtctgaagtattcaacagaagttcctccc
tcttctcagaagccatcttttactttttcaaagacttcttcagtgcagagcagtaaaact
gaccatatttcctcaagcagtggaaatacatcagccccttcagcaggttcaaagaggcag
aatcagcttcatccaagttctgcacagagcagaggcagtcatgctcaaaagaccgcctcc
tgtaagactccttccattaatcaggaaactatacaaacttactgtgtggaagatacacca
atatgtttttcaaggtgtagctctttgtcatctttgtcatcagctgaagatgaaataggg
cgtgatcaatccgcacgtgtgactgatactaataatacactacagatagcagaactgaaa
gaaaacagtggggctctatctacagaagctgcagtaagtgaaatcacatcaacatcacaa
catattagaacaaaatccagtagacttccaacttccagtttatcaccttctgattcctcc
agacataaagctgttgaattttcttcaggtgccaaatctccctcaaagagtggtgcacag
actcccaaaagcccaccagaacattatgtacaggaaactcctctcatgttcagtagatgt
acttctgtaagttccctggatagttttgaaagccgttcaattgctagttcggttcagagt
gagccttgcagtggaatggtgagtggtattataagtccaagtgatcttccagacagccca
ggacaaacaatgcctccaagcagaagtaaaacaccaccccctgctcaaggagttcaggtg
aaaagagatgtagctaaaggtaaagtacctagtgcagaaaagagagagcctggtcctaga
caagcagctgtaaatgcagcagttcagagagttcaggtactgccagaggctgatacgctg
ttacattttgccacagaaagtacaccagatgggttttcttgctcttctagcctgagtgct
ctgagtcttgatgagccatttatacagaaagatgtagagttaagaataatgcctcctgta
catgaaaatgaacatggaaatgaagcagagcctgaacagtcagatgatacaaaggataac
caagaggataaagcagagaagccttctgaagcagaaaaagacattctggatgattctgat
gatgatgatattgaaatactggaagaatgtattatttctgcaatgcctacaaagtcttca
cgtaaagccaaaaagccttctcaagcatctgctccaaaaatacctcctcctgtagccaga
aagccaagccagctgccagtttataaacttctgccttcccaaagccgattgcaatcccaa
aagcatgtgagttttacaccaggagatgatatgccacgagtatattgtgttgagggtaca
ccaataaatttttcaacagctacatctttgagtgatctcacaatagaatcaccaccaaat
gagttggccaatgtagacaatgtgggtacaggggcagagtcaggggaatttgagaagagg
gatactattcctacagaaggtagaagtacagatgatgttcagaaagtaaaaagcataagt
gtgagtggcccaggactggatgatgacaaaacagaagagggtgatattctggctgagtgc
attaactcagctatgccaaaaggtaaaagtcacaaaccttttagagtgaagaaaataatg
gatcaaatccaacaagcatctacatctttaaataacaaaaatcaatcagaaattgagaaa
aagaagccaacatcaccagtaaagcctgttccccaaaatagtgaatatagagcacgtgta
agaaaaaacacagagtctaaaagccaaattaataatgaaagaagctatccagagaacaga
gatacaaagaaacagaatcttaaaaataattctagagattttaatgacaaactttcaaat
aatgaggagcgtgtaagaggaagctttacatttgattcccctcatcattacacacctatt
gagggaactccgtattgtttttcacgcaatgattccttaagttctttggattttgatgat
gatgatgttgacctttcaagggaaaaggcagaattaagaaaaggaaaggaagcaaaggaa
atagaaactaaagactgccctaacgtggaacagccttcaagtcagcaaccaagtaatagg
acacaagtttgccaaaaacacccaacaagcagaagccagtctaaaactttctgtcagcca
aataaagatattccagacagaggggcagctacggatgagaagatgcagaattttgctatc
gaaaacacacctgtttgtttttctcgcaattcatctcttagttcccttagtgatattgat
caagaaaacaataacaacaaagaagaagaaccagtaaagcgaactgaggctcctgattca
cagatagaatcaaacagaccacagacttctggttatgcacctaaatcatttcatgttgaa
gacacaccagtatgtttctctagaaatagctctctgagttctctaagtattgactcagaa
gatgatcttttgcaggaatgcattagttctgccatgcctaaaaagaagaagccatcaaga
ataaagagtgaaagtgaaaaaagtaattccagaaatataggtggtatgctggcagaagat
ttaacactggatttgagagagatacagaggccagattcagaacatggtttttcacccgat
tcagagaactttgattggaaagctatacaggaaggtgcaaattctatagttagtagcctg
catcaagctgcagctgctgcatcactatctagacaagcttcatcagactctgattctatc
ctttcactaaaatctggtatttctctgggatcaccattccatcttaccccggaccaagaa
gaaaaaccttttactagtaataaaggtccacgaattcttaagccaggagagaaaagtaca
ctggaatctaaaaaagtagaatccgaaagtaagggaatcaaaggagggaaaagagtatat
aaaagtataattacaggaaaagctcgctccaattcagaagtttcaagtcagttaaagcaa
ccacaacaaacaagtgtgccttcaatttcacgtggcaggacaatgattcatattccggga
gttcgaaatagttcttcaagtactagtcctgtttccaaaaaaggccccccattcaaaaac
acaaattccaagagtcccagtgaaggccagagttcagctagttccccaagaggagtcaag
tcatcagtaaaacctgagccagctcctgtaactaggcaactgtcagggttgaaccagagt
ggatcaagtaaaggaccttctagatcaggatctagagactccactccttctagacctcaa
cagcagccattgagcaggcctctgcaatctccaggccgaaactcaatttccccaggaaga
aatggtataagtcctcccaacaaactgtctcagttgccaagaacatcatctcctagcact
gcttcaactaaatcttcaagttcaggtaggatgtcatatacatcaccaggcaggcagatg
agccagcaaaaccttacaaagcaaactgccttaactaagaataccagtagcattccaaga
agtgagtctgcttccaaaggattgaatcaaattcttggtagtggtgcatcaaacaaaaag
actgacttatccagaatgtcatcagcaaaatctagcggaagtgagtctgacaggtctgag
aggcctgttcttgttcgccagtcaacttttattaaagaagctccgagcccaactctaaga
cgtaaattggaagagtctgcttcatttgaatctctgtctccttccagaccagattctccc
acaagatcccaactacagactccagttttaagtccctcacttcctgatatgtctttatcc
actcattcaactgcccaaactagtggctggcgaaaattaccccctaatctgagcccttct
gtagaatatgatgggagaccagcaaaacgtcatgatataacgcgttctcattctgagagt
ccatctagattgccaatcaacaggtcaggaacatggaaacgtgaacatagtaagcattcc
tcatcacttcctcgtgtaagcacttggagaagaactggaagttcttcctcaattctgtca
gcttcttcagaatccagtgaaaaggcaaaaagtgaagatgaaaagcaacatggaagttct
ctttctgggcagaagcaaagtaaagaaagccaagcaccagcaaaaggtacttggagaaaa
ataaaagaaaatgaaatcccccaaataatgaatgatcctcagcatccttcctcgagtgcc
acaagtagctctgattccaaaactctgatttatcagatggcaccagctgtctctaagact
gaggatgtttgggtgaggattgaggactgcccaattaacaatcctcgatctggaaggtcc
ccaactggaaacactcctcctgttattgacagtgtttcagagaagggggttgtgaatggc
aaagattctaaagagattcaagaaaaacaaaatccagggaatggaagtgttcctgttcgt
accattggtttagaaaatcgtctgaactctttctttcagatggacagtccagacaagaaa
ggcaatgaaacaaaacctctgcagaccaatcctgttcctgcaccagaaaacaacgaaagt
actgtgagcgagcgtacaccattcagttccagtagttcaagcaaacatagctctccgatt
ggtgctgttgcagcaagagtaactcctttcaattacaatccaagccgtaggaagagtagt
gtggacaatagttctgctcggccatcccagataccaacaccagtaaataacagcacaaag
aaacgtgactcaaagtctgaaaatacagactccagtggaactcagagtcccaaacgtcat
tctggctcttacctggtgacttctgtttaa
DBGET
integrated database retrieval system
