Lagopus muta (rock ptarmigan): 125698605
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Entry
125698605 CDS
T09141
Name
(RefSeq) laminin subunit beta-4-like isoform X1
KO
K06243
laminin, beta 2
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04510
Focal adhesion
lmut04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125698605
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125698605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Laminin_I
Tropomyosin
F5_F8_type_C
Sec10_N
Nup49_C
Motif
Other DBs
NCBI-GeneID:
125698605
NCBI-ProteinID:
XP_048813097
LinkDB
All DBs
Position
11:11487055..11502845
Genome browser
AA seq
1827 aa
AA seq
DB search
MDVLVLALLLAGVPAAGGWEEPDPSQGCARGSCYPATGNLLVGRARQLSASSTCGLQGPQ
EYCIVSHLQDSEKCFTCDSRNPALRESHRIENVIYLHGPHSERSWWQSENGVEHVSIQLD
LEGEFHFTHLIMKFKTFRPAAMLVERSADFGRSWKTYRYFAYNCSKLFPRIPTHSSGHIG
EVLCEQRYSEIEPSSHGEVIFKVLDPSIPVVDPYSPSIQELLRVTNLRVNLTKLHTLGDN
LLDSRQEVLHKYYYAVDELVMRGSCFCHGHAAECAPAPGAPPSVPGMIHGRCVCKHHTQG
LNCERCEDFYHELPWRPAEGSSTNACRRCDCNEHSRRCHFDMAVFLATGNTSGAVCDGCQ
HNTMGRHCHLCKPFYYRHPRSDIRAPTACIPCDCDPAGSLDGGACDAHTDVALGMIAGQC
RCKENVAGPRCDRCRHGAYGLSQGDPQGCQPCRCDPRGTVAGSSPCDPISGDCYCKRFVA
GRSCSQCVPEFWGLSYDVGGCRPCSCDFGGAYSNRCSMEDGACPCRPHLMGRQCDQVQPG
FFCAPLDHYTYEAEQAVGHGPSHPQLPGAVRAEVPQDCPQHRSGDAAGRKARARPQRSPP
RSPQPRAAPRHSLQQPPKPDVEPVLRDGDGRMVTWTGLGFARVRDGAGLTFHVDNVPYPM
EYELLLRYEPESAEDWEAVVSISSKVLPTGPRCGNLLPSEQMYHEGLPHSQRYVLLSRPF
CFEPSTPYEVTVRLQRASVTQRHPSAFILIDSLVLLPRVPELPGFHGAAVEAVQRLEELE
RYRCLEAFHMAPPHTLAEACARLICSVSAVLHDGALPCQCDPQGSRSSVCQVLSGQCECK
PHVLGRRCDRCAPGSYGFGPLGCSPCACSPEGSVSQLCDAGSGQCRCQPGVMGRQCDRCQ
PGHWGFPICRPCQCNGHTEECDLRTGSCLRCRDHTAGRHCERCQDGYYGDPVLGSGQQCR
PCPCPGYPGTRHYHGSACHADEETHHIVCLCAPGYTGPRCDRCSPGYFGTPEMEGGVCRP
CQCNNNIDTSDPGACDPHTGHCRRCLYHTAGPRCAQCQPGYFGNALQRSCRRCSCDPRGT
LSAHCTAGTCSCDRATGACACRANVVGRSCDRCAPNFWNLGGTEGCQPCGCHAMHATHPA
CDEVTGQCRCHLGFGGRVCSQCQENHWGDPELQCRACECEPLGAESPQCDRASGQCQCRP
GFGGLRCDRCQRGYQAAFPRCSPCHPCFGHWDAVLGSLQDGLQHLGARVRALREGGSAAP
LSPRLRALEEALKHAERLLGEGSSPSSPLLQELAGQLDGSRTELDNFWKRLQELEQHVDQ
LEQADVLHHSRLARLSHELGGLNQTTSHLQAVLGTVTAAGFRESYQSIVMAARDSRQAEV
VANGTAGELRAAQAMQWAAEQALQQRGDAFRRSMAAQRKSLRETQKRVSGLSVAGINEKI
CGAPGDRSCAESLCGGALCRDSVGMRHCGGVGCTGALPVSAQALSSARNASQQLEVALGQ
LSAVAQKMQEVQDLARGARSRAEEALERSQAARSRTEKATAQLRDFIRRIKAFLSEEGAD
PGSIELVARHVLNISLPSSPAHIQELLREMQESISQLDGVDAVLNGTAQGLEAAQGLLAQ
GQDARERAEGMRDELAGTQLALQVARAQVMAAGSTLRRAKDGIRAAEGKAREAERRLQAL
QGKESRLQRRLRELAQRVTALQQRGQDARRLAQDAKDGAQRATAASRTLSQDLAQVTRRY
VVLKDRVSGMAGMAGGALQRVTRLTAEARDLLDKANSSKKRLEELEQHFGANEQAMAAKA
TRLQALERQVSGLLQEIRERANAYATC
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcctggtcctcgctctcctcctggcgggggtgccagcagcagggggctgggag
gagccagatccatcccagggctgtgcccgtggcagctgctacccggccaccggcaacctg
ctggtggggagagctcggcagctcagcgcctcgtccacctgcgggctgcaggggccccag
gagtactgcatcgtcagccatctccaggactctgagaaatgcttcacctgtgactcacga
aacccagccctgcgtgagagccaccgcatcgagaacgtcatctacctgcacggcccgcac
agcgagaggagctggtggcagtcggagaatggtgtggagcacgtcagcatccagctggac
ctggaaggcgagttccacttcacacacctcatcatgaagttcaagaccttccgccccgca
gccatgctggtggagcgctcggccgactttggccgcagctggaagacgtaccgctacttc
gcctacaactgctccaagctcttcccccgcatccccacacattcctcggggcacataggc
gaggtgctgtgtgagcagcgctactctgagatcgagccctccagccacggcgaggtcatc
ttcaaggtgctggatccctccatcccagtggtggacccatacagtcccagcatccaggag
cttctgcgtgtcaccaacctgcgggtgaacctcaccaagctgcacacactgggggacaac
ctgctcgactcacggcaggaagtgctgcacaaatactactatgctgtggatgagctggtg
atgcgtgggagctgcttctgccacggccacgctgctgagtgtgcccctgcacctggtgct
ccaccatctgtccctggcatgatccacgggcgctgtgtctgcaagcaccacacgcagggg
ctgaactgtgagcgctgcgaggacttctaccacgagctgccctggcgcccggctgagggc
tccagcaccaacgcctgccgccggtgcgactgcaacgagcactcacggcgctgccacttc
gacatggccgtgttcctggccaccgggaacaccagcggggccgtgtgcgatggctgccag
cacaacaccatggggcgccactgccatctctgcaagcccttctactaccggcacccacgc
tccgatatccgcgctcccactgcctgcatcccgtgtgactgcgaccctgcgggatcgctg
gatggcggcgcctgtgatgcacacacggacgtggcgctgggcatgatcgcggggcagtgc
cgctgcaaggagaacgtggccgggccacgctgcgaccgctgccggcacggagcctatggc
ctcagccagggagaccctcagggctgccagccgtgccggtgtgacccacggggcacggtg
gcgggcagctccccctgtgaccccatcagcggggactgctactgcaagcgctttgtggcc
gggcgctcctgcagccagtgcgtgcctgagttctggggcctgagctatgatgtagggggc
tgccggccctgctcctgtgacttcgggggagcttacagcaaccggtgctccatggaggac
ggggcctgtccctgccgcccccacctcatgggccggcagtgtgaccaggtgcagcccggc
ttcttctgtgcaccccttgaccactacacctacgaggctgagcaagccgtgggccacggg
cccagccatccccagctcccaggcgccgtgcgggcagaggtgccccaggactgcccccag
caccgcagtggggacgcagcggggcggaaggcacgtgctcggccccagcgcagccctccc
cgctccccccagccccgcgcagccccacgccacagcctccagcagccccccaagcccgac
gtggagccggtgctgcgagatggggacgggcgcatggtgacgtggactggactggggttt
gcccgtgtgcgggatggagccgggctgacattccatgtagacaacgtgccctaccccatg
gagtacgagctgctgctgcgttacgagcctgagtcagccgaggactgggaggctgtggtg
agcatcagctccaaggtgctgcccaccggaccacgctgtgggaacctgctgccctcagag
cagatgtaccacgaaggcctgccccacagccagaggtatgtgctgctgtcccggcccttc
tgcttcgagcccagtaccccatacgaggtaactgtgcggctgcagagagccagcgtcacc
cagcgccaccccagtgccttcatcctcatcgactcactggtgctgctgccacgtgtgccg
gagctgccgggattccacggggcagcagtggaagcggtgcagcggctggaggagctggag
cgctaccgatgcctggaggctttccatatggccccaccgcacaccctggctgaagcctgc
gcccgcctcatctgcagcgtctcagctgtgctgcacgatggagctctgccctgccagtgt
gacccacaaggctcccgcagcagcgtgtgccaggtgctgtcagggcagtgtgagtgcaag
ccccacgtcctcggccgacgctgtgaccgctgcgcacccggcagctacggctttggaccc
ctggggtgcagcccctgcgcctgctccccggagggctctgtgtcgcagctgtgtgatgcg
ggcagtgggcagtgccgctgccagccgggcgttatgggccggcaatgcgaccgctgccag
ccgggacactggggcttccccatctgccggccctgccagtgcaacgggcacactgaggag
tgcgacctgcggacgggcagctgcctgcgctgccgagaccacaccgccggccggcactgc
gagagatgccaagacggttattatggagacccggtgctgggctcagggcagcagtgccgc
ccttgtccctgccctggctaccccggcacacggcactaccatgggagtgcctgccatgcc
gacgaggagacccaccacatcgtgtgcctctgcgcgcccggatacaccgggccccgctgc
gaccgctgctccccgggctactttgggacgccggagatggagggaggagtgtgccggccc
tgccagtgcaacaacaacatcgacaccagcgacccgggggcctgtgacccacacacaggg
cactgccgccgctgcctgtaccacactgccgggccccgctgtgcccagtgccagcccggc
tatttcggcaatgccctgcagcgcagctgtcgccgctgcagctgtgacccacggggaacg
ctgtctgcccactgcaccgctggcacctgcagctgtgaccgcgctacgggagcctgcgcc
tgcagagccaatgtggtgggcaggagctgcgaccgctgtgcacccaacttctggaacctg
ggggggacggagggctgccagccttgtggatgccatgccatgcacgccacgcaccccgct
tgcgacgaggtcacagggcagtgccgctgccacctcggctttggtggccgtgtctgttcc
cagtgccaggagaatcactggggagaccccgagctgcagtgccgagcctgcgagtgtgag
ccactgggcgctgagagcccgcagtgcgaccgagccagtgggcagtgccagtgccggcca
ggctttggggggctgcgctgcgaccgctgccagcggggctaccaggccgccttccctcgc
tgctctccatgccacccctgctttgggcactgggatgcagtgctgggcagcctgcaggat
gggctgcagcaccttggggcacgggtacgggcgctgcgtgaaggagggtctgcagcccca
ctcagcccccgcctgcgagcactggaggaggccctgaagcatgcagagcggctgctgggt
gaggggagcagccccagtagccccctcctgcaggagctggccgggcagctggatggcagc
aggacggagctggacaacttctggaagaggcttcaagagctggagcaacacgtggatcag
ctggagcaggctgatgtgctgcaccacagccggctggccaggctgagccatgagttgggt
ggtctcaaccaaaccacctcccacctgcaagctgtcctcggcaccgtgacagcagcagga
ttcagggagtcataccagagcatcgtgatggcagcacgggactcacggcaggcagaggtg
gtggccaatggcacggcaggtgagctgagagcagcacaggccatgcagtgggcagctgag
caggccctgcagcagcggggtgatgcgttccgccggagcatggctgcacagcggaaatcc
ctgcgggagacacagaaacgggtgtcagggctcagcgtggccgggatcaatgagaagatt
tgtggggctcctggagaccggagctgtgcagaatcactgtgtggaggagctctgtgccgg
gacagcgtggggatgaggcactgcgggggtgtggggtgcacaggggccctgcccgtgtca
gctcaagccctgagcagtgcccgcaatgcctcacagcagctggaggtggccctgggacag
ctgagtgccgtggcacagaagatgcaggaggttcaggacctggcacggggtgcccgcagc
cgtgcagaggaggcattggaacgctcacaggctgcccgcagccgcacagagaaggcgaca
gcacagttgcgggacttcatccgccgcatcaaagccttcctgtcggaggagggtgcagat
ccaggcagcatcgagctggtggcgcggcatgtgctgaacatctccctgcccagcagccct
gcacacatccaggagctgctgcgggagatgcaggagagcatcagccagctggatggggtg
gacgcggtgctcaacggcacggcacaggggctggaggctgcacaggggctgctggcacag
ggacaggatgccagggagcgagcagagggcatgagggacgagctggcggggacgcagctc
gcactgcaggtggcacgggcacaggtgatggcggctgggagcaccctgcggagagccaag
gatggcatccgggctgctgagggcaaagccagggaggcggagcgcaggctgcaggcgctg
caggggaaggagtcacggctgcagcggcggctgcgggagctggcacagcgcgtcaccgcc
ctgcagcagcgcggacaggacgcccggcgcctggcacaggatgccaaggatggggcacaa
cgtgccaccgccgcctcgaggacgctcagccaggacctggcgcaggtgactcggcgctac
gtggtgctcaaggaccgggtgagcgggatggcagggatggccggcggggccctgcagcgc
gtgacgcggctgacggccgaggccagggacctgctggataaagccaacagcagcaagaag
cggctggaagagctggagcagcacttcggggccaacgagcaggcgatggcggccaaggcg
acgcggctgcaggcgctggagcggcaggtgtcggggctgctgcaggagatccgcgagcgg
gccaacgcgtacgccacctgctag
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