Lagopus muta (rock ptarmigan): 125687132
Help
Entry
125687132 CDS
T09141
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut00310
Lysine degradation
lmut01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125687132 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lmut03000
]
125687132 (PRDM6)
03036 Chromosome and associated proteins [BR:
lmut03036
]
125687132 (PRDM6)
Enzymes [BR:
lmut01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
125687132 (PRDM6)
Transcription factors [BR:
lmut03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
125687132 (PRDM6)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125687132 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
Motif
Other DBs
NCBI-GeneID:
125687132
NCBI-ProteinID:
XP_048787929
LinkDB
All DBs
Position
Z:66722979..66796559
Genome browser
AA seq
570 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPQSGQLKSSGVLAQLQPPERAEPPADSLRQRPA
SLSSASSSSSTPSSSSASSCVAAAAASLAGLTALPVTQLPVFAPLQSSEPTAGGAPAPLQ
GKDLCGAGGGSKCGERASARFRCSAEELDYYLYGQQRMEIIPLNQHTSDPNNRCDMCADN
RNGECPMHGPLHSLRRLVGTSSAAAAAPPPEIPEWLRDLPREVCLCTSTVPGLAYGICAA
QRIQQGTWIGPFQGVLLLPEKVQAGAVRNTQHLWEIYDQDGTLQHFIDGGEPSKSSWMRY
IRCARHCGEQNLTVVQYRSNIFYRACVDIPRGTELLVWYNDSYTSFFGIPLQCIAQDENL
NVPSTVMEAMSRQDTLQPFNKSSKLSPATPQRSVVFPQTPCSRNFSLLDKSGSIESGFNQ
ISVKNQRVLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQCGH
CSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERCERS
FTQATQLSRHQRMPNECKPITESTESIEVD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggcgaccccggcggctccgcgttcctgaaggtggatcctgcctatctg
cagcactggcagcagctcttcccgcagagcggccagctcaagagcagcggggtcctcgcc
cagctccagccgcccgagagagccgagcccccggctgacagcctccgccagcgcccggcc
tcgctctcctctgcttcttcgtcctcgtctactccgtcttcctcatccgcctcgtcctgc
gtcgccgcggcggccgcgtccctggccggcctgaccgccctgccggtcacccagctgccc
gtcttcgccccgctgcagagctccgagcccacggccgggggagcgcccgctcccctgcag
ggcaaggacttgtgcggggccggcggcggcagcaaatgcggcgagcgcgcttccgcccgc
ttccgctgctcggccgaggagctggactactacctgtacgggcagcagcgcatggagatc
atccccctgaaccagcacaccagcgaccccaacaaccgatgcgacatgtgtgccgacaac
cgcaacggcgagtgccccatgcatggcccgctgcactccttgcggcgcttggtgggcaca
agcagcgcggccgcagccgccccgccgcccgagatccctgaatggctgcgggaccttccg
cgtgaggtctgcctctgcaccagcaccgtgcctggcctggcctacggcatctgcgctgcg
cagcgcatccagcagggcacctggatcgggcccttccagggcgtcctgctgctgccggag
aaggtccaagcgggagccgtcaggaacactcagcacctctgggaaatatatgaccaagat
gggacattgcagcactttattgatggtggagaacccagtaagtcaagctggatgaggtac
atccgatgtgcaaggcactgcggggaacagaacttaacagtggttcagtacagatcaaat
atattttaccgggcttgtgtagatatccctcgtggcacagagctgttggtgtggtacaat
gacagctacacatctttctttggaatccctctccagtgcattgcacaagatgaaaatttg
aatgtcccttcgactgtaatggaggccatgtccagacaagacaccctacagccatttaat
aaaagtagcaaactatcccctgccactccacagcgatctgtagtatttccacagactccg
tgcagcagaaatttttctctcctggataagtctgggtccatcgagtcaggatttaaccag
atcagtgtcaaaaaccaacgagttcttgcaagcccaacttcaacaagccaactaaattct
gagttcagtgactggcatctttggaaatgtgggcaatgctttaagactttcacccagcgg
atcctcttacagatgcatgtgtgtacgcagaaccccgacaggccctaccagtgtggtcac
tgctcccagtccttctcccagccctcggagctgaggaaccacgtcgtcacacactccagt
gacagacctttcaagtgcggttactgcggccgagcctttgctggtgctacaacgctcaac
aatcacatccggacgcacactggggaaaagcccttcaagtgcgagaggtgtgagaggagc
ttcacacaagccacccagctgagtcgacaccagaggatgcccaatgagtgcaagccaata
acagagagcacagaatcaattgaagtggattaa
DBGET
integrated database retrieval system
