Lagopus muta (rock ptarmigan): 125689490
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Entry
125689490 CDS
T09141
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
125689490 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lmut03021
]
125689490 (POLR1B)
Enzymes [BR:
lmut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
125689490 (POLR1B)
Transcription machinery [BR:
lmut03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
125689490 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
PBP_GOBP
Motif
Other DBs
NCBI-GeneID:
125689490
NCBI-ProteinID:
XP_048792652
LinkDB
All DBs
Position
2:complement(94263394..94278959)
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AA seq
1127 aa
AA seq
DB search
MAAAMGESTSRESHRLRRRQRPRGGVRRDLPAAHIESFNYAISEGVYRALQDIPPVELAL
KDDRVALTVVGIAISPPVVPKGTLCQEVKVFPAECRGLRSTYRGRLTVDISWSLNGIPQG
TIKQPVGYIPIMVKSKLCNLYNLSPQELIQHHEEEEEMGGYFIINGLEKVIRMLIMPRRN
FPLAMTRHKWKNRGPGFTEYGVVLHCVKDEHSAINMNLHYLENGCVMVNFIFQKELFFLP
LGFALKALVNFTDYQIFEELVKDKKNDTFYVNCVTEMLRAVAEAGCYTQQNVLEYLGKSF
RVKLNLPEWYSNEQAADFIFNKCICIHLTDRTEKFYLLCMMTRKLYAFAKGECMEDNPDS
LMNQEVLTAGQLFLMFLKERLENWLQSVKFILEKRTEKADINVNTDSLMKAFSLTTDVTK
SFEYLLATGNLRSKTGLGMLQDSGLCVVGDKLNFVRYLSHFRCIHRGSAFAQMRTTTVRK
LLPESWGFLCPVDTPDGEPCGLMNHMTAVCEIVTEMVPVTDLPPLLCALGVVPIDATPSK
PYAECYRVVLDGAVVGWVEWDLAPQVAEALRRFKITQEKRFPARAEVVLIPMTGKPSLYP
GLFIFTTPCRMVRPVKNLLYGRKEWIGTLEQVFMNVATMESDIVPGVTTHQELFPHSILS
VVANLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYRDRSDNKLYLLHTPQSPLVRPRMYD
YYGMDSYPVGTNSVVAVISYSGYDMEDAMIVNKSSWERGFAYGSVIKMESIDLSLKASRG
GDNLVFGIRPGDPNIKEKLDADGLPFVGSILQPGDPFYSYMNLNTGETFTVYYQNKEVGI
VDNIKLCSNDRGTGKFKKACITVRVPRNPTVGDKFASRHGQKGILSQLWPVEDMPFTENG
MVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGAYYDATPFTFTEKNSALKYFGETLVS
AGYNFFGTEKMYSGISGVELEADIFVGVVYYQRLRHMVSDKFQVRTTGPRDSVTNQPVKG
RNVEGGIRFGEMERDALLAHGTSFLLHDRLFSCSDGSEAYVCTSCGSMLSPLLQRPPPSS
VASNRRYSCMLCGRMDTIQVIPVPHVFRYFLAELAAMNIKLRLTLEQ
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccatgggggagagcacgtctcgggagtcgcaccgcttgcgacggcggcag
cggccccgcggcggggtacggcgcgacctgcccgccgcccacatcgagtccttcaactac
gccatcagcgagggggtgtaccgcgccctgcaggacattccgccggtggagctggcgctg
aaggacgaccgcgtggcgctcaccgtggtggggatcgccatctcgccgcccgtggtgccc
aaggggacgctgtgccaggaggtgaaggtgttcccggccgagtgccgcgggctgcgcagc
acctaccgcggccggctcacggttgacatcagctggtcactgaatggcattccacaaggg
actattaaacagcctgtagggtatattccaatcatggtgaagtccaaattgtgtaacctc
tataatctttctccccaagagctcatccagcaccatgaggaggaggaggaaatggggggc
tacttcataattaatggcttagagaaagtaattagaatgctgattatgcccaggcgcaat
ttccctcttgcgatgacaagacacaagtggaaaaacagaggtcctggtttcacagagtac
ggggtagtgctgcactgtgttaaagatgagcacagtgcaataaacatgaaccttcactac
ctggaaaacggctgcgtaatggtgaacttcatttttcagaaagaactgttcttccttccc
ttgggatttgctctaaaggcattagttaatttcacagactaccagatttttgaagagctg
gtcaaagacaagaaaaacgacaccttttatgtgaactgcgttactgagatgctaagagca
gtagctgaagcaggttgttacacacagcaaaacgtcctcgaataccttggaaagagcttc
agagtaaaactcaaccttcctgagtggtacagcaatgaacaggctgcagatttcattttc
aacaagtgtatctgcatacacttgacagacagaactgaaaaattctacctgctttgtatg
atgacccggaagctgtatgcttttgccaaaggggagtgcatggaggataatccagacagt
ctgatgaatcaagaagtgcttactgcaggacagcttttccttatgttcctaaaggagagg
cttgagaactggttgcaatctgttaaattcattttggagaagagaacagaaaaggccgac
atcaacgtcaatacagacagcctgatgaaggcattcagcctgaccacagatgttaccaag
tcatttgagtaccttcttgcaactggtaacctgcgatctaagaccggcctgggcatgctg
caggacagcgggctgtgtgtggtgggggacaagctgaattttgttcgctacctttcgcat
ttccgctgcatacacagagggtcggcgtttgcccagatgagaactaccacggtacgcaaa
ctgctgccagagtcctgggggttcctgtgcccagtggacacccccgatggagagccctgc
ggtctgatgaaccacatgacagctgtgtgtgaaatagtgacagagatggttcctgtgaca
gacctgccacctctgttatgtgctctaggtgttgtccccattgatgcgaccccaagcaag
ccgtacgctgagtgctaccgcgtggtgctggacggtgcagtggtgggctgggtcgagtgg
gacctggctcctcaggttgcagaagccctccggcgattcaagataacacaagagaagaga
tttcctgcacgggcagaagtggtccttatcccaatgacaggaaaacccagtctgtatcct
ggcttgttcatcttcactaccccttgtcgaatggtgcggcctgtcaaaaacctgctgtat
ggaaggaaggaatggattggtactctggaacaggtcttcatgaatgtggccaccatggag
tcagacattgtgcctggagtcaccacccaccaggagctcttccctcacagcattctgagt
gtggtggccaacctcatccccttctctgaccacaaccaaagtcctcgaaacatgtaccag
tgccagatgggaaagcaaaccatggggtttccagtgtataactacagggaccgctcagat
aacaagttgtacctcctccacacccctcagagccctctggtgaggcccagaatgtatgac
tattatggtatggacagctacccagtcggtaccaattcagttgtggctgttatctcctat
agtggctatgacatggaagatgcaatgattgtgaacaaatcttcttgggagagagggttt
gcttatggaagtgttatcaagatggagagcattgacctttcccttaaagctagcagggga
ggtgataatttagtgtttggtatcaggcctggggacccaaacattaaggagaagttggat
gctgatggactgccttttgttggctccatcctgcagcccggggacccgttctacagctac
atgaaccttaacacaggggagaccttcactgtgtactaccagaataaagaagtcggcatt
gtggacaacatcaagctgtgcagtaatgaccgtggcactgggaaattcaagaaggcttgc
atcactgtgagagttcctcgaaacccaactgttggagacaaatttgccagccgccacggg
cagaagggcatcctgagccagctctggcctgttgaagacatgccgttcacggagaatggg
atggttccagacatcctcttcaacccccatgggttcccctcccgtatgaccatcgggatg
ttaattgagagcatggcggggaagtcagcagcactgcacggcgcctactacgatgccact
cctttcaccttcacggagaaaaactccgccttgaagtactttggtgagactttggtgagc
gcgggctataacttctttgggacagaaaagatgtacagcggaatcagcggcgtggagctg
gaggcagacatctttgtgggagtcgtgtactaccagcgcctgcgccacatggtctcagac
aagttccaggtgaggactacaggaccccgggattccgtcaccaaccagcccgtcaagggg
aggaacgtggaaggggggattcgctttggtgagatggagcgtgatgcgctgttggctcat
ggcacctccttcctgctgcacgaccgcctgttcagctgctctgatggctcggaagcctat
gtttgcacgagctgcggcagcatgttatctcctctgctccagcgcccaccaccttcctct
gtagcaagcaacaggaggtattcctgcatgctctgtggcaggatggacaccatccaggtc
atccccgtgccccacgtcttccggtacttcttggcagagctggcagccatgaacatcaag
ctaaggctcacgctggagcagtaa
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