Lagopus muta (rock ptarmigan): 125692371
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Entry
125692371 CDS
T09141
Symbol
GRIN2B
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2B isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04020
Calcium signaling pathway
lmut04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
125692371 (GRIN2B)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
125692371 (GRIN2B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmut04040
]
125692371 (GRIN2B)
Ion channels [BR:
lmut04040
]
Ligand-gated channels
Glutamate (ionotropic)
125692371 (GRIN2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
125692371
NCBI-ProteinID:
XP_048798751
LinkDB
All DBs
Position
1:complement(47688687..47916176)
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AA seq
1503 aa
AA seq
DB search
MRPRVECYSPRFWLVLAVLATTGSGTHAQKSHPSIGIAVILVGTSDEVAIKDAHEKDDFH
HLSVVPRVELVAMNETDPKSIITRICDLMSDRKIQGVVFADDTDQEAIAQILDFISAQTL
TPILGIHGGSSMIMADKDESSMFFQFGPSIEQQASVMLNIMEEYDWYIFSIVTTYFPGYQ
DFVNKIRSTIEHSFVGWELEEVLLLDMSLDDGDSKIQNQLKKLQSPVILLYCTKEEATYI
FEVANSVGLTGYGYTWIVPSLVAGDTDTVPSEFPTGLISVSYDEWDYGLPARVRDGIAII
TTAASDMLSEHSFIPEPKSSCYNTQEKRIYQSNMLNRYLINVTFEGRNLSFSEDGYQMHP
KLVIILLTKERKWERVGKWKEKKLQMKYYVWPRFELYPDSEEREDDHLSIVTLEEAPFVI
VENVDPLSGTCMRNTVPCQKRIVTENKTDEEPDYMKKCCKGFCIDILKKISKSVKFTYDL
YLVTNGKHGKKINGTWNGMIGEVVTKRAYMAVGSLTINEERSEVVDFSVPFIETGISVMV
SRSNGTVSPSAFLEPFSADVWVMMFVMLLIISAVAVFVFEYFSPVGYNRCLADGREPGGP
SFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEE
YVDQVSGLSDKKFQKPNDFSPPFRFGTVPNGSTERNIRNNYPEMHSYMVKFNQRGVDDAL
FSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGKVFASTGYGIAIQKDSGWKRQVDL
AILQLFGDGEMEELEALWLTGICHNEKNEVMSSQLDIDNMAGVFYMLGAAMALSLITFIC
EHLFYWQFRHCFMGVCSGKPGVVFSISRGIYSCIHGVAIEERQSAMNSPTATMNNTHSNI
LRLLRTAKNMANLSGVNGSPQSALDFIRRESSVYDISEHRRSFTHSDCKSYNNPPCEENL
FSDYISEVERTFGNLQLKDSNVYQDHYHHHHRPHSIGSTSSIDGLYDCDNPPFNAQSRSI
GKKPLDLGLPPAKHSQLGDLYGKFSFKSDRYGGSGAHDDLIRSDVSDISTHTVTYGNIEG
NAAKRRKQQYKDSLKKRPASAKSRREFDEIELAYRRRPPRSPDHKRYFRDKEGLRDFYLD
QFRAKENSPHWEHVDLTDIYKERGDEFKRDTGGGGSGSCTNRAHHKHGSGEFGGSNEHKH
GVVSGVPAPWEKNLTNLDWEDRSGANFCRSCPSKVHNYTPSVVGQNSTRQACIRCEACKK
AGNLYDISEDNSLQELDQPPAPVPVATSATSSSKYPQSPSNSASKVQKKNRNKLRRQHSY
DTFVDLQKDDSALAPRSVSLKDKGRFLEGSPYAHMFEMPASETTFANNKSSVPATSYHHH
NNPGSSGGYMLSKSLYPDRVTQNPFIPTFGDDQCLLHGSKSYFFRQPVVAGGPKARPDFR
AIVTTNKPVVSALHGAVPARFQKDICIGNQSNPCVPNNKNPRAFNGSSNGHVYEKLSSIE
SDV
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccagggtggagtgctactctccgaggttttggctggtgctggcagtcctcgca
acaacagggagcgggacccacgcgcaaaaaagccacccaagcattggcattgcggtcatc
ctggtggggacctcagatgaagtggccatcaaagatgcccacgagaaagatgacttccac
cacctctcagtggtgccccgggtggagctggtggccatgaatgaaactgatcccaagagc
atcatcacccgcatctgtgacctcatgtcagaccggaagattcaaggggtggtatttgct
gatgacacggaccaggaagccattgcccagatcctggacttcatctctgcccagaccctc
actcccatcctgggcatccatggaggctcctctatgatcatggcagataaggatgagtca
tccatgttcttccagtttggcccatcaatagaacagcaagcttcagtcatgctcaacatc
atggaagaatatgactggtacatcttctccattgtcactacttactttcctggttaccag
gactttgtgaacaagatccgcagtaccattgagcacagctttgtgggttgggaactggag
gaggtccttctgttggacatgtccctggatgatggagactcaaagatccagaaccagctc
aagaagctccaaagccctgttatcctcctctactgcaccaaggaagaggccacctacatt
tttgaggtggccaactctgtgggtctgacaggctatggttacacgtggatcgtgcccagc
ctggtggcaggggatacagacacagtgccatctgagttccccaccgggctcatctctgtc
tcatatgatgaatgggactacggtcttcctgctagagtgagggacggaatagccataatc
accacggctgcttctgatatgctgtctgaacacagcttcatccctgagcccaaaagcagc
tgttacaacacccaggagaaaaggatttaccagtccaacatgctcaacaggtacctgatt
aacgtcaccttcgaaggcaggaatttgtcattcagtgaggacggataccagatgcatccc
aagctggtgatcatccttctgaccaaggagaggaagtgggagagggtggggaaatggaag
gaaaagaaattgcagatgaagtactacgtgtggccccgctttgagctttatcctgactct
gaggagcgtgaggatgatcacctgagtatagtgactctggaagaggcaccgtttgtcatt
gtggagaatgtggaccccctaagtggcacctgcatgaggaacacagtcccttgccaaaaa
cgcattgtgactgagaataaaactgatgaagagccggattatatgaagaagtgttgtaag
gggttctgcatcgacatcctcaagaaaatctcaaagtctgtcaagttcacctatgacctc
tacttggtgactaatggcaagcatgggaaaaagatcaatgggacgtggaatggaatgatt
ggagaggtcgtcaccaagcgggcctatatggctgtgggatccctcacaattaacgaggaa
agatcagaagtagtggatttctctgtgcccttcattgagacgggaatcagcgtcatggtg
tcacgtagcaatggaactgtctcaccttctgccttcttagagccattcagtgctgacgta
tgggtgatgatgtttgtgatgctgcttatcatctctgcagtggctgtctttgtcttcgag
tacttcagccctgtgggctataatcggtgccttgctgatggcagagagccaggaggtccc
tctttcaccattggcaaagctatctggttgctgtgggggctggtgttcaacaactctgtg
ccagtgcagaatcccaaaggtaccactagcaagatcatggtgtcagtgtgggccttcttt
gctgtcatcttcctggccagctacactgccaatctggctgccttcatgatccaagaggaa
tatgttgaccaggtgtccggcttgagcgacaaaaagttccagaaacccaatgatttctca
ccccctttccgctttgggacagttcccaatggcagcacagaaaggaacattcgcaacaac
taccctgaaatgcacagctacatggtgaagttcaatcagaggggagtggatgatgcccta
ttctcattgaagactgggaagttggatgctttcatttatgatgcagcagtgctgaattac
atggctggcagagatgaaggctgcaaactggtgacaattgggagtgggaaagtgttcgcc
tccactggctatggaattgccatacagaaggactcaggttggaagcgccaggttgatctt
gctattctacagctttttggagatggggagatggaggagctggaagcactgtggctcact
ggcatttgtcacaatgagaagaatgaggttatgagcagccagttggatatagataacatg
gcaggtgtcttctacatgctgggagcagctatggccctcagtctcatcaccttcatctgt
gaacatctcttctactggcagttccgccactgcttcatgggtgtctgctctggcaagcct
ggcgtggttttctccatcagtaggggtatctacagctgcattcatggtgtggccattgag
gaacgccagtcagcaatgaactcccccacagcgactatgaacaacacccattccaacatc
ctccgcctgcttcggacagccaagaacatggccaacctatcaggggtcaatggctcacca
cagagtgccctggacttcatccgccgcgaatcatcagtttatgatatttctgaacaccgc
cgcagcttcacccactcagactgcaagtcctacaacaaccccccatgtgaggagaatcta
tttagtgactacattagtgaggtggagaggacctttggcaacctacagttgaaggacagc
aatgtatatcaggaccactaccaccaccaccaccgtccccacagcatcggaagcaccagc
tccatcgatgggctctacgactgtgacaacccacctttcaacgcccagtcacgatccatc
gggaagaagcccttggatctggggttgccccctgccaagcacagccagctgggtgacctc
tatggcaagttctccttcaagagcgaccgctatgggggcagtggggcccacgatgacctg
atccgctcagacgtctctgacatttccactcacacggtcacctacggcaacattgaaggc
aacgcagctaagcggcggaagcagcagtacaaggacagcctgaagaagcgtccagcctct
gccaagtcccggcgggagttcgatgagatagagttggcttaccgccggcgtccaccccgc
tcgcctgaccacaaacgctacttcagggacaaggaagggctacgggacttctacctggac
cagtttcgggccaaggaaaactcaccacactgggagcatgtggacctgacggatatctac
aaagagcgtggagatgagtttaagcgggacacgggaggaggaggaagtggatcctgcaca
aacagagcccaccataagcacggttcgggtgagtttggcggaagcaatgagcacaagcat
ggtgttgtgagcggggtcccagcaccctgggagaagaatctgaccaacctagactgggag
gaccggtctggggctaatttctgccgcagctgcccttctaaggtgcacaactacactcca
tcggtggtggggcagaattccactcgccaggcctgcatccggtgtgaggcctgcaagaaa
gcaggcaacctgtatgacatcagtgaggacaactctctccaagagctggaccagccacct
gcccctgtgcccgtggccaccagtgccacctcctcctccaaatatcctcagagcccttcc
aattctgcctccaaggtgcagaagaagaaccgtaacaagctccgccggcaacactcctat
gacacctttgtggacctgcaaaaggatgactcggccctggcccctcgcagcgtcagcctc
aaggacaagggtcgctttttggaggggagcccctacgcccacatgtttgagatgccagcc
agtgagaccacctttgccaacaacaagtcctcagtgcccgccaccagctaccaccaccac
aacaaccctggcagcagcgggggatacatgctcagcaagtcgctctaccctgacagggtc
acccaaaaccctttcatccccacttttggggatgaccaatgcttgctccacggcagcaaa
tcttatttcttcaggcagcctgtggtggcaggagggcccaaagccaggccagacttccga
gccatcgtcaccaccaacaagccggtggtctcagcccttcatggggctgtgccagcccgt
ttccagaaggacatctgtatagggaaccagtccaacccctgtgtgcctaacaacaaaaac
cccagggctttcaatggctccagcaacgggcatgtttatgagaaactctccagtattgag
tctgacgtttga
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integrated database retrieval system
