Lagopus muta (rock ptarmigan): 125698229
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Entry
125698229 CDS
T09141
Symbol
SPATA5L1
Name
(RefSeq) spermatogenesis-associated protein 5-like protein 1
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lmut03009
]
125698229 (SPATA5L1)
Enzymes [BR:
lmut01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
125698229 (SPATA5L1)
Ribosome biogenesis [BR:
lmut03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
125698229 (SPATA5L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_14
AAA_22
TIP49
AAA_33
Rad17
DUF815
Vps4_C
AAA_2
AAA_7
RNA_helicase
DUF6497
ABC_tran
TsaE
bpMoxR
NACHT
NTPase_1
AAA_28
AAA_3
nSTAND3
AAA_18
IstB_IS21
Mg_chelatase
AAA_17
Motif
Other DBs
NCBI-GeneID:
125698229
NCBI-ProteinID:
XP_048812236
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All DBs
Position
10:complement(9723162..9731262)
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AA seq
867 aa
AA seq
DB search
MIKREAVRRTNSPVLKCIPACPVRRGSQFCGGGLKWSLRFFADELLQLTQTHPPVEHALH
PAKPSASRPHGKQAGTCEGRRSPTACACSRRRRGKRCGLRSAGAGGVPRVSEQRAAMEPA
PLKLLPPDPGDEGTQRCRLGPAALSSLGVRLGAPLRISLPAGCYLCTAWPRPDLADGYVQ
ADPACSTGLTAAAPRGLTLSPGCLQPLSSRRLRGAAVRAVLRGGARGRPAGLQEAVRDLL
THVYVSPRYVVTVGPRVRAPVVHVEILSVDPATEEAGLITPQTNVTITEVMTLERYRLLT
EDTAEIPVAGLDDVGESLKEMVDLPFRFPRTFKKLGLSVPNGVLLVGPPGVGKTLLVKAV
AKEVGAYLLCVSGPALYGSRPGESEENLRSVFEKGREMSCEGPTVLFIDEIDALCPKRRS
SSSAPEDRLVAQLLTLLDGAGAGKDRMVVVAATNRPDALDPALRRPGRFDREVIIGTPTL
TQRRSILQMLTCGMPISTDVDLVKLAEMTTGYVGADLTALCREAAMQAVFHSSLDSAEVL
INMTDFQEAFKKIQPSSFRGAVGLKECKPITWEQIGGLEDVKLKLKQSVEWPMKFPQAFV
RMGLARPKGVLLYGPSGCAKTTLVKAVATSCHCSFLSVSGAELFSPYVGDSEKILSQVFR
QARANSSAIIFLDEIDSILGSRSRGKTGRGVSERVLSVLLNELDGVGLKVTERRGNKLQL
EGRCEELSDEERQLEFQETLSRDVMVVAATNRPDMLDDALLRPGRLDRVIYIPPPDLKGR
LSILKVCTEKIPLDTDVSLQDIAALTDLFSGADIENLCKEAALLALQENGLEATAVKQEH
FVKSLETVKPSLSMKDVEFYEEFIVKN
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgataaagcgggaagccgtcagaaggacgaacagcccggtcctgaagtgcatccctgcc
tgccccgtgagacggggatcccagttctgtggggggggtctcaagtggagtctcaggttt
tttgcggatgagttgctacagctgacgcaaacccaccctccggtggaacacgcactccac
ccagcgaagccaagcgcctccaggcctcacgggaagcaggcgggaacgtgtgaggggagg
cggagccccaccgcgtgcgcgtgctcgcggcgcaggcgcgggaagcggtgcggactgcga
tccgcgggggcaggcggagtgccgcgggtgagcgagcagcgcgccgccatggaaccggcg
cccctcaagcttctacccccggaccccggggacgaaggcacgcagcggtgcaggctgggc
cccgccgccctctcctccctgggggtccggctgggcgctccgttgcggatctccctgccc
gccggctgctatctgtgcacggcgtggccgcggccggacctggcggacgggtacgtgcag
gcggacccggcctgcagcaccgggctgacggcggcggccccgcgcgggctgacgctgagc
cccggctgcctgcagccgctgtcttcccgccgcctgcggggggcggccgtgcgcgcggtg
ctgcggggcggcgcgcgcgggcggcctgcggggctgcaggaggcggtccgcgatctgctg
acccacgtctacgtttcccctcgctacgtcgttactgttggccctcgtgtccgcgctccc
gtggtgcacgtggaaattctctccgtagaccccgcgacggaggaagccgggctgataacc
ccccagacgaacgtgacgattacggaggtgatgactttagaacggtacaggctcttaacg
gaggacacggcagaaattcccgtggcggggctggacgatgtgggagagtctctgaaggag
atggtcgacctgccgttccgtttcccgaggacgtttaagaagctggggctttccgtcccc
aacggggtgctgctggtcggccctccgggggtggggaagacgctcctggtgaaggcagtg
gcgaaggaggtgggcgcgtatctgctgtgcgtcagcggccccgcgctgtacggctccagg
ccgggggaaagcgaggagaatttgcgaagcgtctttgaaaagggcagggagatgtcctgt
gagggcccgaccgtgctctttattgatgagatcgatgctttgtgcccgaaacgacggagc
tccagcagcgctcctgaggatcgcctggttgctcagttgctgacgctgctggacggtgct
ggtgctggtaaggataggatggtggttgtggcagcgacaaacaggcctgacgccttggat
cctgcgctgagaaggccaggcaggtttgacagagaagttattattgggacgccaacgctt
acgcagaggagatccatcctgcagatgctcacctgtggtatgcccatttctacagacgtt
gatttggttaagctggcagaaatgacaactgggtatgttggagctgaccttacagcgctc
tgcagagaagctgctatgcaggctgtgttccacagctctttggattcagctgaagtgcta
attaacatgacagatttccaagaagcttttaaaaaaattcagccatcctctttccgaggt
gcagttggactcaaagagtgtaaacccatcacttgggagcagattggtggtcttgaagat
gtgaagttgaagttaaaacagagtgtggagtggcccatgaaatttcctcaggcatttgtg
aggatggggctggctcgtccaaagggtgttcttctctatgggccatcagggtgtgccaaa
accacactggtgaaggctgtggccacaagttgccactgttcctttctctctgtaagtggt
gctgagctgttctcaccttatgttggagattcagagaagattttatctcaggttttccgc
caagcgagagcaaattcttcagcaataatcttcctggatgaaattgattctatcctggga
tctcgatcgcgcggtaaaactggccgtggtgtctcagagcgggtgctgtctgtgcttctc
aatgagttggatggtgttggactgaaagtcacagaaagaagagggaataaactgcagctt
gaggggagatgtgaggaactaagtgatgaggaaagacagctggagtttcaggaaactttg
agcagagatgtcatggtagttgctgcaacaaataggccagatatgttggatgatgcctta
ctgcgccctggaaggttagacagagtgatctatattccacctccagatctaaagggaagg
ctttccattttgaaagtctgcacagagaaaattccattagatactgacgtgtcactgcag
gatatagcagccctaacagacctcttctctggagctgatattgaaaatctgtgcaaggag
gctgccttgctggcattgcaggagaatggactcgaagcaactgctgtaaaacaggaacat
tttgtgaaatcactggagactgtcaagccgtctttaagcatgaaagacgtggaattttat
gaagaatttatagtcaagaattaa
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