Lepisosteus oculatus (spotted gar): 102685523
Help
Entry
102685523 CDS
T07349
Symbol
vprbp
Name
(RefSeq) protein VPRBP isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
loc
Lepisosteus oculatus (spotted gar)
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
loc01001
]
102685523 (vprbp)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
loc04121
]
102685523 (vprbp)
Enzymes [BR:
loc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
102685523 (vprbp)
Protein kinases [BR:
loc01001
]
Serine/threonine kinases: Other
Other
102685523 (vprbp)
Ubiquitin system [BR:
loc04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
102685523 (vprbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LisH
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
102685523
NCBI-ProteinID:
XP_006631057
Ensembl:
ENSLOCG00000013471
LinkDB
All DBs
Position
LG5:complement(43471909..43495876)
Genome browser
AA seq
1523 aa
AA seq
DB search
MSYGLAMASASASASASDSVDSKAELSSLLEQWEREQQGSTQDLVSILTKISELIERETE
EYHKADPDPFDDRHPGRADPECMLGHLLKILFKNDDFMNALVNTYVMTSRELSLNTAACR
LLQNIMPGLETAVVFQEKEGIVEKLFKWAQEAEQPLRTYATGLLAGAMENQDIAANYREE
NSLLVPLMLQRLRELQEKDAESRQEFKRPSPRKALEPLLPLDEEAVDGEFNDTALDGQEE
KEGLEDSDVEFHLNSRHKTSSRVSSTVKPELDEADGKKNTSVKKTERENGRKAKQKLNFS
ISEPERIFSELSNSSWSEMSPWVIGTNYHLYPLTPAIEQRLILQYLTPLGEYQELLAVFM
QLGARELLMYYIDLKQTNDVQLTFEALKYLASLLLHKKFAAEFVAHGGVQKLLEIPRPSM
AATGVSLCLYYLAYNQDAMERVCMLPHSILSDVVGYTLWLLECSHASGGCHATMFFSISF
SFRAVLELFDKQDGLRRLVNLMSTLEILNLEDQGALLSDDEIFSSRQTAKHTCMALRRYF
EAHLAIKVEQVKQSLQRTEGGAPVHPQPYYKACTYTHDQVVEMMEFLIEYGPVRLYWEPA
EVFHKLSCIQLMLQLISIACDWRTYYGRSDTVRYALDVLAILTVVPKTQLLLAEPVDVLD
ESGSTVSTVGMSIILGVAEGEVFVNDAEIQKSALQVVINCVCAPDKRISSIGKFISGTPR
RRMPQNNKCTENVLTKMWNVVQSNNGIKVLLSLLTVKMPITDADQIRALACKALVGLSRS
GTVKQIISKLPLFSSGQIQQLMKEPVLQDKRSEHVKFCKYAAELIERVSGKPLLIGTDVS
LARLQKANVVAQSRISFPEKELLLLIRNHLVTKGLHDTASALTKEADLPMAIHSHSSSAF
SPVAVAPASSPAVLPRTPRLPNGVTSRIASHSSISATPSSSHGQVRPSTSQTQPPAAAPH
SNGSPLIGRIVFTRERPSPCNSKKPRVLRQKSDHGAYSQSPAMKKQLDRHLPSPPTLDSI
ITEYLREQHARCKNPVTTCPPFSLFTPHQCPEPKQRRQAPTNFTSRLTHRVVYPKYGGVD
GGCFDRHLIFSRFRPISVFREADEDESGFMCCAFSARERFLMLGTCTGQLKLYNVFNGQE
EASYSCHNSAITHLEPSRDGSLLLTSASWTYPLSALWGMKSVFDMKHSFLDDHYVEFSKL
SQDRVIGTKEDIAHIYDIQSGQKILTLHNTDLANNYKRNCATFNPTDDLVLNDGVLWDVR
SAQAIHKFDKFNMNISGVFHPNGLEVIVNTEIWDLRTFHLLHTVPALDQCRIVFNNSGTV
IYGAMLQADDEDDMMEQQMKSPFGSSFRTFDATDYKPIATIDVKRNIFDLCTDTKDCYLA
VIENQDSMNMDTVCRLYEVGRQRLAEEEEDEEDQEDEDQEDDDDDDEDSDDDLDDMDTDP
LLAELENENGGEEEEEEDGEQDLSPSDDEEVTRMLGEDGEDGEEDEDDDDSDDNEDDVEL
ILENSDSSDYSDLEDDIILSLNE
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacggcttggccatggcttcggcttcagcatcggcgtcggcttctgacagcgtg
gattccaaagcagagctgtcctccctgttggagcagtgggagagggagcagcagggcagc
acacaggacctggtcagcattctcaccaaaatctctgagctcattgagcgagaaacagag
gaatatcataaagctgaccctgatccttttgatgacaggcatcctggaagagcagatcca
gagtgcatgttgggacatttacttaaaatccttttcaagaatgatgactttatgaatgcg
ttggtaaacacgtatgtgatgacaagccgtgagctgtctctgaacacggctgcctgtcgt
ctcctccagaacatcatgccaggtctggagactgctgtcgtgtttcaggaaaaggagggc
attgtggagaagctatttaagtgggcccaggaagccgagcagcctctgaggacctacgcc
actgggctcctagctggagccatggagaaccaagacatagctgccaactacagggaagag
aactcactgctggtgcccctcatgctgcagcgattacgtgaactccaggagaaggatgca
gagagcagacaggagttcaagcggccgagcccgaggaaggctctcgagccattgctgccc
cttgatgaggaggcagtggatggggaatttaatgatacagctctggacggtcaggaggag
aaagagggcctggaagacagtgatgtggaatttcacctgaactctcgccacaaaaccagc
agccgggtcagctccactgtcaagcccgagctggacgaagctgatgggaaaaagaacaca
tctgtgaagaagacggaacgggagaatgggaggaaagcaaagcagaaactgaacttctcc
atttcggagcctgaaaggattttcagtgagctctccaacagcagctggtctgagatgtcc
ccctgggtgattgggaccaactatcacctttaccctctgaccccggccatagagcagaga
ctgattctgcaatatttaacccctctaggggagtaccaagagttgctggcagtgtttatg
caacttggggctcgggagctgctcatgtactacattgatcttaagcagaccaacgatgtc
cagttaacgtttgaggctcttaagtatttggcctccctgctccttcacaagaagtttgct
gccgagtttgtagcccatggtggtgtgcagaaattactggaaatccctcgaccctccatg
gctgctacaggcgtctctttgtgtctttattacctagcctacaatcaagatgcaatggag
agagtgtgcatgcttccccacagtatcctctcagatgtggttggctacactctctggctg
ctggagtgctctcatgcctctgggggctgccatgccaccatgttcttctccatctccttc
tccttccgtgctgttctggagctctttgacaaacaggacggcctgaggcgccttgtgaac
ttgatgagtaccctggagattttgaacctagaggatcagggagccttactgagtgatgat
gagatcttctctagtcggcagaccgcaaagcacacctgcatggctctgcgcaggtacttt
gaggcacacctggctatcaaagtagaacaggtaaagcagtccctgcagcggacagaggga
ggtgctcctgttcacccacaaccatactacaaggcatgcacatatacccacgatcaggtg
gtagagatgatggagtttctaatagagtatggccctgtgcgactgtactgggaaccagct
gaggtcttccacaagctgtcctgcatccagctaatgcttcagctcatctccatagcctgt
gattggagaacctactatggaaggagtgatacagtgaggtatgccctggatgtccttgcg
attctcactgtggtccctaaaacgcagctccttctggctgagcctgtggatgtactggat
gagagtgggtcgactgtttccactgtgggtatgagtataatcctcggcgttgcagaagga
gaggtgtttgtgaacgatgcagaaatccaaaaatcagccctgcaggtggtgatcaactgc
gtatgtgctccagataagaggatctccagtatcggcaagttcatctcggggacaccacga
cgccggatgccacaaaacaacaagtgcactgagaatgttctcaccaagatgtggaatgtg
gtacagtctaacaatggcatcaaggtccttctctctctccttactgttaagatgcccatc
actgatgcagaccagatcagggcactagcctgcaaggctttggttgggctgtcccgcagt
ggcacagtgaagcagatcattagcaagctgcctctcttcagcagcgggcaaatccagcag
ttgatgaaggagcctgtgctgcaggacaagcgcagtgagcatgtcaagttctgcaagtat
gctgccgagctcatcgaacgcgtgtcagggaagccgctgttgattggcacagatgtctcc
ctggccaggctgcagaaagccaacgtggtggcacagtctcggatctccttccccgagaag
gagctcctgctactcattaggaaccaccttgttaccaaaggattacatgacactgcctct
gccctgaccaaagaggctgatcttccaatggccatacactctcattcctcctccgctttc
agtcctgtagcggtagcacctgcctcctccccagcagtgctgcctcgaactcctcgtctg
cctaatggagtgacctcgcgtatagccagccactcctccatctctgccaccccatcctcg
agccacggccaagtccggccctctacctcgcagacacagccacctgctgcagccccccac
agcaacggctcgcctctgattggccgtatagtcttcacacgggagcgcccatccccttgc
aacagcaagaaaccgagggtccttcggcagaagtcggaccacggggcctacagccaaagt
ccagccatgaagaaacaactggaccgtcacctgccttctccccccaccctggacagcatt
atcaccgaatacctccgggagcagcatgcccgctgcaagaaccctgtcacgacttgcccg
cctttctccctcttcactccacaccaatgccccgagcccaagcagagacgccaggccccc
acaaatttcacctcccgcctcactcacagggtggtctaccccaagtatggaggggtggat
ggaggttgctttgacagacatctcattttcagtcgattccgtccgatctcggtgttccgg
gaagcggatgaggatgagagtggcttcatgtgctgtgcgttttctgctcgggaacgattc
ctgatgcttgggacttgcactggccagctaaagctctacaatgtcttcaatggccaggag
gaagccagctacagctgtcacaactctgccattactcaccttgagccctcccgggacggc
tctttgttgctaacgtcagcctcttggacctatcctctctctgctctctggggtatgaaa
tcggtctttgacatgaagcattcctttttagatgatcattatgtagaattcagtaaactt
tctcaagatcgagtcattggcactaaggaagatattgctcatatctacgacatccagtct
ggtcagaaaatcctcactttgcacaatacagatcttgccaataactataagaggaactgt
gcaactttcaatcctacggatgacctggtgttaaatgatggggttttatgggatgtgcga
tctgcacaggctatccataagttcgacaaattcaacatgaacatcagtggagtcttccat
cccaatggactagaggtcattgtgaacactgaaatttgggacctgagaaccttccatctt
ctacacacagtccctgcactagaccagtgcagaattgtcttcaataacagtggcacagtt
atctatggagcaatgctgcaggcagatgatgaggacgacatgatggaacaacaaatgaaa
agtccctttgggtcttccttcaggacgtttgatgccacagactacaaacccatcgcaaca
attgatgtgaagagaaatatttttgacctgtgtactgacaccaaagattgctatttggct
gttattgagaatcaggattccatgaacatggacactgtctgtcggctctatgaggtggga
aggcaacggctggctgaggaagaggaggacgaggaagatcaggaagatgaggaccaggag
gatgatgatgacgacgatgaagactctgatgatgatctggatgacatggatacagaccct
ctcctagcagaactggagaatgaaaatggtggtgaggaggaagaggaggaagatggagag
caggacttgtctccttctgatgatgaggaggtgacgcgcatgctgggggaagatggggag
gatggtgaggaggatgaagatgatgatgactcagatgataatgaggatgacgtggagcta
atcttggagaattcggacagctcggattactcagacttggaagacgatattatcttatct
cttaacgaatga
DBGET
integrated database retrieval system
