Lagopus muta (rock ptarmigan): 125699865
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Entry
125699865 CDS
T09141
Symbol
TRMT2B
Name
(RefSeq) tRNA (uracil-5-)-methyltransferase homolog B
KO
K15331
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lmut03016
]
125699865 (TRMT2B)
Enzymes [BR:
lmut01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
125699865 (TRMT2B)
Transfer RNA biogenesis [BR:
lmut03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
125699865 (TRMT2B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Ubie_methyltran
Methyltransf_11
Methyltransf_4
Methyltransf_15
Methyltransf_32
Methyltransf_12
AviRa
PrmA
Methyltransf_23
Cons_hypoth95
DREV
TPMT
N6_N4_Mtase
UPF0020
Motif
Other DBs
NCBI-GeneID:
125699865
NCBI-ProteinID:
XP_048815807
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All DBs
Position
13:complement(2069535..2076373)
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AA seq
478 aa
AA seq
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MALPHASMLTRRCLRLLTPQPVFLSSLPGWDCRQPTGERAAKRRRRKDGEGRSLPASSWE
ERLADAATPLWRLPYQEQLQVKYESLREVLQILTSHLLELGGGVQDPGGLCCPLQPVVPS
PTINGYRNKSTFSVNRGPDGNPKTVGLYVGTGRARNIVCVRTDHMKNIPLKHKQVAQCYE
QFIRRSPLGSCILFHEGGHWRELVVRTSQHGHTMAIVTFHPQQLGREALDAQKALLREFF
TCGPGAACALTSLYFQESTMTRCSHEQSPFQLLHGEPHIFEDVLDLTFRISPDAFFQVNT
RGAEVLYRAVRELSQAATNTVLLDVCCGTGTIGLSLARHVSKVIGVEIVQKAIEDARWNA
AFNGISNCEFHSGKAEAVLPELLSSWEDARPLVAVVNPSRAGIHHRVVRAIRSCGAIRRL
LYISCKPEGEAMRNFLELCCPPDPRKKLEGEPFTPALAVPFDMFPHTAHCELVLLLTR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggctctgccccatgcatccatgctgactcgccggtgcctccgcctgctgaccccacag
cccgtgttcctgagcagcctgcctgggtgggactgccgacagccgacaggggagagagca
gccaagaggagaaggaggaaggatggggagggccgcagcctgcctgcatcctcctgggaa
gagaggttggcagatgcagcgacaccgctgtggagacttccataccaggagcagctgcag
gtgaagtatgaaagcctgagggaggttctgcagatcctgacatcacatctgttggagctg
ggaggaggtgtgcaggatcccggagggctctgctgtcccctgcagcccgtggtcccctcg
cccaccatcaatgggtaccgcaacaaatccacgttctctgtgaaccgagggccggatggg
aaccccaaaacagtggggctgtatgtggggacgggcagagcaagaaatattgtctgcgtg
agaactgaccacatgaagaacatacccctaaagcacaaacaagtggcccagtgctatgag
cagttcatccgccgctccccactgggctcctgcatcctgttccatgaaggtgggcactgg
agggagctggtggtgcgcacctcccagcacggccacaccatggccatcgtcaccttccac
ccccagcagctgggccgggaggctctggatgctcagaaagcactgctgagagagttcttc
acctgcggacctggagcagcgtgtgccctgacgtcactgtacttccaggagagcaccatg
acgcgctgttcccatgagcagtcacccttccagctccttcatggagagccacacatcttc
gaagacgtgctggacctgacatttcgcatctccccagatgcctttttccaggtgaacaca
agaggagcagaagtgctgtaccgggcagtcagggagctgagccaggctgccacaaacact
gtgctcctcgatgtctgctgtgggacgggcacgattggtctctctctggctcgccacgtg
tccaaggtcattggtgttgagatagtgcagaaggcaatagaggatgccaggtggaatgca
gcattcaatggaatttcaaactgtgaatttcacagtggaaaggcagaggctgtgttacca
gagctgctctcatcgtgggaggatgcccgaccccttgttgcagtggtgaacccatcccgg
gctgggatccatcacagggttgtgagggccatccggagctgcggggccatccgaaggctg
ctctacatctcctgcaagccggagggtgaagccatgaggaacttccttgagctgtgctgc
ccccctgacccaaggaagaagctggaaggagagccgtttacccccgcgctggctgtgcct
ttcgacatgttccctcacactgctcactgtgagctggtgctgctgctcacccgctga
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