Candidatus Lokiarchaeum ossiferum: NEF87_004046
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Entry
NEF87_004046 CDS
T09593
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
lob
Candidatus Lokiarchaeum ossiferum
Pathway
lob03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lob00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NEF87_004046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lob03021
]
NEF87_004046
Enzymes [BR:
lob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NEF87_004046
Transcription machinery [BR:
lob03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
NEF87_004046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-ProteinID:
UYP47761
LinkDB
All DBs
Position
4719040..4719996
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AA seq
318 aa
AA seq
DB search
MDEKPENVSKNPIVKIESLFFFIVIPTELIPVKIDVFERIQNKNLDIVRFVLDGVGVELA
NAFRRIVLTDVPSMAITEVLFIENDSVLYDEMIAHRLGLIPITSDLKNYNLPEECSCGGQ
GCTLCQAQLMAEVHADNGERTVYSGDLESMDPKIHPVNGDFIIGKLGKKSSLVFEAYAQL
GRGKEHAKFQPVCSIGYKYYPDVVIDNSLFSSEEEIDEVIKKDHTQLFQKVDGKLVLPEN
YWQGPDFTGSCEKYCPPGAVKVNYVPNKFVFTVEGSGAVPLKEIFAKAVEVFLEKVDEFE
DQLSNIQITQKVIAKYEN
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
gtggacgaaaagcccgaaaacgtttccaaaaatcctatcgttaagatagaatccttattt
ttttttatagttattcccaccgagttgatccccgtgaaaattgacgtttttgaaagaatt
caaaataaaaacttagatattgttcgttttgtgttagatggtgttggtgtcgagcttgca
aatgcctttcgcaggatagttttaactgacgttccaagtatggcgattacagaagtcctt
tttattgaaaatgatagtgttctttatgatgagatgattgctcatcggttaggattaatc
cccatcacatcagatttaaaaaattataatctacctgaagaatgttcctgcggcggtcaa
gggtgcactttgtgtcaagcccaacttatggctgaagttcatgctgacaacggtgaacgg
actgtatattctggtgatttagaatcaatggatccaaagattcatcctgtcaatggtgat
tttataatcggaaagttaggaaagaaatcttctttggtatttgaagcctatgctcaactt
ggacgtggtaaagaacacgctaaattccaacctgtttgctccatcggatacaaatattat
cctgatgttgtgattgataattcgttattttcctcagaagaagaaattgatgaagtaatt
aaaaaagatcacacgcaattattccaaaaagttgatggaaaattggtcttacctgaaaat
tattggcaaggtccagattttactggatcttgtgaaaaatattgcccacctggtgcggtt
aaagtgaactatgtaccaaataaatttgtgtttaccgttgaaggttcgggtgcagtaccc
ttaaaagaaatttttgccaaagctgttgaagtatttcttgaaaaagtggatgaatttgaa
gatcaattaagcaatattcaaattacccaaaaagttatcgcaaaatatgagaattaa
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