Lagopus muta (rock ptarmigan): 125700537
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Entry
125700537 CDS
T09141
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut04010
MAPK signaling pathway
lmut04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125700537 (CACNA1H)
04020 Calcium signaling pathway
125700537 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lmut04040
]
125700537 (CACNA1H)
Ion channels [BR:
lmut04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125700537 (CACNA1H)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
125700537
NCBI-ProteinID:
XP_048817234
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All DBs
Position
15:9863946..10064902
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AA seq
2416 aa
AA seq
DB search
MSDGESREPRPAGGEVRVPITVPPRRPAEQPLDDAGSVPSGSPSRDPPPDLASEEEEQVP
YPALAPTAFFCLKQTTRPRSWCLRLVCNPWFEHVSMLVILLNCVTLGMFQPCEDVECQSE
RCTILEAFDDFIFAFFAVEMVIKMVALGIFGQKCYLGDTWNRLDFFIVMAGMMEYSLDGH
NVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQL
WAGLLRNRCFLDRNLATTYNLTFLHPYYRTDEAEENPFICSSHRENGMQKCSNIPTRKEY
KVECTLSMDSYTPSLYNPDFSSKNACINWNQYYNVCMAGDVNPHNGAINFDNIGYAWIAI
FQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENQ
LMQEQRARYLSNDSTIASFSEPGSCYEELLKYICHIFRKVKRRTIRLYNNWQSKRRKKVN
PNNTTNGQSRRSKKRITSIHHLIHHHHHHHHHHYHISNGSPRGPRSNPEICDLELKVMKP
GGQLMLPSPSPNLQSPAPPPDSESVHSIYHADCHVEGPQVNCKSSNAPASIKLTTGLSNH
GNMNYPTILPSPTSKASSVPVPKGKKNGNSPVAVVNSPVTLGTDSYGKLQQLVGEHGLRR
TPSRLSGLSVACPLPSPPGGTLSCELQDCPFCASLLEDPEFAFSESDSCDSDSNGIYEFT
QDLRHGDHRDQLQQQRGRRKRKKKKPKERNKVTRLWKAFGSKLKRIVESKYFNRGIMIAI
LINTLSMGIEYHEQPDELTNALEISNIVFTSMFALEMLLKLLAFGLFGYIKNPYNIFDGI
IVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLM
LFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNG
MASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSANFDDDFE
KLKDLRATEMKMYSLAVTPNGHLEGRGSMPPPIIMRTAATPMPTPKCSPHMDSVHTFVDS
RRGSNASLDPLTYDQKSSSSLRSSPCANWGTNSNWGSRRSSWNSLGRAPSLKKKNQSGER
ESLLSGEGKGSTDDDSDDAKSSTVSRPSLHRRAESLDYRSSLDLPELLQLPPMRHSLSIS
PMAVLPAEYQDCNGKMVHVPSEFFLHIDGHKEEAVDYEDDMEDSYCYRIRKVLEPYKPEW
CKSHEDWSLYLFSPQNRFRVMCQKVIAHKMFDHVVLVFIFLNCITIALERPDIDPHSTER
IFLSVSNYIFTAIFVVEMMVKVIALGFFSGENTYLQSSWNVLDGVLVFVSIIDIIVSMAS
AGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFG
ILGVQLFKGKFYYCDGPDVKNITTKTDCTNAHYRWVRRKYNFDNLGQALMSLFVLSSKDG
WVNIMYDGLDAVGIDQQPIQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQ
EAEEARRREEKRLRRLEKKRRSKEMYLSEAQRRPYYADYSPARKYIHTLCTSHYLDLFIT
FIIGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAVLKLVAFGFRRFFKDRWNQL
DLAIVLLSIVGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQ
ALPQVGNLGLLFMLLFFIYAALGVELFGKLDCSEENPCEGLSRHATFTNFGMAFLTLFRV
STGDNWNGIMKDTLRECTREDKHCLSYLPVISPVYFVTFVLIAQFVLVNVVVAVLMKHLE
ESNKEAKEDAEMDAEIELEMSRGASTSATSGSRGGAVALESRAPCRSQEAMKSEPAVQAK
HQALVMGGMASPQPQDSQNLLTVRKISVSRMHSLPNDSYMFRPVMPAKAPFPLHEVEMET
YPCKSQRGSITSIRSQPVGTCSSLRVPPESLHVAVRSPGREGWHRWKVLPPHVVPRSPAL
NKLLCRQEAIWTDSVDGHPPDPKDNVQAEHGEMPPSPKHPQHTLTPSPLHLAASSLPCSP
PRSPPTSPHRHPSLTRKHSCSQHGVPSPTESPPRPQGCLLEPSDLADEEVRHINSSAKDW
GEHSEAGSCSTSPFVSPAASPVPLKNCSTSSLAAGSSKERDLKKFYSIDTKGFLTKPSWA
DDQRRHSIEICPSVRDGDCGFEERAEEKPRSPAHIQPESEYIHGARRKKKMSPPCISIDP
PMEDDGGAASRTKPSENSMLRRRTPSCEFPAYREPLEPAEAQPGEPGCKAERRAQHLAIP
GFSFEQSDGGGSLSSLSDLLDSGRSTPDCELRKPEPLKTQRSNAEKSKELLSVAKSPVRM
QDLVTVATEEDIDEPV
NT seq
7251 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatggcgagagccgagagccgcgcccggccggcggcgaggtgcgggtgcccatc
accgtgccgccccgccgccccgccgagcagcccctggacgatgccggctccgttcccagc
ggttctcccagccgcgacccgccgcccgacctggcctccgaggaggaggagcaggtgcct
tacccggctctggcacccaccgctttcttctgcctcaagcaaaccacccgcccgcgcagc
tggtgcctcaggctggtctgtaacccctggttcgagcacgtcagcatgctggtcatcctt
ctgaactgtgtcaccctgggcatgttccagccctgcgaggacgtggagtgccagtcagag
cgctgcaccatcctggaggcatttgacgacttcattttcgctttctttgcggtggagatg
gtcatcaagatggtggctctggggatcttcgggcagaagtgttaccttggagacacgtgg
aatcgcctggacttcttcattgtgatggcaggcatgatggagtactctctggatggacac
aacgtcagcctgtctgcaatccgcaccgtgcgcgtgctgcggccgctgcgagccattaac
agggtcccaagtatgcgaatactcgtcaccctgctgttagatactctgcctatgttaggc
aacgtcctcctcttgtgcttctttgtcttcttcatctttgggatcgttggtgtgcagctc
tgggcagggctgctaagaaacagatgtttcctggacaggaatttggcaacgacatataac
cttaccttcctgcatccgtactaccgcacagacgaagcagaggagaatccattcatctgc
tcatcccatcgtgagaacggcatgcagaaatgctccaacatcccaaccaggaaggagtac
aaggtggagtgcaccttgagcatggactcctacaccccaagtttatacaaccctgacttc
agcagcaagaatgcctgcataaactggaaccaatattacaacgtatgcatggcaggggat
gtaaacccacacaatggagctatcaattttgataatattggctatgcctggatagctata
tttcaggttataaccctggaaggatgggttgacatcatgtactatgtgatggatgcacat
tctttttacaattttatatattttatattgcttataatagttggttccttcttcatgatt
aacttgtgcctggttgtgatagcaacacagttttctgaaacaaagcagcgggagaaccag
ctgatgcaggagcagcgggcccgttatctctccaatgacagcacaattgccagcttctca
gagccaggtagctgctacgaggagctgctgaagtacatctgccacatcttcaggaaggtg
aaacggcggacgatacgcctgtacaacaactggcagagcaagcgcaggaaaaaagtcaac
ccaaacaacaccacaaatgggcagagccgccggagcaaaaagcgcatcacctccattcac
cacctcatccaccaccaccaccaccaccatcaccaccactaccacatcagcaatgggagc
ccgcgggggccgcgctccaacccggagatctgcgacctggaactcaaggtgatgaagcct
ggtgggcagctgatgctcccttctccatcacccaacttgcagagccccgcgcctcctcca
gactcggagtctgtgcatagcatttaccacgcagactgtcacgttgaaggaccacaagtg
aactgtaagtcttccaatgcccctgcaagcattaaactcactactggactctccaaccat
ggcaacatgaattatcctaccatcctgccttcaccaactagcaaagccagttctgtccca
gttcccaaaggaaagaagaatggcaattcacctgtggctgtagtcaatagcccagtaact
ttgggcacggattcttatgggaagctgcagcagctggtaggagagcatggtctgcggagg
actcccagccggctgtcggggctgagcgtggcctgcccactgcccagcccgccgggcggc
acgctgagctgcgagctgcaggactgccctttctgcgccagcctcctggaggaccccgag
ttcgccttcagtgagtccgacagctgcgactccgacagcaacggcatctatgagttcacc
caggacttgcggcacggtgaccacagggaccagctgcagcaacagcggggcaggaggaag
aggaagaaaaagaaacccaaggaaaggaacaaggtcacccgcctgtggaaggcattcggc
agcaagctgaagaggatcgtggagagcaagtacttcaaccgagggatcatgatcgcgatc
ctcatcaacacgctgagcatgggcatcgagtaccacgagcagccagacgagctgaccaat
gccttggagatcagtaacatcgtcttcacaagcatgttcgccctggagatgctcctgaaa
ctccttgcctttggcctcttcggctacatcaagaacccatacaacatctttgatgggatc
atagttgtcatcagtgtctgggagatcatcgggcagtcggacggcggtctttccgtgctc
cgaactttccggctgctccgggtgctgaagctggtgcgcttcatgcccgccctgcgtcgc
cagctggtggtcctcatgaagacaatggacaacgttgccaccttctgcatgttgctcatg
ctcttcatctttatcttcagcattctcggcatgcatctttttggatgcaagttcagtctg
aagactgatacaggagacacagttccagatagaaagaattttgattccttgctttgggcc
attgtgacagtatttcagatcctcactcaagaggactggaatgtggtcctgtacaatgga
atggcatcaacatcttcatgggcagcgctctactttgtggccctgatgacctttggcaat
tacgtgctcttcaaccttctggttgccattctggtggaaggcttccaggcagagggggat
gccaataggtcagacacagatgaggacaagacatctgccaactttgatgatgattttgag
aagctgaaagacctccgtgcaacagagatgaagatgtattcacttgctgtcaccccgaat
gggcacctggagggcaggggaagcatgccaccccctataatcatgcgcaccgctgccaca
ccgatgcccactccgaagtgttccccacacatggattcagtgcacacttttgtggactca
aggagagggagtaatgcttctctagatcccctgacctacgaccagaagtcctcgtccagc
ctccgcagttctccttgtgccaactggggtaccaacagcaactggggaagccggcgctca
agctggaacagcctgggcagagccccaagcctcaagaagaagaaccaatctggtgaaaga
gagtctttgctctcgggagaggggaaaggcagcacagatgatgactccgatgatgccaag
tccagcacggtcagcaggccctcactgcaccgccgggcagagtccttggattatcgcagc
tccctagacctgcccgagctgctgcagctgccccccatgcgccattcgctcagtatcagc
cccatggctgtgctgcctgctgagtaccaagactgcaatggcaagatggtgcacgtcccc
agtgagttcttcctgcacatcgatggccataaggaagaggccgtggactatgaggatgac
atggaggatagttactgctaccggattcgtaaagtcctggagccctacaaaccagagtgg
tgcaagagtcacgaggattggtccctctacttgttttccccacagaatcggttccgagtg
atgtgccagaaggtcattgcccacaaaatgtttgatcatgtggtgctggtcttcatattt
ctcaactgcattacaatagccctggagcgaccagacatagatccgcacagcaccgagagg
atattcctgagtgtttctaattacatcttcactgcaatctttgtggttgaaatgatggtt
aaggtaatagctcttggctttttctctggggagaacacctatctacagagcagctggaac
gtcctggatggagttttggtcttcgtatctatcatagacattattgtctccatggcatca
gcaggaggagcaaagatcctgggtgtccttcgtgttttgagactgctgcggaccttgagg
cctctccgagtcatcagcagagccccaggtctgaagctggtggtagaaaccttgatctcc
tccttgaggcctattgggaatattgttctcatctgctgtgctttcttcattatctttggg
attttaggggtgcagctttttaaaggcaagttctactactgtgatggtcctgatgtgaaa
aacatcactacgaagaccgactgcaccaatgcacactacagatgggttcggcggaagtac
aattttgacaatttgggacaggctctcatgtccttgtttgtcctttcctccaaagacggc
tgggtaaacatcatgtatgatggtctggatgctgtgggtattgaccaacagcccatccag
aaccataacccttggatgcttctctacttcatctccttcctgctcatcgtcagcttcttc
gtgctcaacatgttcgtgggggtggtggtggagaacttccacaagtgccggcagcaccag
gaggcagaggaggcccggcgtcgggaggagaagcgtctgagacgcctggagaaaaagcgc
aggagtaaggagatgtacctgtctgaagcccagcgcaggccttactacgctgactattct
ccagcacggaaatacattcacaccctctgcaccagccactatctcgacctcttcatcacc
ttcatcattggagtcaacgtcatcactatgtcgatggagcactacaaccagccaaagtct
ctggatgaagccctgaagtactgtaactacgtgttcaccatcgtttttgtgttcgaggca
gtcctgaagttggtggcatttggttttcgaaggttctttaaggacagatggaatcagctg
gatttggccatagttctcttatcaattgtgggaatcacgctggaggaaattgagatgaat
gctgcactgcccatcaatcccacaataatacgcatcatgcgggtgctgagaatagcaaga
gtgctgaaactgcttaaaatggccaccggaatgcgagctctcctggacacagtggtacaa
gcccttccccaggtagggaaccttggcctactttttatgctcctgttttttatctatgct
gccctgggagtggaattgtttggcaagctagactgcagtgaagagaatccttgcgaaggg
ctgagccggcacgcgacgttcaccaactttgggatggccttcctcaccctcttcagggtg
tccacgggggacaactggaacggtatcatgaaggacactctccgggaatgcacccgggaa
gacaagcactgcctcagctacctgcctgttatttctcctgtctacttcgtcaccttcgtc
ctcatcgcacagttcgtcctggtcaacgtggtggtggctgtgctgatgaagcacttggag
gagagcaacaaggaggccaaggaggatgctgagatggatgctgagatcgagctggagatg
tcccgaggagcaagcacgtcagccaccagtggcagcaggggaggtgcagtggccctggag
agcagagcaccctgcagaagccaggaggccatgaagtccgagccagcagtgcaggcgaag
caccaagccctggtaatgggaggcatggccagcccgcagcctcaggattcccagaacctg
ctgacggtccgcaagatctccgtttcacgcatgcactccttgcccaatgacagctacatg
ttccggcctgtgatgccagccaaagctccttttcccctccacgaggtggagatggagacg
tatccctgcaagtcacagcgagggtccatcacctccatccgctcgcagcccgtggggacg
tgctcctccctgagggtcccccccgagtccctccatgtggctgtgcgctcccccggccgc
gagggctggcaccgctggaaggtccttcccccgcacgtcgtcccccggtctcctgctctc
aacaagctgctgtgccggcaggaggccatttggacagactctgtggatggacaccctcca
gaccctaaggacaacgtgcaagcagagcatggagagatgccaccatcaccaaagcaccct
cagcacaccctcacccccagccctctccacctcgcagcctcctccctgccatgctcccct
ccacgctccccaccaacctccccacaccggcacccatcgctgactcggaaacactcttgc
agccagcacggggtccccagtcccaccgagagccccccaaggccccagggctgcctcctg
gagccctccgacctggctgacgaggaggttcgccacatcaacagctcagccaaagactgg
ggggagcactcggaggccgggagctgctccacatcgccgttcgtctcgccggccgcatcg
ccggtgcccttgaagaattgcagcacaagcagcctggcagcaggcagcagcaaggagagg
gacttgaagaagttttacagcatcgatacgaagggcttcctcaccaagcccagctgggcg
gatgaccaaaggcggcactccatcgagatctgcccctccgtccgcgatggggactgcggc
ttcgaggagcgcgccgaggaaaagccgcgctcccctgcccacatccaaccggagtctgag
tacatccatggagcccggaggaagaagaagatgagcccgccctgcatttctatagatcct
cccatggaggatgacggcggggcggcctcgcgcaccaaaccctccgagaacagcatgctg
cgccgcaggaccccgtcctgcgagttcccggcgtaccgagagcccctggagccggcggag
gcgcagccgggggagccgggctgcaaagcggagcgccgtgcccagcacctcgccatcccc
ggcttctccttcgagcagtcggatggcggcggctccctgagcagcctctcggatctgctg
gacagtgggcgatccacaccggactgcgaactgagaaagccggagcccttaaaaactcaa
cggagcaacgccgagaaaagcaaagagctgctcagcgtggccaagagccccgtccggatg
caggacttggtgactgttgcgacagaagaagacatcgacgagcccgtatag
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