Lagopus muta (rock ptarmigan): 125690290
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Entry
125690290 CDS
T09141
Symbol
HDAC10
Name
(RefSeq) polyamine deacetylase HDAC10 isoform X1
KO
K18671
histone deacetylase 10 [EC:
3.5.1.98
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125690290 (HDAC10)
Enzymes [BR:
lmut01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
125690290 (HDAC10)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
125690290 (HDAC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
VPS51_Exo84_N
Motif
Other DBs
NCBI-GeneID:
125690290
NCBI-ProteinID:
XP_048794442
LinkDB
All DBs
Position
1:complement(19919495..19935691)
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AA seq
681 aa
AA seq
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MASGTALIYDEAMTRHKLLWNDPICDIEVPERLSASYEQLQCYHLVERCIPVPAREGSEE
EILLVHSSQHLEAAKSTQTMNEEELKRISGNYDSFFFHPSTYHCARLAVGAALQLVDSVM
SGKVCNGMALVRPPGHHSQRNAANGFCLFNNVAIAAEYAKLKYHLQRILIVDWDVHHGQG
TQYIFEEDPSVLYFSWHRYEHQEFWPSLKESDYDAVGLGKGKGFNINLPWNKVGMGNSDY
LAAFFHVLLPTAFEFDPELVLVSSGYDSGIGDPEGQMNATPEVFAHLTHFLMQLAHGKLC
VILEGGYHLRSLSESVCMTVRTLLRDPLPQVTGEMAPCLSAIESIQNVRAAHKPYWKWLT
YEDTSFLHNLSTKSDLLKTADTNPCTDGEAKIADSNGTDRIERFLELHMKNIVFPIPPIK
TATTAELNASADPNTFPVHLHVVKEMDKNELEALVSDFYADLVEANKTLLSLGSALTILD
KILKKEVCNGIAESPAASASVAVALRHSLRFGFQRVLCIFVGDMDIVPSTEDGKLLIIHV
CKKEQTGKSSSKHYIVLNWKEDADRNDFFSAVLGFILPVAYSYQPNLIVIAVGPNRSLGI
SGISLIIGLLQGLAESRILAVIEDTDINLMQSVAKALAGASMPNFGAHVPPTQEKVNQIK
KLRNQLQQDWKMLQCSVNDGI
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaggaacagccctgatttacgatgaggcgatgaccaggcataagctgctttgg
aacgatcctatttgtgatattgaagtgccagaaagactgtcggcctcctatgagcagctt
caatgttaccatcttgtggaaagatgcatccctgtgcctgctagagaaggaagcgaggag
gaaatcctcttagttcacagttcacaacacttggaggctgcaaaaagcacacagacaatg
aatgaagaggaactgaaaagaatctctggaaattatgattcttttttctttcatccgagc
acttaccactgtgccagactcgctgtaggagcagctttgcagctagtggactctgtgatg
tcaggaaaagtgtgcaatggaatggcattagtaagacctccaggtcaccacagtcagaga
aatgcagctaatgggttctgtttgttcaacaacgttgctattgcagcagaatatgcaaaa
ctgaaatatcacctacagagaatcctaattgttgactgggatgtgcaccatgggcaagga
actcagtatatatttgaagaagatccaagtgttttgtatttctcctggcatcgctacgaa
catcaggaattctggccatcgctcaaagaatctgattatgatgctgtgggtttgggaaaa
ggaaaaggttttaatataaatttaccttggaataaggttgggatgggaaattcagattat
cttgctgccttttttcatgtgttacttccaacggcttttgagtttgatcctgaactggtt
cttgtctcctctggatatgattcaggaattggagaccctgagggtcagatgaatgccact
cctgaagtctttgcccaccttacccatttcctgatgcagttggcccatgggaagctgtgt
gtcatcctggagggtgggtaccatctgaggtccttgtctgaatccgtctgcatgactgta
agaactttgctaagagatcctctgcctcaggtaactggagaaatggcaccttgcctaagt
gctattgaatctattcaaaatgtgagagcagcacataaaccctactggaaatggttgacg
tatgaagacacatcgtttttgcacaatttgagcaccaaatcagacttactaaagactgca
gatacaaatccctgtacagatggtgaagctaagatagctgacagcaatggaactgacaga
atagaaagatttttggagctgcacatgaaaaatattgtatttccaattcctcccatcaaa
acagcaacaacagctgagttgaatgcttcagcagacccaaacaccttcccagtacacctt
catgttgtgaaggaaatggacaaaaatgaactagaagctcttgtcagtgatttttatgcg
gaccttgtggaagcaaacaaaactttgctctctcttggcagtgctttgaccatcctagat
aaaatacttaagaaagaggtatgcaatggaattgcagaatcacctgcagcttctgcttct
gttgctgttgcactgagacattctcttcgttttgggtttcaaagagtgctttgcatcttt
gttggagatatggatatcgtaccgagcacagaagatggaaaactactcatcatacatgtt
tgcaagaaagaacagactggaaagagcagctctaaacactacattgtgctaaactggaaa
gaggatgctgacaggaatgacttcttttctgctgtgcttggattcattctccctgtagca
tacagttaccaacccaacttgatagtaatagctgttggaccaaacaggagccttggaata
agtgggatttctcttattattggtttgctacaaggactggcagaatctcgaattcttgca
gtgattgaggacacagacataaatctaatgcaaagtgtagccaaagcacttgcaggtgct
tctatgccaaattttggagctcatgtgcctcctacccaagaaaaagtaaatcaaataaaa
aaactaagaaaccagcttcagcaggactggaaaatgcttcaatgctcagtgaacgatgga
atttaa
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