Lagopus muta (rock ptarmigan): 125703163
Help
Entry
125703163 CDS
T09141
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
lmut
Lagopus muta (rock ptarmigan)
Brite
KEGG Orthology (KO) [BR:
lmut00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lmut02000
]
125703163 (SLC6A4)
Transporters [BR:
lmut02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
125703163 (SLC6A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
Motif
Other DBs
NCBI-GeneID:
125703163
NCBI-ProteinID:
XP_048823231
LinkDB
All DBs
Position
20:3700991..3724423
Genome browser
AA seq
666 aa
AA seq
DB search
MENKATSNETQLLTTKKGTSDCNEGEDCKENGLLIKNPKSALRLMEDGNKIHPGQGNKEE
AAQISNGYSGVQSSVPCNGVGEVEDAQCTNPAATTTTATTCGAEGQQQLMELEDRETWSK
KIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALGQYHR
NGCISIWRKICPIFKGIGFAICVIDLYVASYYNTIMAWVFYYLVSSFTTELPWTSCNNAW
NTGNCTTYFSKDNISWALHSISPAEEFYTRQVLQVHRSNGLDDLGGISWQLTLCLLLIFI
IVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVLYYLKPEWQKLLATE
VWVDAAAQIFFSLGPGFGVLLAYASYNKFHNNCYQDALVTSTVNCLTSFVSGFVIFTVLG
YMAEMRNEDVSEVAKDMGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTFAGLE
GVITGVLDEFPHVWSKRREFFVLGLIIICFLGSLATLTFGGAYVVKLFEEYATGPAVLTV
VFLEAVAVAWFYGITQFCNDVKEMLGFTPGWYWRVCWVAISPIFLLFVTCSFLSNPPELR
LFDYNYPYWTTVVGYCIGTSSIICIPIYMVYRLIITPGTFKERILKSITPETATEIPFGD
IHMNAV
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaaggcaacaagcaacgagactcagctgctgactaccaagaaaggtacctca
gactgtaacgaaggagaagattgtaaagagaacggactgctgatcaagaaccctaaatct
gccctacggctcatggaggatgggaataaaatccatcccgggcagggaaataaggaggag
gcagctcagatctcaaatggctattcgggagttcagagctccgtgccttgcaatggggtg
ggagaggtggaggatgcgcagtgcaccaacccagcagccacaaccaccacagccaccacg
tgtggagcagagggccagcagcagctgatggagctggaagacagagagacctggagtaaa
aaaattgactttctgctctctgtcattggatacgcggtggatctgggaaacgtgtggaga
tttccttacatatgctatcagaatggaggaggagcattcctcattccttacacaattatg
gccatcttcggtggtattccgctcttctatatggaattagcactaggacagtaccacagg
aatggctgtatttcaatttggagaaaaatatgtcctatattcaaaggcattggctttgcc
atctgtgtcatagacctctatgtagcctcctattacaacaccatcatggcgtgggtcttc
tactacctcgtgtcctccttcacgacggagctgccgtggaccagctgcaataatgcatgg
aacacaggcaactgcactacctacttcagcaaggacaacatcagctgggccctgcactcc
atctctcctgcagaagaattttatacccgccaagttctacaggtgcacaggtccaatggg
ctggatgacctggggggcattagctggcaattgaccctctgtttattgttaatcttcatc
attgtatacttcagcatctggaaaggggtcaaaacgtctggcaaggtggtgtgggtcaca
gccacattcccctacatcatactttttatcctgctagtgagaggggcgactctgcccggt
gcctggagaggtgtgctctactacctgaaacctgaatggcagaagctcctggccactgag
gtttgggtggatgcagcagctcagatttttttctccctcggcccagggtttggggtcctg
ttggcttatgccagctacaacaaattccataacaactgctaccaagatgccctggttacc
agcactgtgaactgcctgaccagcttcgtgtccgggtttgtcattttcactgtgctgggg
tacatggctgagatgaggaatgaagatgtgtcggaggttgccaaagacatgggacccagt
ctgctcttcattacctacgctgaagccattgcaaacatgcctgcctcaactttctttgcc
atcatatttttcttgatgttactcacgctgggattagacagcacgtttgcaggattagag
ggagtgattacaggagtactggatgaattcccacatgtctggagcaagcgcagggaattc
tttgtcctcggactgatcatcatttgctttttggggtcgttggcaaccctgacttttgga
ggcgcctatgtggtgaagctgtttgaggaatacgccacaggcccagctgtgctaacagtg
gtgttcctggaagcggtggcagtggcctggttctacggcattacccagttttgcaatgat
gtgaaagaaatgctgggcttcaccccaggctggtactggcgagtgtgctgggtggcaatc
agtcccatcttcctgttgttcgtcacttgcagctttctgtccaaccctcctgagctacgg
cttttcgattacaactatccctactggaccacagtagtgggctactgcataggaacctct
tccatcatctgtatcccaatctacatggtttatcggttgatcatcactcccggaacattt
aaggagcgtattctgaaaagcattactccagaaacagccacagaaattccttttggagac
atccacatgaacgcagtgtaa
DBGET
integrated database retrieval system
