Lepisosteus oculatus (spotted gar): 102687990 Help Entry 102687990         CDS       T07349                                  Symbol msh6 Name (RefSeq) DNA mismatch repair protein Msh6   KO K08737   DNA mismatch repair protein MSH6 Organism loc  Lepisosteus oculatus (spotted gar) Pathway loc03430   Mismatch repair Brite KEGG Orthology (KO) [BR:loc00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     102687990 (msh6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:loc03400]     102687990 (msh6) DNA repair and recombination proteins [BR:loc03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      102687990 (msh6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I PWWP MutS_IV MutS_II MUM1-like_PWWP Motif Other DBs NCBI-GeneID:  102687990 NCBI-ProteinID:  XP_015218440 Ensembl:  ENSLOCG00000016298 LinkDB All DBs Position LG16:complement(12207097..12217718) Genome browser AA seq 1354 aa AA seqDB search MAKQSNIFKFFTKSPPISSKQKTNASPVEADLPSAVRKSNTSPKEEAKQASSASSKKAPA KSSKTTVKAGVSKLFAEKKPAVKESESCQFRAGALVWAKLEGHPWWPCLVYPHPVSGEQL RGRGQAQRLHVQFFDEPPSRGWVSTKYIREYEGSDSSDAKVGGTFFSGKPVIRRAMEMAD SAMKDDPGKRLQLAVCTEPSDDEDEEEMEVDKSSDSDEEEVKPSRRTKRRSQESEQKTKR RRITVASDSENSDEEFRPEEAEASSDEASSSGVDEHEVSEPETESEPESPVKPVKRKREP ERASKMGSSSETPKRSPSVSVDTRSRLSAFSAPETFESQTSSGGAAGSGATVWDHEKLDW LQDGKRKDAKRRKQTDPDYDPCTLFVPEDFFNKATPGMRRWWQLKSEMFDAVLFYKVGKF YELYHMDAVIGVNELGLTFMKGTWAHSGFPEIGFARFSDVLVQKGYKVARVEQLETPEMM EARCKSMVRPTKFDRVVRREVCRVITKGTQTYSVLDGAPSESHSKYLLCIKEKAVEETSG CQHTYGVSFVDTSVGKFYVGQFQDDRHCSRFRTLVAHYNPAQVLFEKGNPSAETRKILKA SLASAMQEGLHPGSQFWDASKTLKVLAEEDYFKENGTKNGDAKETLPAVLRAMTSESDTL GLTPGEGYELALSALGGCVFYLKKCLVDQELLSMGKFEEYVPLDVEMNQAGGSTSFFAKT QQRMVLDGVALTNLEILQNAATGTAEGTLLERLDTCCTPFGKRLLKQWLCAPLCNPFSIS DRLDALEDLMAVPDKMAESTELLKKLPDLERLLSKIHSMGSPLKSKDHPDSKAILYEETT YSKRKIADFLSALEGFKIMQQIISAFQPAVKDFRSKLLRQVVTFKAESEEGLFPDLSGEL NRWDTAFDHQKARNTGIITPKSGFDPEFDQALIGIKQTEASLQEYLDRQRKRLGCKAIVY WGTGRNRYQMEIPDSVTDRYVPEDYEVKSTKKGCKRYWSKDIERLLGDLVSWEEKRDGAL KDCMRRLFYNFDKNHKDWQTAVECMAVLDVLLCLARYSQGGDGPMCRPDVLLPEDSGSQP FLLLSGSRHPCIAKTFFGDDFIPNDVCIGCAGGEEGEDGQASCVLVTGPNMGGKSTLMRQ CGLVVILAQLGCYVPAESFKLTPVDRVFTRLGASDRIMAGESTFFVELSETASILHHGTC HSLVLLDELGRGTATYDGTAIASAVVKELAANIKCRTLFSTHYHSLVEDFSHYPAVRLGH MACMVENECEDPSQETITFLYKFICGACPKSYGFNAARLANIPEDVIQTGHRKAKEFERT TTSLRIFKQLCSFAEDVNADSICFSTLMKKMIAV NT seq 4065 nt NT seq  +upstreamnt  +downstreamnt atggccaagcagagcaatattttcaagttctttactaagtcaccacctatttccagtaag cagaagactaacgcgtctcctgttgaagcggatctaccgtctgcggtgcgcaaatctaac acttcccccaaagaagaagcgaaacaagcaagttctgcaagcagcaagaaagccccggcg aagtccagcaaaacaacagtgaaagctggggtcagtaagctttttgcagagaaaaagcct gcagttaaagaaagtgagtcgtgccagttccgcgcgggggctctggtatgggcgaagctg gaggggcacccctggtggccgtgcctggtgtacccccaccctgtgagcggggagcagctg cggggacgaggccaggcgcagcgcctgcacgtgcagttcttcgacgagccccccagcagg ggctgggtcagcacaaagtacatccgggagtatgagggctcagactccagtgatgcaaag gtgggtggcacgttcttcagtgggaagccggtgatccggagggcgatggagatggcagac agtgccatgaaagacgacccagggaagagattgcagcttgcggtgtgcacagagccctct gacgatgaagacgaggaagagatggaggtggacaaatcatcagacagcgatgaggaggag gtgaagcccagccggaggaccaagaggaggagtcaggagtctgagcagaagaccaagagg cgccggatcacggtggcgtcggacagcgagaactcggacgaagagttccggcccgaggag gcggaggccagcagcgacgaggccagcagcagcggggtggacgaacacgaggtcagcgaa ccggaaacggagtccgagccggagagccccgtcaaacccgtcaagcgcaagagggagcct gaaagagcctcgaagatgggcagttcctccgagacgccaaagagatccccgtccgtgtct gtggataccaggtccaggctgtcggccttttctgctccagagactttcgaaagccagaca agttctgggggagctgctggcagtggcgccacagtctgggaccacgaaaaattggactgg cttcaggatggcaaaagaaaagatgccaagagacggaaacagacagaccccgactatgat ccctgtactctctttgtcccagaggacttcttcaacaaagccactcctggcatgcgcagg tggtggcagctcaagtctgagatgtttgatgctgtgcttttctacaaagtgggtaaattc tatgagctgtaccacatggatgctgttataggggtgaacgagctagggctgaccttcatg aagggtacctgggctcactccggcttccctgagattggatttgctcgcttctctgatgtt ctcgtccaaaaggggtacaaagtggcaagagtggagcagctggagaccccagagatgatg gaggctagatgcaaaagcatggtacgtcccactaagtttgacagggtggtgcgcagggaa gtgtgcagggtgatcaccaaaggcacccagacctacagtgtcctggatggtgcaccttca gagagccacagcaagtacctgctgtgtatcaaggagaaggcggtagaggagacctctggg tgccagcacacctacggggtgagtttcgtggacacttcggtgggcaagttctacgtaggt cagtttcaagacgatcgccactgttcccgtttcaggactctagttgcacactacaatcca gctcaagtgctttttgaaaagggaaacccctccgccgaaactagaaagattttgaaagct tccctggcttctgccatgcaggagggtttgcatcctggatctcagttctgggatgcttct aaaacactaaaagtcctcgctgaggaggactactttaaagagaacggtacaaaaaatgga gatgctaaggagacactgcctgctgtgctcagagccatgacctcggagagtgacactctg ggcctcacacctggggaggggtatgagctggccttgtctgcgcttggcggctgtgtgttc tacctgaagaagtgtctggtggaccaagagctgctgtctatgggtaaatttgaggagtat gttccccttgatgtggaaatgaaccaggctgggggatccaccagcttctttgccaagacc cagcagcgcatggtgttagatggtgttgcactgactaacctggagatcttgcagaatgca gcaacaggcacagcagagggcaccctgctggagaggctggatacttgttgcacacccttt ggtaaaaggctcctgaaacaatggttatgtgctccgctgtgcaatcccttctccattagt gaccgactggatgccctggaggatctcatggctgtccctgacaaaatggcagaatctact gagttgttaaagaagcttcctgacctggaaagactactgagcaagatccatagcatgggc tctcccctgaaaagcaaagatcaccctgacagtaaggccatcctgtacgaggagactacc tatagcaagcgtaagattgcagacttcctttctgccctagaaggcttcaaaatcatgcag cagattatttcagcctttcagccagctgtgaaggacttccggtctaagctgctgaggcag gtggtcacctttaaagctgaaagtgaagaggggcttttcccagacctgtctggggagcta aacaggtgggacacggcctttgaccaccagaaggctcgcaacactggcatcataactccc aagagtggctttgacccagaatttgaccaggctctgattggaatcaagcaaacagaggcc tccctgcaggagtatcttgaccggcaacgcaaacgtctgggctgcaaggctatagtatac tggggcactggcaggaatcgctaccagatggaaattccagacagcgtcacggacaggtat gtgcctgaagactacgaggtcaagtccaccaagaagggttgcaagcgctactggagcaag gacattgagcgactgctgggggacttggtgagctgggaagagaagagggatggagcactg aaagactgcatgaggaggctcttctacaactttgacaagaatcacaaagactggcagact gcagtggagtgcatggcggtcctagatgtgctgctctgcttggcccggtacagtcagggg ggagacgggcccatgtgccgcccggacgtgctcttacccgaggactccggctcgcagccc ttcctcctgctgagcggctcccgccacccctgcatcgccaagacgttcttcggagacgac ttcatccccaacgacgtctgcattggctgtgctggcggggaggagggggaggacgggcag gcgtcctgcgtgctggttaccgggccgaacatgggtggcaagtccaccctcatgagacag tgtggtcttgtggtcattttggcccagcttggctgctacgttcctgcagagagctttaag ctgacaccagttgacagggtcttcactaggctgggagcatcggacaggatcatggcaggt gaaagtactttctttgtggagctaagtgagactgcaagcattcttcaccacggaacatgc cattcccttgtgctccttgatgaattaggaaggggcacagctacttatgatggaactgca attgcaagtgctgtggttaaagaactggcagcaaacatcaaatgtcgcactttgttttcc acccactaccactcccttgtggaagatttctcacactaccccgcagtgcgcctgggccac atggcatgcatggttgagaatgagtgcgaagacccaagccaggaaactatcacattcctg tacaaattcatttgtggagcctgcccaaagagctatggattcaatgctgccagactcgct aacatcccagaggacgtcattcagactggccataggaaggcaaaggaatttgagaggacc accacctcccttcggatttttaagcagctctgttcttttgctgaagacgtaaatgctgac tcaatttgcttctctacgctgatgaagaaaatgattgcagtttaa

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