Labrys sp. KNU-23: FZC33_10830
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Entry
FZC33_10830 CDS
T06193
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
lne
Labrys sp. KNU-23
Brite
KEGG Orthology (KO) [BR:
lne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lne03009
]
FZC33_10830 (rimO)
Enzymes [BR:
lne01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FZC33_10830 (rimO)
Ribosome biogenesis [BR:
lne03009
]
Prokaryotic type
ribosomal protein modification factors
FZC33_10830 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
RRM_occluded
Motif
Other DBs
NCBI-ProteinID:
QEN86788
UniProt:
A0A5C1WCZ0
LinkDB
All DBs
Position
1:263063..264415
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AA seq
450 aa
AA seq
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MAVIEAAQETAEGKTAPTVSYVSLGCPKALVDSERILTQLRAEGYGITRNHKGADLVIVN
TCGFLDSAKAESLGAIGDAMAENGKVIVTGCMGAEPDPILEKFPNVFAVTGPQQYETVVE
AVHKAAPPAHDPFTDLVPPQGLKLTPRHYAYLKISEGCNNRCSFCIIPKLRGDLVSRPAG
DVMREAEKLVKAGVKELLVISQDTSAYGVDIRYAESPWQGEPLKAKFYDLSKALGELGVW
VRMHYVYPYPHVDDVIPLMAERKILPYLDIPFQHASPTVLKAMRRPGNQEKVLERIHKWR
EICPDITLRSTFIVGFPGETDEDFELLLDWLREAQLDRVGCFEYEPVAGATANDLGLMPV
PDEVKKQRHRRFMETQQQISIRKLKNKVGKRLPVIIDETGPTVARGRSMADAPEIDGAVY
VASRRPLRVGDIVTVKIERSDAYDLHGIAV
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgatcgaagcagcgcaagagacggcggagggcaagacggccccgacggtctcc
tatgtctcgctgggttgccccaaggccctggtcgattccgagcgcatcctcacccagctc
cgggccgagggctatggcatcacccgcaaccacaagggcgccgatctcgtcatcgtcaat
acctgcggcttcctcgattcagccaaggcggagtccctcggcgccatcggcgatgccatg
gccgagaatggcaaggtcatcgtcaccggctgcatgggtgccgaacccgatccgatcctg
gaaaaattccccaacgtcttcgccgtcaccggccctcagcaatatgagacggtggtcgaa
gcggtgcacaaggcggcacctccggcccatgatcccttcacggatctggtgccgccgcag
ggtctcaagctcacgccgcgccactatgcttacttaaagatttcagaaggttgcaacaat
cgctgcagcttctgcatcatccccaagctgcgcggcgacctcgtctcgcgcccggcgggc
gacgtgatgcgcgaagccgaaaagctggtaaaggccggcgtcaaggaattgctggtaatc
agccaggatacctccgcctatggcgtcgatatccgctatgccgagagcccctggcagggc
gagcccctgaaggcgaaattctacgatctctccaaggctctcggtgagctcggggtctgg
gtgcgcatgcactatgtctacccctacccgcatgtcgatgacgtcatcccgctgatggcg
gaacgcaagatcctgccttacctcgacatccctttccagcatgcctccccgacggtgctg
aaggcgatgcgccgtcccggcaaccaggagaaggtgctggagcgcatccataaatggcgc
gagatctgccccgacatcaccttgcgttcaaccttcatcgttggcttccccggcgagact
gacgaggatttcgagctgctgctcgactggctgcgcgaagcccagctcgatcgcgttggc
tgcttcgaatatgagcccgtggccggcgccaccgccaatgacctcggcctgatgccggtg
ccggacgaggtgaagaagcagcgccatcgccgcttcatggaaacccagcagcagatctcg
atccgcaaactgaagaacaaggtgggcaagcgcctgcccgtcatcatcgacgagaccgga
ccgaccgtcgccagggggcgctccatggccgatgcgccggagatcgacggtgcggtctat
gtcgccagccgccgaccgctgcgcgtgggcgacatcgtcaccgtgaagatcgagcgctcg
gatgcctacgacctgcacggcatcgcggtctga
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