Loa loa (eye worm): LOAG_17807
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Entry
LOAG_17807 CDS
T02664
Name
(RefSeq) DNA-directed RNA polymerase
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
loa
Loa loa (eye worm)
Pathway
loa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
loa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LOAG_17807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
loa03021
]
LOAG_17807
Enzymes [BR:
loa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LOAG_17807
Transcription machinery [BR:
loa03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
LOAG_17807
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
9941628
NCBI-ProteinID:
XP_020305846
LinkDB
All DBs
AA seq
1128 aa
AA seq
DB search
MDCDIASYHVESFDYLAEQGVHLAALDVPAEKFRLPTGEAVELRYTGAQLGYPMIEMKQG
SAVDSLKLFPSECRQRGLTYRGPLKVNIEICLNGAKMDFCEVIVGEVPIMLKSNRCHLRW
LTREQLIAHGEEGTEKGGYFICKGNEKVIRLLVANRRNYPIGLVRHSFREKGSLFTQYGV
MIRCVRGNYSAAMMTLHYLESGTIVIALQYRRELFYLPFMYVIKSLTSMNDQCIMEHMIR
CRPGDHFWKGCVTTMLALCSDDGIVNQKAALTAIGERFRVATQDRVGPWEVSEDVGRFLL
RVCVAIHLDNDEDKFFLLSYMAQKLIALTKGECAAESPDNPQFQEAAVSGHILLLIIRER
LENTLNIARRKIELEAKRKAESFLLSSHELIRAMGTQRSGEITRGLEYFLATGNLISRGG
LTLQQNNGFSVIAERINQLRFVSHFRAIHRGAFFMEMRTTDVRKLRPEAWGFICPVHTPD
GAPCGLLNHVAASVRIVTHYSNTSELPKLLGELGMVGHSAITLLPAEPMYPVLVDGKFVG
HISQSQASYVEQQLRVLKVSDDIRVPSCAEIILVEKSIDPINILVQYPGLYIFTEPGHLM
RPVKYLPSDRVEFIGTFEQVYLSICIDPEEAEPNVTMHQEIHPSCLFSFAANLIPFPDHN
QSPRNVYQCQMGKQTMGTPVHAWNYRADNKMYRLQFPQNPIVKPEPYEKYGIDEYPLGTN
ACVAVISYTGYDMEDAMVINKSSYERGFAHGSVIKVERVNLTEGRSAECPIFLCDPENPQ
KTIDLDGLPIPGRLYMEGDPYYSVYDIDTNSYKIHKYKYAEAAFCGSVRIVEEGENVGAN
KGKCHALIQWRTRRNPIIGDKFASRHGQKGINSFLWPTESMPFSESGMVPDIIFNPHGFP
SRMTIGMMIESMAGKAGAMHGSTYDSSPFVFNEKKTAIDHFGQLLVRAGYNYYGNETMYS
GVDGREMEVQIFFGIVYYQRLRHMIADKFQVRSTGPTDPVTLQPVKGRKKGGGIRFGEME
RDAMIAHGAAFTLQDRLFNCSDRDIAHICARCGSMISTLRCSKMLPEHRNSENSVLNYSE
REMCLLCGKDDEVCPVEVPRVFRYLVAELAAMNVRLQISVKHPANLSL
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggactgtgacattgcttcatatcatgtggaatcattcgattatttggcggaacaagga
gtgcatttggctgctttagatgtaccagcagaaaaattccgacttccaactggagaagct
gtggaattacgctataccggtgcccagcttggttatccaatgattgagatgaaacagggt
tctgctgttgattcgttaaaactatttccttcagagtgcagacaacgtggcttaacatat
agagggccattgaaagtaaatatagaaatatgcctgaatggtgctaagatggatttttgt
gaagttattgttggtgaggttcccattatgttgaaatcaaacagatgccatttgcgttgg
ttaacaagagagcagctaatagcacatggtgaagaaggaactgaaaaaggcggctatttc
atttgtaaagggaatgaaaaggtcatacgtcttttggttgcaaatcgtcgcaattatccc
ataggattagtaaggcattcctttcgtgaaaaaggatctttatttacacaatatggggtg
atgattcgatgcgtccgaggaaattattcagctgctatgatgacgcttcattatctcgag
agtggtaccattgttattgctttgcagtaccgacgtgaattattttatttgccgttcatg
tacgtcatcaaatcattaacatcgatgaatgatcaatgcattatggagcatatgattagg
tgtcgacccggtgatcatttttggaaaggatgcgtaactacgatgttagcactatgcagc
gatgatggtatagtgaatcaaaaagcagcactcactgctattggtgaaaggttccgagta
gccactcaggatcgtgttggtccgtgggaagtttctgaagatgttggtcgtttcttgctt
cgcgtttgtgttgcaatacatttggacaacgatgaagataaattcttcctcctttcgtat
atggctcaaaaattgatagcattgacgaaaggtgaatgtgctgccgaatcgccggataat
ccacaatttcaagaagctgctgtatccggtcatatacttcttttgattatacgagaacgt
ttggaaaatactttgaatattgcacgaagaaaaattgaacttgaggctaaacgcaaagca
gaaagtttccttttatcgagtcatgaattgattcgtgcgatgggtacgcagcggtcaggg
gaaataacacgaggtctggagtatttccttgctaccggaaatctaatttccaggggaggc
ttaacattacaacaaaacaatggattttcggtgattgccgaaagaattaatcaacttcga
tttgtttcccattttcgagcaattcatcgaggtgcatttttcatggaaatgcgtaccaca
gatgtacgtaaattacgtcccgaagcttggggtttcatatgcccagtacatacccctgac
ggtgctccatgtggtctattaaatcacgttgcggcaagtgtacgcattgttacgcattat
tcgaatactagtgaactgccaaaattgctcggagagttagggatggttggtcattccgct
atcacattactgcctgcagaacctatgtatcccgttttggttgatggaaaatttgttggc
catatctcgcaatcacaggcatcatatgtcgaacaacagttacgtgttttgaaggtatca
gatgatattcgtgtgccttcttgtgctgaaataattttagtagaaaagtccattgatccg
attaatattttggtgcaatatcccggtttgtacatatttactgagcctggacatctcatg
cgacccgtcaaatatcttccatcagatcgagttgaattcataggaacattcgagcaagtg
tacttatcaatttgtatcgacccggaggaggcagagcccaatgtaacgatgcatcaagaa
attcatcccagctgtttatttagttttgctgctaacctaataccatttcctgatcataat
cagtcgccaaggaatgtttatcaatgtcaaatgggtaaacaaacaatgggaacacctgtt
catgcatggaactatcgagccgacaataaaatgtatcgtcttcagttccctcaaaatcct
atcgtaaaaccagaaccatatgagaaatatggtattgatgagtatccgctgggaacgaat
gcatgtgttgcagtcatatcatacacaggttatgatatggaggatgctatggtaattaat
aagagctcatatgaacgtggttttgctcatgggagtgttattaaagtagaaagggtgaat
ctgacagaaggacgatccgcagagtgcccaatatttttgtgtgatcctgaaaatcctcaa
aagacgatagatcttgatggtttaccgattcctgggcgtttatatatggaaggtgatccg
tattattcggtgtacgacattgatacaaacagttataaaatccataaatacaaatacgca
gaagcagcattctgtggatcggtaaggattgtcgaagagggggagaacgtcggagcaaac
aagggcaaatgtcatgcattgattcagtggcgtacacgacgtaatccgataattggtgac
aaatttgcatcacgacatggtcagaaaggtatcaattctttcttatggcctactgaatcg
atgccattttcggagtcaggaatggttcctgatattatttttaatccgcatggttttcca
tctcgaatgacaattgggatgatgattgaaagtatggctggtaaagcaggagctatgcat
ggttctacatatgactcttcaccatttgttttcaatgagaagaaaacagccattgatcac
tttggacaacttcttgttcgtgcaggatataactattatggaaatgaaacgatgtattct
ggtgtggatggccgggaaatggaggttcaaatttttttcggaattgtatattatcagcgc
ctgagacatatgattgcggataaattccaagtacgatcaaccggcccaacagatccggtg
acgttacagccagtgaaaggtcgtaagaaaggtggtggaattcggtttggtgaaatggaa
cgtgatgcaatgatcgctcatggagctgcgttcactttgcaggatcgtctttttaattgt
tccgaccgagatattgcgcatatttgtgcgcgttgcggttcaatgatatcgacgcttcga
tgttcaaagatgctaccagagcatcgaaatagcgaaaattcagttttaaactacagtgaa
cgtgaaatgtgtttgttatgtggcaaggatgatgaagtttgtccggttgaagtgcctcgg
gtgtttcgttatttggttgctgaacttgcagcaatgaatgtccgcctgcagatttcagtg
aagcatccggcgaacttgtccctgtaa
DBGET
integrated database retrieval system