Lagopus muta (rock ptarmigan): 125701628
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Entry
125701628 CDS
T09141
Symbol
SETD1B
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
lmut
Lagopus muta (rock ptarmigan)
Pathway
lmut00310
Lysine degradation
lmut01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
125701628 (SETD1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lmut03036
]
125701628 (SETD1B)
Enzymes [BR:
lmut01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
125701628 (SETD1B)
Chromosome and associated proteins [BR:
lmut03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
125701628 (SETD1B)
HMT complexes
COMPASS/SET1 complex
125701628 (SETD1B)
COMPASS/SET1 complex (yeast)
125701628 (SETD1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
125701628
NCBI-ProteinID:
XP_048819880
LinkDB
All DBs
Position
17:complement(7012522..7054391)
Genome browser
AA seq
2079 aa
AA seq
DB search
MCRRRRAVRRSRRSQRCIVGGRRRQQRAHTICGGSRKREAGAWRAARAGNRPHVRRGARL
SPPGDDRPPSAMSFREIKAGEKAKHPEDHGKKQSSSWINGMENSTQASTSVEKRNHHWRS
YKLIIDPALKKGQHKLYRYDGQHFSMPNSGIAPVDCVRDPRIGRIWTKTKELELSVPKFK
IDEFYVGPVPPKQVTFAKLNDNIRENFLTDMCKKYGEVEEVEILYNPKNKKHLGIAKVIF
ATVKGAREAVQHLHNTSVMGNIIHVELDTKGETRMRFYELLVNGLYTPQTLPVGTEQDTS
PTANETLQLTDSLKRLKDSNLSSAGSSVTPNSSTPFSHDTAYSSCRQDTPNSFSQFTPQS
QGTPHTPRLGTPFSQDSTYSSRQTTPVYHFGQDSGYKHRRHETKFTDAYNRRPGGHHYVH
NSPGVFRGTEHQFSTFKSHQQEPVQFSHTPPLSHSSSSSYKSAFSPYQAPAVFPQSEEQP
FAQTSREAEYRRPAPPPAEMVVESSAATSADFAPVKEKPEEPPPLPDSNSAPEPSAPSFS
QTPERSETPGTPTMESEMQHNSLDSRIEMLLKEQRTKLPFLNEHDSDNEVRMEGSPISSS
SSQLSPIPMYGSNSQPGYRAQTPSSRPSSTGLEDISPTPLPDSDDDEPIPGTASLNQNSR
GTSEASMTPIDQLNRTSKVETLEVKEMVPGDQTPISEKMDESQHSSGEDMEISDDEMNSA
PITSAECAKTIVVNSSVSNAAVMAPSIPPLPPPPGFPPLPPPPPPPPQPGFPMPPPLPPP
PPPTHPAVTVPPPPLPAPPGVPPPHILPPLPPFHPGMFPVMQVDMISVLGNHWGGMPMSF
QMQTQMLSRMMQAQNTYQYPPFMAGRMQFVNLPPYRPFSMGAALGRGQQWPPLPKFDPSV
PPPGYEPKKEDPHKATVDGVLLVIVKELKAIMKRDLNRKMVEVVAFRAFDDWWDKKERLA
KASLTPVKSGGELEEKPKPKDRITSCLLENWNKGEGLGYEGIGLGIGLRGAIRLPSFKVK
RKEPPEAASAGDQKRIRPSTSVDDEDEELERDRDASDTTSDLSKKDAEAVGLRRRPARPL
ELDSEGEEGDETSGKEEESSSEKEEEQEEEGGLVKAAPGKEEEEDEDDEEDEDDDEDDED
EEDYEETGVETSDKEEEQDSEEEDVASPSSSKAEVESSDESEDSSEFESSSDSDEDDEEE
EEDEDEEEEEEEEEVAEDQDREAMVAETEHEPASHELLDDKRETILELYPVDYMDATGLG
LSEPALVEKDEGMEEVKAEESECDQVPEESIAAETLKQLVMERDQEPKLALSPICRPVEE
PEPIVMLEPEVQECPKPESQDEAGTVCLSTPVAVFGEPLPNKSSFFRKSDDSCLETHVKT
KLPSAVEEEDRLPRTPGREAVVHSETDILLLPAHKVPSSTLPLPSTPGKEESVVPPEKFP
EQLMVTKTSIEEEIPRTPGRDILAKSSHPLAKSQSTDTVPATPGSDAPLTGSSLTLSSPQ
VPGSPFSYPSQSPGINSGIPRTPGRDFNFTPTFPEAGATIPCLLSGKKQSEDDLEEKPFK
EPLGASLTISMNSVPSPIPFASPTQADFRTDMGLPPNEPIPIAALPCMPGDGRMPIEECK
AEVKSVLLSPEAPVGASILPPPPPPSVLPKRRPGRPRRSPPSVLSLDMYSGKAIEPPPVP
VALVESAMSKELLSAHPDAFYGLKDPEAVTLDFRNDSFHEKIAAETVAEKLPFKELENQW
NEDFKEEEAHVKPKRQWRRQKKSPEHLPVIPSPEYSPPQPQFRPRSEFEEMTILYDIWNG
GIDEEDIKFMCITYDRLLQQDNGMDWLNDTLWVFHPSTSFSTPKKKKRDDGMREHVTGCA
RSEGYYKIDKKDKLKYLNNSRAFAEEPPADTQGMSIPAQPHASTRAGSERRSEQRRLLSS
FTGSCDSDLLKFNQLKFRKKKLKFCKSHIHDWGLFAMEPIAADEMVIEYVGQNIRQVIAD
MREKRYEDEGIGSSYMFRVDHDTIIDATKCGNFARFINHSCNPNCYAKVITVESQKKIVI
YSKQHINVNEEITYDYKFPIEDVKIPCLCGSENCRGTLN
NT seq
6240 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaggcggcggagggcggttaggcgttcgcggcgctcgcagcggtgtattgtggga
ggccgccgccgccagcagcgagcacacacaatatgtggtggctcgcgaaaacgggaggca
ggagcctggcgggcagcccgcgccggtaaccggccccatgtgagacggggagctcgcctt
tcgccgcccggagacgatcggccgccgagcgcgatgtctttccgagagatcaaggcgggg
gaaaaagccaagcaccctgaagatcatggcaaaaagcagagttcaagttggatcaacgga
atggagaacagcacccaagccagcacttctgtcgagaaaagaaatcaccattggagaagt
tacaagttgattattgacccggctctgaaaaaaggacagcacaaactctaccgctacgat
gggcaacatttcagcatgccgaactcgggaatcgctcctgtggattgtgtcagagatccc
agaatagggcgaatatggaccaaaacgaaggagttggagctgtctgtccccaaattcaag
attgatgagttttacgtggggccagtgcctcccaagcaggtcacctttgccaagctgaat
gacaacatccgtgaaaactttttaaccgacatgtgcaagaaatacggtgaagtggaagag
gtggagattctctacaaccccaagaacaagaagcacctgggcattgccaaagtgattttt
gccactgtcaaaggtgcccgggaggctgtccagcaccttcacaacacctctgtcatgggc
aacattatccacgtggagctggatacaaaaggtgaaacccgcatgcgattctatgagctg
ctcgttaatggtctttacactcctcagaccctgcctgtaggcactgaacaggacacatcg
ccaactgcaaatgaaaccctccagttgacagattctctgaagcgcttgaaggacagtaac
ctttcctctgcgggatcgtctgtcaccccaaacagcagcacgccgttttcccacgacaca
gcctattccagctgtcggcaggacaccccaaactcattcagtcaattcaccccgcagtcc
caagggacgccccacaccccacggttagggacgccattttcccaggattccacgtattcc
agccgtcagacgacgccagtgtaccactttgggcaggacagtgggtacaaacacaggaga
cacgaaacaaaatttacggatgcctacaaccgtcgaccgggaggacatcactatgttcat
aattctcctggtgttttccgcgggacagagcatcagttcagtacgttcaaatcccatcag
caggagccagttcagttctctcacactcctcccctgagccactcgagttcttcgagttac
aagtctgccttctctccttaccaagcaccagccgtatttccgcagtctgaggagcagccg
tttgcccaaacttccagggaagcagagtaccgaagacctgcgccgcctcccgccgagatg
gtcgtagaaagcagtgctgccaccagcgctgattttgctccagtgaaggagaaaccagag
gaacctccacccttaccagattcaaactctgctcctgagccgagcgcaccgtccttctct
cagacgcctgagaggagtgagacccctggcacccccaccatggagtctgaaatgcagcat
aatagtttagactcaaggattgagatgctcttaaaagaacagagaacaaagttacctttt
cttaatgagcatgactcagataatgaggtccgaatggaaggtagccctatctcctcttcc
tcctcccagctctctcccatcccaatgtacggttcgaactctcagcccggttacagagct
cagacaccttcctcacgcccttccagcacgggcctggaggacatcagccccacgccgtta
cctgactctgatgatgatgagcccatccctgggactgcttctctgaatcagaattccagg
ggtacatcagaggccagcatgactcccattgatcagctgaacaggacctccaaagtcgag
accttggaggttaaagaaatggtgcctggggaccagactccaatatcagaaaagatggac
gagagtcagcattcttcaggggaggacatggaaatctccgacgatgagatgaactccgcg
cccatcaccagtgcagagtgtgccaaaaccattgtggtcaactcctcagtcagcaacgca
gctgtcatggccccatccatccctcctctgccaccgccgcctggattccctcctcttcct
cctcctccaccaccacctccacagccgggttttccgatgcctccgccgctgcctcctcct
cctcctcccacacaccctgctgtcaccgtgccccctccaccgctccctgctccccctggg
gtccctccacctcacatcctgcctccgcttcctcccttccatcctggcatgttcccagtc
atgcaggtggatatgataagtgtcttgggcaaccactggggtggcatgcccatgtccttc
cagatgcaaactcagatgctcagtcggatgatgcaggcacagaacacataccagtatccg
cctttcatggcgggcaggatgcagtttgtgaatctgccgccctaccgcccgttctctatg
ggagcagctcttggtcgtgggcagcagtggccaccactgcccaagtttgacccctcggtt
ccaccgccgggttatgagcccaagaaggaagatccccacaaagccactgtggatggagtc
ctcctggtcatcgtgaaggaactgaaggctatcatgaaaagggacctgaaccggaaaatg
gttgaagtggttgcatttcgggcatttgatgactggtgggacaagaaggaacggctggca
aaggcatctctcacaccagtgaagtctggaggagagctggaggagaaaccaaagccaaag
gatcgaatcacatcttgcctcttggagaactggaacaaaggcgaaggcctgggatacgag
ggaattggcttgggcattgggttacgaggggccatccggctgccatccttcaaggtgaaa
agaaaggagccaccagaagctgcctcagcaggagatcagaagagaatccggccttctact
tctgttgacgatgaagatgaagagttggagagggacagagatgcttccgataccacatcc
gacctgtcgaagaaggatgcagaagcagtggggctgaggcggcgaccagcaaggccactg
gaactcgacagcgagggggaagagggagatgagacatcagggaaagaggaagagtcttcc
tcagagaaagaagaggagcaggaggaagaaggaggcttggtgaaagcagcacctggcaag
gaggaagaggaggatgaagatgatgaggaagatgaagatgacgatgaggatgatgaagat
gaagaggattatgaagagacaggtgttgaaacaagtgacaaagaggaagagcaggactct
gaagaggaagatgtagcgagtccctcatcttccaaggctgaagttgaatcatcagatgaa
agtgaggactcctctgaatttgaatcaagttctgactcagatgaagatgatgaggaggag
gaggaggatgaagatgaagaagaggaggaggaagaagaagaggtggctgaagatcaagac
agagaagccatggttgctgagacggagcatgaacctgccagtcatgagcttctcgatgat
aagagggagaccattttggagctatatcctgtggactacatggatgcaacgggcttggga
ctctcagagccagctttggtagagaaggatgaagggatggaagaagtcaaagcagaggaa
agtgaatgtgatcaagtcccagaggaatctattgctgctgaaacactcaaacagttggtt
atggaaagagaccaggagccaaaacttgcactgtctcccatctgcaggccagtggaagag
cctgaacccatcgtcatgctggagccggaggtacaggaatgcccaaagcctgaatcgcaa
gatgaggctggcacagtctgtctctcgactccagtggcagtctttggagaacctctgccc
aacaaaagcagcttctttaggaagtctgatgacagctgcttagaaacgcatgttaagaca
aagctgccctctgcagtggaggaggaggacaggttgcctcgcacacctggacgggaagca
gtggtccattcagagactgatattcttttgctcccagcccacaaggtgccatcctccaca
cttcccttaccatcgactcctggtaaagaggaatctgtagtccctccagaaaagttccct
gaacaattaatggtgaccaaaacgtccatagaagaggagattcctaggactcctgggcgg
gacattttggccaagtcttcacacccccttgcaaagtcgcagagcacagacactgttcca
gccacgccaggaagtgatgctccccttacaggaagcagcttgaccctcagttcccctcaa
gtcccagggagccccttttcctacccatcccagtctcctggcattaacagtggcattcct
cggactcctgggagagatttcaatttcacgcctactttcccagaggctggtgctaccatt
ccttgccttctgtctggcaagaaacagtcagaggatgacctagaagagaaaccttttaaa
gagcctcttggtgcttcccttactatcagcatgaacagcgttccttctcctatccccttt
gccagccccacgcaagcagatttccgcacagacatgggcttgccacctaacgagccaata
cccatcgcagccctgccatgcatgcctggagatggaagaatgcccatcgaggagtgcaag
gcagaagtaaaatctgttttgctctcgccagaagcacccgttggtgcatctattcttcct
ccaccaccaccaccttctgttcttcccaaaaggaggccgggtcggccaaggcggtcccca
ccttctgtcctctcattggatatgtactcgggcaaagccatcgagccaccccctgtccct
gtggctttggtggaaagtgctatgagcaaagagcttctgagtgcacaccccgatgctttc
tatggactgaaggaccctgaagccgtcaccctagatttcaggaatgacagcttccacgag
aaaatagcagctgagacagttgcagagaaactgccatttaaggaattggagaaccagtgg
aatgaagatttcaaggaagaagaagctcacgtgaagcctaaaagacagtggcgaaggcag
aagaagtcacccgagcacctcccagtgattccttccccagagtactccccaccccagcct
cagttcaggccacgctccgagtttgaggagatgaccattttgtatgatatttggaatgga
ggcatagatgaggaagatatcaaattcatgtgtatcacgtatgaccgcctcctgcagcag
gacaatggtatggactggctcaatgacacactgtgggtattccatccttctaccagcttt
tccacccccaagaaaaagaagcgggacgatgggatgcgggagcacgtcacgggctgtgca
cgaagcgaaggctattacaaaatcgataagaaggacaaactcaaatacctcaataatagc
cgagcttttgcagaggagcctccagctgacacgcaggggatgagcatccctgcccaacct
cacgcttccacgcgggctggctccgagcggcggtcagagcagcgcaggctcctctcctcc
ttcactggtagctgcgacagcgacctgctcaagttcaaccagctcaagttccggaagaaa
aagctaaaattctgcaagagccacattcacgactggggcctttttgccatggagcccatt
gcagctgatgagatggtgattgagtacgtgggtcagaacatcaggcaggtcattgctgac
atgcgtgaaaagcgatacgaggatgaaggcattgggagcagttacatgttcagagttgac
catgacacaatcatcgatgctacaaagtgtggaaactttgccaggtttattaatcacagc
tgcaatccaaattgttatgctaaagtgatcacggtggagtctcaaaagaagatcgtcatc
tactcaaaacagcacatcaatgtgaatgaggaaattacttacgactacaaatttcccatt
gaggatgtaaaaatcccatgtttatgtggctctgagaactgcaggggaaccctaaactga
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integrated database retrieval system
