Candidatus Lokiarchaeum ossiferum: NEF87_003640
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Entry
NEF87_003640 CDS
T09593
Name
(GenBank) Ribulose bisphosphate carboxylase large chain
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
lob
Candidatus Lokiarchaeum ossiferum
Pathway
lob00630
Glyoxylate and dicarboxylate metabolism
lob01100
Metabolic pathways
lob01110
Biosynthesis of secondary metabolites
lob01120
Microbial metabolism in diverse environments
lob01200
Carbon metabolism
Module
lob_M00968
Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NEF87_003640
Enzymes [BR:
lob01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
NEF87_003640
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
UYP47355
LinkDB
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Position
complement(4262540..4264207)
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AA seq
555 aa
AA seq
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MVKIENWVVFPEKVELPIITCDLYEAYGLATPKIELIDEKMRVRLGPYLLDPEIPFNFED
FRKSCIIMYVSISPKLRKGWSVEYGLLRAALEIAAEESTGTWDPELKTLLPEEMDENSKA
NMKILEAKVIGLNAKNGMAAVALPKEGFEKGNLPQILSVVMGNYTGMASAAWGVRLEDID
IPDDFANSFIGPTIGNEGIKKILGNKITVGTIVKPKTGLSEADWAKTSTRSFYGGLDVVK
DDENLTSQDYCTFEERAKLVMKGINEIHEKTGRNLVYVANITHGDMDEMIKRADLIKSLG
GNCLMLDILATGMTGVQTIRKKYPEMILHGHRAGHGAQTIFPELIIDGERIDLRHGISMK
VWALIARLGGIDQFHIGAPKGKMESSYHTVLENLETCLRPLGNIKTMRPICSGGLKATVL
WDVATIMNPIGDTPNLDFIAQAGGGTHSHPLGTIGGSRSMVQARDSISAGDSPQVAMGKY
FETLLAFRRWDNEIYGNWLKTLTADSKIVVDPDERPYFLTENHPETAPKPVDLKTAMEKF
PELRADLEKFSPTLL
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaatagaaaattgggtagtttttccagaaaaggttgaactaccaataattaca
tgcgacttatatgaagcctatggattagcaactccaaaaattgaattgatcgatgaaaaa
atgcgagttagattgggaccctatttattggacccagaaattccctttaattttgaagat
tttcgtaaatcttgcatcattatgtatgtatcgattagtccaaaacttcgaaagggatgg
tctgtagaatatggattacttcgcgcagctttggaaattgctgctgaagaaagtaccggt
acatgggatccagaattaaaaacactcttacccgaagaaatggatgagaattccaaagcc
aatatgaaaattttagaagcgaaagtcataggattgaatgctaaaaatggtatggcggca
gtagcacttcccaaagaaggatttgaaaaaggaaacctccctcaaattttaagcgtagta
atgggaaactataccggaatggccagtgctgcttggggtgttcggcttgaggacatagat
attccagatgattttgcaaactcctttattggacccacgattggaaacgaaggaataaag
aaaatattggggaataaaattacagttggtaccatagttaaaccaaaaacaggccttagc
gaggcggattgggccaaaacatcaacacgatctttttatggaggattggatgttgtaaaa
gatgatgaaaacctcacttcacaagattattgcacgtttgaagaacgcgctaaattggtg
atgaaaggaatcaatgaaatacacgaaaaaacaggaagaaatctcgtgtatgtcgccaat
attactcatggtgatatggatgaaatgataaaacgagcagatctaattaaatcattagga
ggtaattgtttaatgttagatattctcgcaacaggaatgacaggagtccaaaccattcga
aaaaaataccctgaaatgattttacatggtcatcgagcaggacatggagctcaaacgatc
tttccagaattaattatagacggtgaacgaatcgatttaagacatggtatttccatgaaa
gtctgggctttaattgcacgcttaggaggaattgatcagtttcacattggagcacccaag
ggaaaaatggaatcttcttatcatacggttttagaaaacttggaaacttgtttgcgacct
ttagggaatattaaaactatgcgaccaatttgttcagggggattaaaagcgactgtctta
tgggatgtagcaaccataatgaacccaattggagatacaccaaatttagatttcattgcc
caagcgggaggaggtacccattcacaccccttaggcacaattggaggctcccgatcgatg
gtacaagctcgagactccatttcagcgggagattccccacaagttgcaatgggcaaatat
ttcgaaactttgctcgccttcagaaggtgggataatgaaatatatggaaattggttaaaa
actttaactgcagattcaaaaattgtagttgatcctgatgaacgaccgtacttcttgaca
gaaaatcaccccgaaactgctccaaaaccagtggatctaaaaactgctatggaaaaattt
ccagaattacgagcggatctggaaaaatttagcccaactctcctgtaa
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