Lepisosteus oculatus (spotted gar): 102691168
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Entry
102691168 CDS
T07349
Symbol
grin1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1 isoform X11
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
loc
Lepisosteus oculatus (spotted gar)
Pathway
loc04020
Calcium signaling pathway
loc04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
loc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102691168 (grin1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102691168 (grin1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
loc04040
]
102691168 (grin1)
Ion channels [BR:
loc04040
]
Ligand-gated channels
Glutamate (ionotropic)
102691168 (grin1)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
SIP
DUF6724
Motif
Other DBs
NCBI-GeneID:
102691168
NCBI-ProteinID:
XP_006640547
Ensembl:
ENSLOCG00000000420
LinkDB
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Position
LG21:complement(14715..42609)
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AA seq
901 aa
AA seq
DB search
MRLFLLAVFFSCSCARGGCEPKMVNIGAVLSQKRYEQVFKDAVTQANQLYGKEKFKMNAI
SVTHKPNAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDMMREFRWNHIILIVSDDHEGRAAQKRLETL
LEEKETKNKNRNYENLDQLSYDNKRGPKAEKVLQFNQDTNLTALLQEAKELEARVIILSA
SEEDAAAVYKAARHLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHIND
AVAVVAQSILELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPDGLTGRVEFNDD
GDRKFAHYSILNYQKSRLVQVGIYNGTQVVLNNQRKIIWPGGETEKPRGYQMSTRLKIVT
IHQEPFVYVKPTMHDGTCKEEHTVNGDLIKKVICTGPNETIPGRPIVPQCCYGFCIDLLI
KLAKTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
VAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQQYHPTDITGQLNLSDPSVSTV
V
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttgtttctgttggcggttttcttctcctgctcctgcgccaggggcggctgcgaa
cccaaaatggtgaatatcggggctgtcctgagccagaagaggtacgagcaggtcttcaaa
gacgcagtgactcaagctaatcaactgtacgggaaagagaagttcaagatgaatgccatc
tccgtcacccacaagccgaacgccattcagatggctctgtctgtatgcgaagacctcatc
tccagccaggtgtatgctatcctcgtgagccacccaccacagtctaatgaccacctgact
cccactccagtgtcctatactgctggcttctaccgcatccctgtggtgggactgaccacc
cgcatgtccatctactctgacaagagtatacacctgtcgttcctgcgcacggtgcccccc
tactctcaccaggcacatgtctggttcgacatgatgcgggaattccgctggaatcatatt
atcctgatcgtgagcgacgaccacgagggccgggcagcgcagaagaggctggagaccctg
ctggaagagaaggagaccaagaataaaaacaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacccaaggcagagaaagtccttcagttcaatcaagacacaaac
ttaacggcgctgctgcaggaagccaaggagctggaggcccgtgtcatcatcctctctgct
agtgaagaggatgctgctgcagtgtacaaagcagctcggcacctgaacatgaccggatcc
ggctacgtgtggctggtgggagagagggagatgtcaggaaaggctctcagtgaagcccct
gatgggctgattggcctccagctcatcaacgggaagaatgagtcagcgcacatcaacgac
gcagtggctgtggtggctcagtccatcctggagctcttcgagaaggagaacatcacggag
ccaccaaggggctgcgttggcaatacgaacatctggaaaacgggaccactcttcaaacga
gtactgatgtcctccaagtatcccgatggtctgacgggacgggtggagtttaacgatgat
ggggaccggaaatttgcccactacagcattctgaactaccagaaaagcaggctggtgcaa
gtgggcatatacaacggcactcaagttgtgcttaacaaccaaagaaagatcatctggcca
ggtggggaaacagagaagccacgagggtaccagatgtcaaccagactgaagattgttact
atccaccaagagccctttgtttatgtgaagcctacaatgcatgacggaacctgcaaggaa
gagcacacagtcaacggagacttgataaaaaaggtgatctgcacgggccccaatgagacc
atcccaggacgccccattgtgccgcagtgttgttatgggttctgcattgacctgctcatc
aaacttgccaagactatgaactttacctacgaggtccacctggtggctgatgggaagttt
ggaacacaggagcgggtgaacaacagcaacaagaaggagtggaatgggatgatgggagag
ctcctcagtggattagcagacatgatagtggctcctttgaccatcaacaatgaacgagca
caatacattgagttctccaagccattcaaataccaggggctgaccatactggtgaagaag
gaaatcccacgcagtactttggactccttcatgcagcccttccagagcacgttgtggttg
ctggtggggctgtcagtgcatgtagtggcagtcatgctctatctactagaccgattcagc
ccatttggacggttcaaagtgaacagtgaagaagaggaagaggatgctctgacattgtca
tctgctatgtggttctcttggggagtgctgctgaactcgggcattggagaaggggctcct
cgcagtttctcggcgcgcattctgggcatggtgtgggctggctttgccatgatcatcgtt
gcctcctacactgctaacctggctgctttcctggtgttggaccggccagaggagcgcatt
actgggatcaatgaccctcggctgcgcaacccttcggacaagttcatctacgccacggtg
aagcagagctcggtggacatctacttccgcaggcaggtggagcttagcaccatgtaccgt
cacatggagaagcacaactacgagagtgcggccgaggccatccaggctgtcagagacaac
aagctgcatgctttcatctgggactcggcagtgcttgagttcgaggcatcgcagaagtgt
gatctagtcacaactggagagctcttcttccgctccggctttggcatcggcatgaggaag
gacagcccctggaaacagaatgtctccctcgccatcctcagttctcatgaaaatggcttt
atggaagacttggacaagacatgggtcagataccaggagtgtgactcgaggagtaatgcc
ccagctacactcacctttgaaaacatggcaggagtcttcatgctggtggctgggggcatt
gtggcaggcatattcttgatatttattgagatcgcgtacaagcgccacaaggatgcccgc
aggaagcagatgcagctggcttttgctgcagtcaacgtgtggaggaagaacctgcagcag
tatcaccctaccgacatcacgggccagctgaacctctccgacccctcggtcagcactgta
gtgtga
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